FC920481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: STRE_STRGR (dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17 Identity = 65/213 (30.52%), Postives = 97/213 (45.54%), Query Frame = 2 Query: 26 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY----FTGSKDNLRKWIGHPRFELIRHDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG 637 +LVTG AGFIGS V L+ +VV + G+ DNL GHPR+ R D+ + ++ DQ+ HLA + + ++TNV GT +L A R G A + ST EVYG + W P+ S Y K + L +H HG+++R+ R N YGPR + +++ FI + G + + G Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDICDAPGRRVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQVSTDEVYGS-----LEHGSWTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSNNYGPRQFPE--KLIPRFITLLMDGHRVPLYGDG 210
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_SERP5 (Bifunctional polymyxin resistance protein arnA OS=Serratia proteamaculans (strain 568) GN=arnA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 63/222 (28.38%), Postives = 112/222 (50.45%), Query Frame = 2 Query: 23 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 R+L+ G GFIG+HL ++L+ +++ ++ +D GS D + +++G+PRF + D++ E + + D I L A+PI Y NP++ + + L ++ + RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G++ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 317 RVLILGVNGFIGNHLTERLLRDDRYDIYGLD---IGS-DAISRFLGNPRFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPSTSEVYGMCDDKEFDEDHSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQ 533
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_AERS4 (Bifunctional polymyxin resistance protein arnA OS=Aeromonas salmonicida (strain A449) GN=arnA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17 Identity = 64/222 (28.83%), Postives = 109/222 (49.10%), Query Frame = 2 Query: 23 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG--DPLVHPQDESYWGNVNPI-GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 R+L+ G GFIG+HL ++L+++ + E+ +D S L ++I HP F + D++ E + + D I L A+PI Y NP++ + + L ++ + RI+ STSEVYG D +DES V PI R Y K++ + +++ Y ++ G+ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 319 RVLILGVNGFIGNHLTERLLKDGRYEIYGLDI----SASALGRFIDHPHFHFVEGDISIHTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPSTSEVYGMCDDHSFDEDESRL-IVGPIHKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRPFNWMGPRLDSLDSARIGSSRAITQLILNLVDGTPIQLVDGGAQ 535
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_AERHH (Bifunctional polymyxin resistance protein arnA OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=arnA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 66/221 (29.86%), Postives = 109/221 (49.32%), Query Frame = 2 Query: 23 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDE-SYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 R+L+ G GFIG+HL ++L+++ EV +D GS + ++IGHP F + D++ E + + D I L A+PI Y NP++ + + L ++ + RI+ STSEVYG H DE S V PI R Y K++ + +++ Y ++ G+ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 319 RVLILGVNGFIGNHLTERLLQDGGYEVYGLD---IGSSA-VDRFIGHPNFHFVEGDISIHTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYHKRIIFPSTSEVYGMCDDHSFDEDSSRLIVGPINKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRPFNWMGPRLDSLDSARIGSSRAITQLILNLVDGTPIQLVDGGAQ 535
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_YERPY (Bifunctional polymyxin resistance protein arnA OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=arnA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 64/222 (28.83%), Postives = 112/222 (50.45%), Query Frame = 2 Query: 23 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F + D++ E + + D I L A+PI Y NP++ + + L ++ + RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G++ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 533
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_YERPS (Bifunctional polymyxin resistance protein arnA OS=Yersinia pseudotuberculosis GN=arnA PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 64/222 (28.83%), Postives = 112/222 (50.45%), Query Frame = 2 Query: 23 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F + D++ E + + D I L A+PI Y NP++ + + L ++ + RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G++ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 533
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_YERPP (Bifunctional polymyxin resistance protein arnA OS=Yersinia pestis (strain Pestoides F) GN=arnA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 64/222 (28.83%), Postives = 112/222 (50.45%), Query Frame = 2 Query: 23 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F + D++ E + + D I L A+PI Y NP++ + + L ++ + RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G++ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 533
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_YERPN (Bifunctional polymyxin resistance protein arnA OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=arnA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 64/222 (28.83%), Postives = 112/222 (50.45%), Query Frame = 2 Query: 23 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F + D++ E + + D I L A+PI Y NP++ + + L ++ + RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G++ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 533
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_YERPG (Bifunctional polymyxin resistance protein arnA OS=Yersinia pestis bv. Antiqua (strain Angola) GN=arnA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 64/222 (28.83%), Postives = 112/222 (50.45%), Query Frame = 2 Query: 23 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F + D++ E + + D I L A+PI Y NP++ + + L ++ + RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G++ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 533
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_YERPE (Bifunctional polymyxin resistance protein arnA OS=Yersinia pestis GN=arnA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 64/222 (28.83%), Postives = 112/222 (50.45%), Query Frame = 2 Query: 23 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F + D++ E + + D I L A+PI Y NP++ + + L ++ + RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G++ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 533 The following BLAST results are available for this feature:
BLAST of FC920481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920481 ID=FC920481; Name=FC920481; organism=Citrus clementina; type=EST; length=693bpback to top |