FC920418

Overview
NameFC920418
Unique NameFC920418
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15452 contig Ccv1_Contig15452:3..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_PONAB (Catalase OS=Pongo abelii GN=CAT PE=2 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 9.123e-52
Identity = 99/182 (54.40%), Postives = 131/182 (71.98%), Query Frame = 2
Query:  128 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            A  +TT AG PV +  + +TVG RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRD + FP  IH+ K NP++H+++   + DF S  PESL   S+ F D GI
Sbjct:   24 ADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPLLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGI 205          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_HELPY (Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 9.123e-52
Identity = 100/178 (56.18%), Postives = 126/178 (70.79%), Query Frame = 2
Query:  140 TTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            TT  GAPVW+DN+ +T G RGPVLL+    +EKLA F RERIPERVVHA+G+ A G F  T DI+  T A +F   G +T    RFSTV  ERGS + +RDPRGFA+K+YT EGNWDL+GN+ PVFFIRDAIKFPD IH  K +P++++  +  + DF S++PESL   +W   D GI
Sbjct:    9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGI 186          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATX_BACSU (Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.191e-51
Identity = 100/184 (54.35%), Postives = 129/184 (70.11%), Query Frame = 2
Query:  137 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFEC-----THDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            +T   G PV ++ +  TVG+RGP  LE+Y  +EK++HF RERIPERVVHARGA A G+FE         IS  T A LF+  G +TP  VRFSTV H + SPETLRDPRGFAVK YT +GNWDL+GN++ +FFIRD +KFPD++HAF+P+P ++IQ+  RI DF S  PE+    ++ F   GI
Sbjct:   35 LTNRQGHPVTDNQNVRTVGNRGPTTLENYDFLEKISHFDRERIPERVVHARGAGAHGYFEAYGSFGDEPISTYTRAKLFQEKGKKTPAFVRFSTVNHGKHSPETLRDPRGFAVKLYTEDGNWDLVGNNLKIFFIRDPLKFPDLVHAFQPDPVTNIQDGERIFDFISQSPEATHMITFLFSPWGI 218          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_DANRE (Catalase OS=Danio rerio GN=cat PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.191e-51
Identity = 97/179 (54.19%), Postives = 128/179 (71.51%), Query Frame = 2
Query:  137 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            +TT AG P+ +  +++T G RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G  TP++VRFSTV  E GSP+T+RDPRGFAVKFYT EGNWDL GN+ P FFIRD +  P  IH+ K NP++H+++   + DF S  PESL   S+ F D GI
Sbjct:   27 LTTGAGVPIGDKLNAMTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHVGKTTPIVVRFSTVAGEAGSPDTVRDPRGFAVKFYTDEGNWDLTGNNTPTFFIRDTLLSPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGI 205          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_CANFA (Catalase OS=Canis familiaris GN=CAT PE=1 SV=3)

HSP 1 Score: 202.601 bits (514), Expect = 1.556e-51
Identity = 102/204 (50.00%), Postives = 137/204 (67.16%), Query Frame = 2
Query:   68 SSARNIAMDPYKLLPS--TTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            + +R+ A D  KL            +TT  G P+ +  + +T G RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDAI FP  IH+ K NP++H+++   + DF S  PESL   S+ F D GI
Sbjct:    2 ADSRDPASDQMKLWKEQRAAQKPDVLTTGGGNPIGDKLNVMTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGI 205          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 4.528e-51
Identity = 98/182 (53.85%), Postives = 129/182 (70.88%), Query Frame = 2
Query:  128 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            A  +TT AG PV +  + +T G RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRD + FP  IH+ K NP++H++    + DF S  PESL   S+ F D GI
Sbjct:   24 ADVLTTGAGNPVGDKLNVITAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPLLFPSFIHSQKRNPQTHLKHPDMVWDFWSLRPESLHQVSFLFSDRGI 205          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATE_RHIME (Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 5.913e-51
Identity = 102/190 (53.68%), Postives = 123/190 (64.74%), Query Frame = 2
Query:  125 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNP-------KSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            + P +TT  G PV +D +SL  G RGP L+ED+H  EK+ HF  ERIPERVVHARG    GFFE    ++  T ADLF+ PG +TP  VRFSTV   +GS +  RD RGFAVK YT+EGNWDL+GN+IPVFFI+DAIKFPDVIH+ KP P       +S    +W   DF S  PES+    W   D  I
Sbjct:   36 DTPVLTTAQGGPVADDQNSLRAGERGPTLIEDFHFREKIFHFDHERIPERVVHARGYGVHGFFETYESLAAYTRADLFQRPGERTPAFVRFSTVAGSKGSFDLARDVRGFAVKIYTKEGNWDLVGNNIPVFFIQDAIKFPDVIHSVKPEPDREFPQAQSAHDNFW---DFISLTPESMHMIMWVMSDRAI 222          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_RANRU (Catalase OS=Rana rugosa GN=cat PE=2 SV=3)

