FC920482

Overview
NameFC920482
Unique NameFC920482
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig952 contig Ccv1_Contig952:6..731. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.326e-35
Identity = 74/148 (50.00%), Postives = 101/148 (68.24%), Query Frame = 3
Query:  285 FKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            F VESP+V Y    I + Y+Y TT +  E   G  +  V P + ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  +SW T+   ++ANY+GSLTQA  + +G    G+E++ PF ++LPMV P+D+V  GWDIS +NLA+A
Sbjct:    7 FFVESPDVVYGPEAIEAQYEYRTTRVSREG--GVLK--VHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLSWPTRSGRKEANYYGSLTQAGTVSLGLDAEGQEVFVPFSAVLPMVAPNDLVFDGWDISSLNLAEA 150          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.038e-35
Identity = 74/148 (50.00%), Postives = 101/148 (68.24%), Query Frame = 3
Query:  285 FKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            F VESP+V Y    I + Y+Y TT +  E   G  +  V P + ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  +SW T+   ++ANY+GSLTQA  + +G    G+E++ PF ++LPMV P+D+V  GWDIS +NLA+A
Sbjct:    7 FFVESPDVVYGPEAIEAQYEYRTTRVSREG--GVLK--VHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLSWPTRSGRKEANYYGSLTQAGTVSLGLDAEGQEVFVPFSALLPMVAPNDLVFDGWDISSLNLAEA 150          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.840e-35
Identity = 73/147 (49.66%), Postives = 99/147 (67.35%), Query Frame = 3
Query:  288 KVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGS-YNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            +V SP V+  D  I + YDY+T+   H  R    Q  V P+T   + +T  HVPKLGVMLVGWGGNNGSTLT  + ANR  + W  +  VQ+AN++GS+TQAS + +GS  +G ++Y P K +LPMV PD+I++ GWDIS ++L DA
Sbjct:   10 EVISPKVQVDDEFITTDYDYQTS---HVKRTADGQLQVHPQTTSLKIRTGRHVPKLGVMLVGWGGNNGSTLTAALEANRRQLKWRKRTGVQEANWYGSITQASTVFIGSDEDGGDVYVPMKELLPMVEPDNIIVDGWDISGLHLGDA 153          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.667e-33
Identity = 70/146 (47.95%), Postives = 100/146 (68.49%), Query Frame = 3
Query:  291 VESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            V+SP+V +    I + Y+Y TT +  E   G  +  V+P   ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  ++W T+   ++ANY+GSLTQA  + +G   +G E++ PF ++LPMV P+D+V  GWDIS +NLA+A
Sbjct:    9 VDSPDVIFGPEAIEARYEYRTTRVSREG--GVLR--VRPTATRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLTWPTRTGRKEANYYGSLTQAGTVNLGLDGDGREVFVPFSALLPMVAPNDLVFDGWDISSLNLAEA 150          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.662e-31
Identity = 67/146 (45.89%), Postives = 100/146 (68.49%), Query Frame = 3
Query:  294 ESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG--SYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            +S N    D+ +++ + YE + +V ++ NG +  IV P    YEFK D+ VPK+G++LVG GGNNG+TL G  +AN+  IS+  K+ V + NY+GS+TQAS +++G     GE++Y PF SI+PMVNP+D+V+ GWDIS + L  A
Sbjct:    8 KSSNSVTKDDHLYTKFTYENS-VVEKDANGKF--IVTPTASDYEFKVDLKVPKVGLLLVGIGGNNGTTLLGATLANKHNISFENKEGVVKPNYYGSVTQASTVKIGVDKETGEDVYVPFNSIVPMVNPNDLVVDGWDISGLPLDQA 150          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 2.943e-30
