FC920490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: CDC48_CAPAN (Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+D+GG Q +IRE VELPL H +L+K IG+ PP+G+LLYGPPG+GK Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+D+GG Q +IRE VELPL H +L+K IG+ PP+G+LLYGPPG+GK Sbjct: 203 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 254
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+D+GG Q +IRE VELPL H +L+K IG+ PP+G+LLYGPPG+GK Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+D+GG Q +I+E VELPL H +L+K IG+ PPRG+LL+GPPGTGK Sbjct: 205 EVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGK 256
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: AFG2_SCHPO (ATPase family gene 2 protein OS=Schizosaccharomyces pombe GN=afg2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 30/55 (54.55%), Postives = 43/55 (78.18%), Query Frame = 1 Query: 535 EKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 E P+V ++DIGG + KQ+++E+VE PLTH E + ++G+ PP+GVLLYGPPG K Sbjct: 541 ESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSK 595
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: SPAT5_HUMAN (Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11 Identity = 34/57 (59.65%), Postives = 39/57 (68.42%), Query Frame = 1 Query: 529 QSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 Q + VTY+ IGG Q + IRE +ELPL EL+K GI PRGVLLYGPPGTGK Sbjct: 344 QDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGK 400
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: SPAT5_MOUSE (Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 1 Query: 529 QSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 Q + VTY+ IGG + Q + IRE +ELPL EL+K GI PRG+LLYGPPGTGK Sbjct: 344 QDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGK 400 The following BLAST results are available for this feature:
BLAST of FC920490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920490 ID=FC920490; Name=FC920490; organism=Citrus clementina; type=EST; length=702bpback to top |