HSP 1 Score: 200.675 bits (509), Expect = 5.913e-51
Identity = 97/179 (54.19%), Postives = 129/179 (72.07%), Query Frame = 2
Query:  137 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            +TT  G PV +  + LTVG RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL GN+ P+FF+RDA+ FP  IH+ K NP++H+++   + DF +  PESL   S+ F D GI
Sbjct:   27 LTTGGGNPVSDKLNLLTVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEFIGKRTPIAVRFSTVAGEAGSADTVRDPRGFAVKFYTEDGNWDLTGNNTPIFFVRDAMLFPSFIHSQKRNPQTHMKDPDMVWDFWALRPESLHQVSFLFSDRGI 205          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_RAT (Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3)

HSP 1 Score: 200.29 bits (508), Expect = 7.723e-51
Identity = 95/179 (53.07%), Postives = 129/179 (72.07%), Query Frame = 2
Query:  137 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            +TT  G P+ +  + +T G RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDA+ FP  IH+ K NP++H+++   + DF S  PESL   ++ F D GI
Sbjct:   27 LTTGGGNPIGDKLNIMTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAMLFPSFIHSQKRNPQTHLKDPDMVWDFWSLCPESLHQVTFLFSDRGI 205          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_PSEPU (Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.723e-51
Identity = 100/179 (55.87%), Postives = 126/179 (70.39%), Query Frame = 2
Query:  137 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            +TT +GAPV ++ +S + G RGP+LL+D+HL+EKLAHF RE IPER VHA+G+ A G F  T DI+  T A LF   G QT   +RFSTV  ERGS +T RDPRGFAVKFYT EGNWD++GN+ PVFFIRD +KFPD IH  K +P+S+++      D  SH PE+L   +  F D GI
Sbjct:    5 LTTASGAPVADNQNSRSAGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVTRDITGYTSAKLFEQVGKQTETFLRFSTVGGERGSADTERDPRGFAVKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRHPQSNLKNAQIFWDSWSHSPEALHQVTILFSDRGI 183          
The following BLAST results are available for this feature:
BLAST of FC920418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_PONAB9.123e-5254.40Catalase OS=Pongo abelii GN=CAT PE=2 SV=3[more]
CATA_HELPY9.123e-5256.18Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2[more]
CATX_BACSU1.191e-5154.35Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1[more]
CATA_DANRE1.191e-5154.19Catalase OS=Danio rerio GN=cat PE=2 SV=1[more]
CATA_CANFA1.556e-5150.00Catalase OS=Canis familiaris GN=CAT PE=1 SV=3[more]
CATA_CALJA4.528e-5153.85Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]
CATE_RHIME5.913e-5153.68Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2[more]
CATA_RANRU5.913e-5154.19Catalase OS=Rana rugosa GN=cat PE=2 SV=3[more]
CATA_RAT7.723e-5153.07Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3[more]
CATA_PSEPU7.723e-5155.87Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32008B05EF RVDevelop1 Citrus clementina cDNA clone C32008B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920418 ID=FC920418; Name=FC920418; organism=Citrus clementina; type=EST; length=673bp
ACACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGATAA
TAATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCTAC
AAATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAATGC
CGGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAGAG
GTCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATTTT
GCCAGGGAGAGGATTCCAGAACGCGTCGTCCATGCTAGGGGAGCCAGTGC
TAAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCTG
ATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCC
ACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGG
ATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGTA
ACAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGTG
ATCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTGGAG
GATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCT
GGTTCTTTGATGATGTGGGTATT
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