Identity = 68/152 (44.74%), Postives = 99/152 (65.13%), Query Frame = 3
Query:  276 IENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVP-KLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            I + KV +    Y DNE+ + Y YE   +V +  +G +   V P    Y FK D+  P KLG+ML+G GGNNGSTL   V+AN+  + + TK+ V+Q NYFGS+TQ S +++G    G ++YAPF S+LPMV+P+D V+ GWDI++ +L +A
Sbjct:    9 ITSVKVVTDKCTYKDNELLTKYSYENA-VVTKTASGRFD--VTPTVQDYVFKLDLKKPEKLGIMLIGLGGNNGSTLVASVLANKHNVEFQTKEGVKQPNYFGSMTQCSTLKLGIDAEGNDVYAPFNSLLPMVSPNDFVVSGWDINNADLYEA 157          
BLAST of FC920482 vs. ExPASy Swiss-Prot
Match: INO1_CANGA (Inositol-3-phosphate synthase OS=Candida glabrata GN=INO1 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.014e-28
Identity = 65/144 (45.14%), Postives = 96/144 (66.67%), Query Frame = 3
Query:  306 VKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVP-KLGVMLVGWGGNNGSTLTGGVIANREGISWATKDT--VQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVLXGWDISDMNLADA 725
            V Y +NE+ + Y Y T  +VH N + T Q+ V P    Y+FK D++ P +LGVMLVG GGNNGST+   V+AN+  + + T+D   + + NY+GSLTQ+S I++G    G+++Y PF S++PMVNP+D V+ GWDI+   +  A
Sbjct:   18 VSYKENELLTNYTYHTN-VVHTNSDKT-QFEVTPLDKNYQFKVDLNKPERLGVMLVGLGGNNGSTMMAAVLANKHNVCFRTRDKEGLTEPNYYGSLTQSSTIKLGVDSKGKDVYVPFNSLVPMVNPNDFVVSGWDINGATMDQA 159          
The following BLAST results are available for this feature:
BLAST of FC920482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_HUMAN2.326e-3550.00Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_MACFA3.038e-3550.00Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]
INO1_DROME8.840e-3549.66Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1_RAT1.667e-3347.95Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1_CANAL2.662e-3145.89Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_YEAST2.943e-3044.74Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]
INO1_CANGA8.014e-2845.14Inositol-3-phosphate synthase OS=Candida glabrata ... [more]

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Properties
Property NameValue
Genbank descriptionC32008H12EF RVDevelop1 Citrus clementina cDNA clone C32008H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920482 ID=FC920482; Name=FC920482; organism=Citrus clementina; type=EST; length=726bp
GATGCACAGATTACCAGGCTAGCTTCGAAAGTTAAAAGAGTGTTGAGTCG
AGTGGGAAGTGAGAATTGAGAAGGAGAGTCGAGTTCGGAGACAGCAAGAC
GAAACAGCTCTTCTTCCAATAAATCTCAAAGCATTTGTTTGGTTTTATTT
AAAGCAATTTTCTCAGCAAACTCTTCTTCTAATAAATTTTAAAGCATTTG
TTTGGTTTTTATTTAAAGCAATTTTCTCAGCGAAGTTTTCAATTTTTTCT
CTAAAATTTTCCTGGGAAAATGTTTATCGAAAATTTCAAGGTTGAGAGCC
CAAATGTGAAGTACACAGATAATGAGATTCACTCTGTGTACGATTATGAA
ACCACTGAGCTTGTTCATGAGAACAGAAATGGCACTTATCAGTGGATTGT
CAAGCCCAAAACTGTCAAATATGAGTTCAAAACCGATGTTCATGTCCCTA
AACTTGGGGTTATGCTTGTGGGTTGGGGTGGAAACAACGGCTCAACTCTC
ACGGGTGGTGTTATCGCGAATCGAGAGGGAATCTCCTGGGCCACAAAGGA
CACAGTGCAACAAGCCAATTATTTTGGTTCACTTACCCAAGCATCAGCAA
TTAGAGTTGGGTCTTACAATGGAGAGGAGATTTATGCTCCATTCAAGAGC
ATTCTCCCTATGGTGAACCCAGATGACATTGTGTTGGNAGGATGGGACAT
TAGTGACATGAACTTGGCTGATGCCA
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