FC920488
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXPB9_ORYSJ (Expansin-B9 OS=Oryza sativa subsp. japonica GN=EXPB9 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12 Identity = 54/180 (30.00%), Postives = 84/180 (46.67%), Query Frame = 3 Query: 165 PWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLA-------QYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRVSVKGA 665 PW A AT+YG SG+ GGACG N+ Y + + +F +G CG+C+E+KC P C+ + IT N+ P + HFD + F +A +AGI+ + +RRV C+ GG + T + + N VLV VA GD++++ ++ A Sbjct: 42 PWLPARATWYGQPYGSGSTDNGGACGIKNVNLPPYNGMISCGNVPIFKDGRGCGSCYEVKC-EQPAACSKQPVTVFITDMNYEPIS--------------AYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPGGQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEA 206
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXPB5_ARATH (Expansin-B5 OS=Arabidopsis thaliana GN=EXPB5 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12 Identity = 63/217 (29.03%), Postives = 89/217 (41.01%), Query Frame = 3 Query: 72 MALFRMLCF-FSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG---GIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSM 686 MA + CF F V L+ F + K W +A T+YG + GT GGACGYG+ ++ Y +A +LF +G CGAC+ LKC D C ++I SD C HFDL+ F LA+ G + VSY+R C+ I Y+ V G G+ + V+ A Q++ M Sbjct: 1 MASSSLKCFSFIVVLTTFFAISLKPCYCHNKTHWNTAGITWYGDREGPGTTGGACGYGDAVAKHPYRCMVSAGGPSLFKDGKGCGACYRLKC--DHPLCTKKPIKVMI-------------SDECPGCTKESVHFDLSGKAFGALAKRGKGDQLRNLGELKVSYKRACCKHPKTMIAIHVDAGANPYYMSFAVKFANGDGNFACIEVQPAGGQYMKM 202
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXPB1_ORYSJ (Expansin-B1 OS=Oryza sativa subsp. japonica GN=EXPB1a PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.977e-12 Identity = 57/194 (29.38%), Postives = 90/194 (46.39%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGY-GVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRVSVK-GANTQWLSMSRN 695 G W A AT+YG +G GGACGY ++ + G+N+ + +F +G CG+CFE+KC P+ C+ I +T N P HFDL+ F +A+ +AGI+ +RRV C+ + T + + N +LV VAG GD+V V +K + +W ++ + Sbjct: 38 GDKWLEAKATWYGAPKGAGPKDNGGACGYKDVDKAPFLGMNSCG-NDPIFKDGKGCGSCFEIKC-SKPEACSDKPALIHVTDMNDEP--------------IAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKCKYPADTKITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKES 215
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: MPAL1_LOLPR (Pollen allergen Lol p 1 OS=Lolium perenne PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.582e-12 Identity = 58/194 (29.90%), Postives = 90/194 (46.39%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRP-HFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRVSVK-GANTQWLSMSRN 695 G W A +T+YG +G GGACGY N+ + T +T +F +G CG+CFE+KC P+ C+ A+ +T T+ DN P P HFDL+ F +A+ AG + + +RRV C+ + T + + N +LV V G GD+V V +K +W+ + + Sbjct: 38 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKNVDKAPFNGMTGCGNTPIFKDGRGCGSCFEIKC-TKPESCS--GEAVTVTITD----------DNE---EPIAPYHFDLSGHAFGSMAKKGEEQNVRSAGELELQFRRVKCKYPDDTKPTFHVEKASNPNYLAILVKYVDGDGDVVAVDIKEKGKDKWIELKES 215
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXPB8_ORYSJ (Expansin-B8 OS=Oryza sativa subsp. japonica GN=EXPB8 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.582e-12 Identity = 54/188 (28.72%), Postives = 84/188 (44.68%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG---GIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANT---QWLSM 686 W +A AT+YG + +G GGACG+ + + T+ + L+ G CG+C+ ++C +P C+ + IT N+ P + + HFDL+ F +LA+ RAGI+ V + RVPC G G + VLV G GD+ +V +K A +W M Sbjct: 48 WGNAKATWYGQPNGAGAADNGGACGFKKVNQYPFMGMTSCGNQPLYKGGKGCGSCYRVRCNRNPA-CSGNAQTVAITDMNYFPLS--------------QYHFDLSGIAFGRLAKPGRADDLRRAGIIDVQFARVPCEFPGLKVGFHVEEGSSPVYLAVLVEYENGDGDVAQVDLKEAGAGGGRWTPM 220
