FC920482

Overview
NameFC920482
Unique NameFC920482
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig952 contig Ccv1_Contig952:6..731. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.542e-74
Identity = 133/154 (86.36%), Postives = 143/154 (92.86%), Query Frame = 3
Query:  270 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRN--GTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            MFIE+FKVESPNVKYT+NEI SVY+Y+TTELVHENR   G YQWIVKPKTV+Y FKTD  VPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKD +QQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+V  GWDISDMNLADA
Sbjct:    1 MFIESFKVESPNVKYTENEIESVYNYDTTELVHENRKDAGGYQWIVKPKTVQYHFKTDTRVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKIQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADA 154          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_SPIPO (Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.181e-71
Identity = 126/152 (82.89%), Postives = 139/152 (91.45%), Query Frame = 3
Query:  270 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            MFIE F+VESPNVKY D EI SVY YETTELVHE RNG+YQW+VKPK+V+Y+FKTD  VP+LGVMLVGWGGNNGSTLT GVIANREGISW TK+ VQQANYFGSLTQ+S+IRVGS+NGEEIYAPFKS+LPMVNPD+IV  GWDISDMNLADA
Sbjct:    1 MFIEKFRVESPNVKYGDGEIESVYSYETTELVHEVRNGSYQWVVKPKSVQYQFKTDTRVPRLGVMLVGWGGNNGSTLTAGVIANREGISWVTKEKVQQANYFGSLTQSSSIRVGSFNGEEIYAPFKSLLPMVNPDEIVFGGWDISDMNLADA 152          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 250.366 bits (638), Expect = 7.414e-66
Identity = 118/152 (77.63%), Postives = 134/152 (88.16%), Query Frame = 3
Query:  270 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            MFIE+F+VESP+V+Y   EI S Y Y+TTELVHE ++G  +W+V+PK+VKY F+T   VPKLGVMLVGWGGNNGSTLT GVIANREGISWATKD VQQANY+GSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDDIV  GWDIS+MNLAD+
Sbjct:    1 MFIESFRVESPHVRYGPMEIESEYRYDTTELVHEGKDGASRWVVRPKSVKYNFRTRTAVPKLGVMLVGWGGNNGSTLTAGVIANREGISWATKDKVQQANYYGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDIVFGGWDISNMNLADS 152          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 9.683e-66
Identity = 118/152 (77.63%), Postives = 134/152 (88.16%), Query Frame = 3
Query:  270 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            MFIE+F+VESP+V+Y   EI S Y Y+TTELVHE+ +G  +WIV+PK+V+Y F+T   VPKLGVMLVGWGGNNGSTLT GVIANREGISWATKD VQQANY+GSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDD+V  GWDIS+MNLADA
Sbjct:    1 MFIESFRVESPHVRYGAAEIESDYQYDTTELVHESHDGASRWIVRPKSVRYNFRTTTTVPKLGVMLVGWGGNNGSTLTAGVIANREGISWATKDKVQQANYYGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDLVFGGWDISNMNLADA 152          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.652e-65
Identity = 118/152 (77.63%), Postives = 131/152 (86.18%), Query Frame = 3
Query:  270 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            MFIE+F+VESP V+Y   EI S Y Y+TTELVHE+ +G  +W+V+PK+V Y FKT+  VPKLGVMLVGWGGNNGSTL  GVIANREGISWATKD VQQANYFGSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDD+V  GWDIS MNLADA
Sbjct:    1 MFIESFRVESPKVRYGAGEIESEYRYDTTELVHESHDGASKWVVRPKSVNYHFKTNTTVPKLGVMLVGWGGNNGSTLMAGVIANREGISWATKDKVQQANYFGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDLVFGGWDISSMNLADA 152          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.988e-40
Identity = 84/150 (56.00%), Postives = 110/150 (73.33%), Query Frame = 3
Query:  279 ENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            E+FKV SPNVKYTD  I S Y Y+TT++  +N NG  + IV+P   KY FKT+  VP++GVM+VG  GNNG+T+ GGVIANREG+ W TK  +Q  NYFGS+  +S IR+G   NG + Y P K+++PMV+P+DIV  GWDI++ NLADA
Sbjct:    7 ESFKVNSPNVKYTDEHIISDYTYQTTKV--QNVNG--ELIVEPVDQKYIFKTERKVPRMGVMIVGLCGNNGTTVVGGVIANREGLCWNTKQGLQTPNYFGSVVMSSTIRMGMDENGCDAYIPLKNLIPMVHPNDIVFGGWDINNANLADA 152          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.557e-39
Identity = 80/149 (53.69%), Postives = 108/149 (72.48%), Query Frame = 3
