FC920488
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.475e-64 Identity = 114/202 (56.44%), Postives = 146/202 (72.28%), Query Frame = 3 Query: 93 CFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG-GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 C +VA + ATA A S ATFYGGSDASGTMGGACGYGNLYS GYG NTAALS+ALFN+G +CG C+++ C + +WC G ++ ITATN CPP++++PS++GGWCNPPR HFD+A P + ++ YR GIVPV+++RV C ++GG+RFTING YF LVL+TNV G G I V +KG T W++MSRN Sbjct: 10 CVAAVAACIAATAAAL-----------SGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGT-SVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRN 199
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 4.640e-62 Identity = 108/181 (59.67%), Postives = 134/181 (74.03%), Query Frame = 3 Query: 156 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDP-QWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 A W SA ATFYGGSDASGTMGG+CGYGN+YS GYG NT ALS+AL+ +G SCGAC+ + C +WC G ++ +TATN+CPPN+++ D GGWCNPPR HFD++ P + +A Y +GIVPV Y R PCR+ GGIRF I G Y+ LVLVTNVAG+G + VKG+ T+WLSMSRN Sbjct: 23 AAQQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGT-SVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRN 202
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 2.155e-59 Identity = 102/176 (57.95%), Postives = 130/176 (73.86%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 W ATFYG + T GACGYG+L+ QGYG+ TAALSTALFNNG CGAC+E+ C PQWC PG+ I ITATNFCPP+F +P+DN WCNPP+ HFDL+ PMFLK+A+Y+AG+VPV +RRVPC K GG++F I G +F ++L NV GAG + + +KG TQW++M +N Sbjct: 90 WGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGS--IKITATNFCPPDFTKPNDN--WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKN 261
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 228.409 bits (581), Expect = 2.815e-59 Identity = 103/176 (58.52%), Postives = 130/176 (73.86%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 W A ATFYG T GACGYGNL+ QGYG+ TAALSTALFN+G +CGAC+E+ C DPQWC PG+ + ITATNFCP N+++ +D WCNPP+ HFDL++ MFLK+A+Y+AG+VPV YRR+PC K GG++F G YF +VL+ NV GAGDI V VKG T W++M +N Sbjct: 52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGS--VKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKN 223
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.272e-59 Identity = 105/182 (57.69%), Postives = 129/182 (70.88%), Query Frame = 3 Query: 156 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 A W ATFYGG+D SGTMGGACGYGNLY QGYG+N AALST LFN+G SCG C+ + C P WC G AI +T TN+CPPN+ P GGWCN RPHFD++ P + + Y AGI+P+ Y++V C + GG+RFTINGF YF LVLVTN+AG+G I +SVKG+ T W+ M+RN Sbjct: 19 ARSDWLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGK-AITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRN 197
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 8.191e-59 Identity = 106/178 (59.55%), Postives = 127/178 (71.35%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 W ATFYGG+D SGTMGGACGYGNLY QGYG+N AALST LFNNG SCG C+ + C D P C G AI +T TNFCPPN+ P GGWCN RPHFD++ P + + Y AGIVP+ Y++V C + GG+RFTI G YF LVLVTN+AG+G I +SVKG++T W+ MSRN Sbjct: 23 WLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGT-AITVTGTNFCPPNYDLPY--GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRN 197
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 2.383e-58 Identity = 102/176 (57.95%), Postives = 129/176 (73.30%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 W A ATFYG T GACGYGNL+ QGYG+ TAALSTALFN+G +CGAC+E+ C DPQWC PG+ + ITATNFCP N+++ +D WCNPP+ HFDL++ MFLK+A+Y+AG+VPV YRR+PC K GG++F G YF +VL+ NV GAGDI V VK T W++M +N Sbjct: 58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGS--VKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKN 229
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.309e-58 Identity = 110/201 (54.73%), Postives = 136/201 (67.66%), Query Frame = 3 Query: 102 SVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGG--WCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-GANTQWLSMSRN 695 +V +SL A A + F W AHATFYG AS TMGGACGYGNLY+ GYG +TAALST LF +G CG C++++C G C G+PAI +TATN CPPN+A+ D GG WCNPPR HFDL+ P F+++A +RAGIVPV YRRVPC + GG+RF + G Y+ L V NVAGAGD+ + VK G W+ MS N Sbjct: 16 AVIISL-AGAATTVDAKFRAMQWTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHN 214
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 5.309e-58 Identity = 99/176 (56.25%), Postives = 128/176 (72.73%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 W A ATFYG T GACGYG+L+ QGYG+ TAALSTALFN G +CGAC+++ C DPQWC PG+ + ITATNFCPP++++ G WCNPP+ HFDL++PMFLK+AQY+AG+VPV YRR+ C + GG++F G YF ++L NV GAGDI + VKG T W++M +N Sbjct: 48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGS--VKITATNFCPPDYSKTE--GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKN 219
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 9.056e-58 Identity = 100/176 (56.82%), Postives = 127/176 (72.16%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 W A ATFYG T GACGYG+L+ QGYG+ TAALSTALFN G +CGAC+++ C DPQWC PG I ITATNFCPP++++ G WCNPP+ HFDL++PMFLK+AQY+AG+VPV YRR+ C + GG++F G YF ++L NV GAGDI + VKG T W++M +N Sbjct: 55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGT--IKITATNFCPPDYSKTE--GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKN 226 The following BLAST results are available for this feature:
BLAST of FC920488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920488 ID=FC920488; Name=FC920488; organism=Citrus clementina; type=EST; length=695bpback to top |