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXB10_ORYSJ (Expansin-B10 OS=Oryza sativa subsp. japonica GN=EXPB10 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 57/181 (31.49%), Postives = 85/181 (46.96%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGY-GVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRVSVK 659 G W A T+YG +G GGACGY ++ + G+N+ + +F +G CG+CFE+KC P+ C+ I IT N P HFDL+ F +A+ +AGI+ + +RRV C+ G + T + + N VLV V G GD+V+V +K Sbjct: 38 GKQWLEARGTWYGKPKGAGPDDNGGACGYKDIDKAPFLGMNSCG-NDPIFKDGKGCGSCFEVKC-SKPEACSDKPVIIHITDMNTEP--------------IAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELK 202
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: MPAC1_CYNDA (Major pollen allergen Cyn d 1 OS=Cynodon dactylon GN=CYND1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 54/181 (29.83%), Postives = 83/181 (45.86%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSD---ASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTIN----GFRYFNLVLVTNVAGAGDIVRVSVK 659 G W A ATFYG + A GGACGY ++ + TA + +F +GL C AC+E+KC +P C+ + IT N+ + HFDL+ F +A+ +AG + + +RRV C+ G + T + ++ +LV AG G+IV V +K Sbjct: 15 GSKWLEARATFYGSNPRGAAPDDHGGACGYKDVDKPPFDGMTACGNEPIFKDGLGCRACYEIKC-KEPVECSGEPVLVKITDKNY--------------EHIAAYHFDLSGKAFGAMAKKGQEDKLRKAGELTLQFRRVKCKYPSGTKITFHIEKGSNDHYLALLVKYAAGDGNIVAVDIK 180
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: MPAP1_PHLPR (Pollen allergen Phl p 1 OS=Phleum pratense GN=PHLPI PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12 Identity = 58/195 (29.74%), Postives = 90/195 (46.15%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAIL-ITATNFCPPNFAQPSDNGGWCNPPRP-HFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRVSVK-GANTQWLSMSRN 695 G W A +T+YG +G GGACGY ++ + T +T +F +G CG+CFE+KC P+ C+ G P ++ IT N P P HFDL+ F +A+ AG + + +RRV C+ G + T + + N +LV V G GD+V V +K +W+ + + Sbjct: 38 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKC-TKPEACS-GEPVVVHITDDNE---------------EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKES 215
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: MPAP1_PHAAQ (Major pollen allergen Pha a 1 OS=Phalaris aquatica PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12 Identity = 57/194 (29.38%), Postives = 87/194 (44.85%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRP-HFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRVSVK-GANTQWLSMSRN 695 G W A +T+YG +G GGACGY ++ + T +T +F +G CG+CFELKC P+ C+ + IT N P P HFDL+ F +A+ AG + + +RRV C+ G + T + + N +LV V G GD+V V +K +W+ + + Sbjct: 44 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKAPFNGMTGCGNTPIFKDGRGCGSCFELKC-SKPESCSGEPITVHITDDNE---------------EPIAPYHFDLSGHAFGSMAKKGEEENVRGAGELELQFRRVKCKYPDGTKPTFHVEKGSNPNYLALLVKYVDGDGDVVAVDIKEKGKDKWIELKES 221
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: MPAH1_HOLLA (Major pollen allergen Hol l 1 OS=Holcus lanatus PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.674e-11 Identity = 55/194 (28.35%), Postives = 87/194 (44.85%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRP-HFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRVSVK-GANTQWLSMSRN 695 G W A +T+YG +G GGACGY ++ + T +T +F +G CG+CFE+KC P+ C+ + IT N P P HFDL+ F +A+ AG + + +RRV C+ G + T + + N +LV + G GD+V V +K +W+ + + Sbjct: 40 GDEWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKDGRGCGSCFEIKC-TKPESCSGEPVTVHITDDNE---------------EPIAPYHFDLSGHAFGSMAKKGEEQKLRSAGELELKFRRVKCKYPDGTKPTFHVEKGSNPNYLALLVKYIDGDGDVVAVDIKEKGKDKWIELKES 217 The following BLAST results are available for this feature:
BLAST of FC920488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920488 ID=FC920488; Name=FC920488; organism=Citrus clementina; type=EST; length=695bpback to top |