Query:  279 ENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            E FKVESP+V+Y  + I + Y Y+TT+ V+E +  T    VKP + K+ F T+  VPKLGVMLVGWGGNNG+T+T  V+ANR G+SW TK   + ANY+GSL Q+S + +G  +  E++ PF+ +LPMVNP+D+V  GWDIS +NLADA
Sbjct:    3 EMFKVESPHVRYLKDVIEADYSYDTTQ-VYEEKGVTK---VKPCSTKFTFHTERKVPKLGVMLVGWGGNNGTTVTAAVLANRLGLSWMTKTGKKVANYYGSLFQSSTVCLGRGSSGEVFVPFRDLLPMVNPNDLVFDGWDISSLNLADA 147          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.916e-39
Identity = 80/149 (53.69%), Postives = 108/149 (72.48%), Query Frame = 3
Query:  279 ENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            E FKVESP+V+Y  + I + Y+Y+TT+ V+E +  T    VKP + K+ F T+  VPKLGVMLVGWGGNNG+T+T  V+ANR G+SW TK   + ANY+GSL Q+S   +GS    +++ PF+ +LPMV+P+DIV  GWDIS +NLADA
Sbjct:    3 EKFKVESPHVRYLKDVIEADYNYDTTQ-VYEEKGVTK---VKPCSTKFTFHTERKVPKLGVMLVGWGGNNGTTVTAAVLANRLGLSWMTKTGKKVANYYGSLFQSSTACLGSGPAGDVFVPFRDLLPMVHPNDIVFDGWDISSLNLADA 147          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.104e-36
Identity = 76/148 (51.35%), Postives = 102/148 (68.92%), Query Frame = 3
Query:  285 FKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            F VESP+V Y+   I + Y+Y TT +  E   G  +  V P + ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  +SW T+   ++ANY+GSLTQA  + +G    G+E++ PF S+LPMV PDD+V  GWDIS +NLA+A
Sbjct:    7 FVVESPDVVYSPETIEAQYEYRTTSVSREG--GVLK--VHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLSWPTRTGRKEANYYGSLTQAGTVSLGLDAEGKEVFVPFSSLLPMVAPDDLVFDGWDISSLNLAEA 150          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.326e-35
Identity = 72/146 (49.32%), Postives = 102/146 (69.86%), Query Frame = 3
Query:  291 VESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            V+SP+V Y+   I + Y+Y TT +  E   G  +  V+P+  ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  ++W T+   ++ANY+GSLTQA  + +G   NG E++ PF ++LPMV P+D+V  GWDIS +NLA+A
Sbjct:    9 VDSPDVVYSPETIEARYEYRTTRVSREG--GVLR--VQPRATRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLTWPTRTGRKEANYYGSLTQAGTVNLGLDENGREVFVPFSALLPMVAPNDLVFDGWDISSLNLAEA 150          
The following BLAST results are available for this feature:
BLAST of FC920482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_MESCR2.542e-7486.36Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO1_SPIPO1.181e-7182.89Inositol-3-phosphate synthase OS=Spirodela polyrrh... [more]
INO1_MAIZE7.414e-6677.63Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO1_ORYSJ9.683e-6677.63Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_HORVU1.652e-6577.63Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_DICDI6.988e-4056.00Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1B_XENLA1.557e-3953.69Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1A_XENLA5.916e-3953.69Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1_BOVIN2.104e-3651.35Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1_MOUSE2.326e-3549.32Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionC32008H12EF RVDevelop1 Citrus clementina cDNA clone C32008H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920482 ID=FC920482; Name=FC920482; organism=Citrus clementina; type=EST; length=726bp
GATGCACAGATTACCAGGCTAGCTTCGAAAGTTAAAAGAGTGTTGAGTCG
AGTGGGAAGTGAGAATTGAGAAGGAGAGTCGAGTTCGGAGACAGCAAGAC
GAAACAGCTCTTCTTCCAATAAATCTCAAAGCATTTGTTTGGTTTTATTT
AAAGCAATTTTCTCAGCAAACTCTTCTTCTAATAAATTTTAAAGCATTTG
TTTGGTTTTTATTTAAAGCAATTTTCTCAGCGAAGTTTTCAATTTTTTCT
CTAAAATTTTCCTGGGAAAATGTTTATCGAAAATTTCAAGGTTGAGAGCC
CAAATGTGAAGTACACAGATAATGAGATTCACTCTGTGTACGATTATGAA
ACCACTGAGCTTGTTCATGAGAACAGAAATGGCACTTATCAGTGGATTGT
CAAGCCCAAAACTGTCAAATATGAGTTCAAAACCGATGTTCATGTCCCTA
AACTTGGGGTTATGCTTGTGGGTTGGGGTGGAAACAACGGCTCAACTCTC
ACGGGTGGTGTTATCGCGAATCGAGAGGGAATCTCCTGGGCCACAAAGGA
CACAGTGCAACAAGCCAATTATTTTGGTTCACTTACCCAAGCATCAGCAA
TTAGAGTTGGGTCTTACAATGGAGAGGAGATTTATGCTCCATTCAAGAGC
ATTCTCCCTATGGTGAACCCAGATGACATTGTGTTGGNAGGATGGGACAT
TAGTGACATGAACTTGGCTGATGCCA
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