FC920648
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920648 vs. ExPASy Swiss-Prot
Match: P4HA2_HUMAN (Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12 Identity = 45/149 (30.20%), Postives = 76/149 (51.01%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRCEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPN 585 +I P K + P Y ++D E + + +AK +L R+ V D +G ++ R S +++ + D ++A + ++ T L + E +QV G +YEPH+D+ D + G+R+AT L Y+SDV GG TVFP+ Sbjct: 323 LIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFLNYMSDVEAGGATVFPD 471
BLAST of FC920648 vs. ExPASy Swiss-Prot
Match: P4HA3_RAT (Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.260e-11 Identity = 47/149 (31.54%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLS-DVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKEN--GEDIQVLRCEHGQKYEPHYDYF---SDKVNIVRGGHRLATVLMYLSDVAKGGETVF 579 ++ P++ + I +P +Y F++D E + LA+ L+RS VA SGE +L + R S ++ D ++ ++ +IA T L + E +QV+ G YEPH+D+ S + ++ G+R AT+++YLS V GG T F Sbjct: 333 LLQPARKEVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQRSVVA---SGEKQLQVEYRISKSAWLKDTVDPVLVTLDRRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYKMKSGNRAATLMIYLSSVEAGGATAF 478
BLAST of FC920648 vs. ExPASy Swiss-Prot
Match: P4HA3_MOUSE (Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11 Identity = 46/149 (30.87%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLS-DVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKEN--GEDIQVLRCEHGQKYEPHYDYF---SDKVNIVRGGHRLATVLMYLSDVAKGGETVF 579 ++ P++ + + +P +Y F++D E + LA+ L+RS VA SGE +L + R S ++ D ++ ++ +IA T L + E +QV+ G YEPH+D+ S + ++ G+R+AT ++YLS V GG T F Sbjct: 331 LLQPARKEVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSVVA---SGEKQLQVEYRISKSAWLKDTVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAF 476
BLAST of FC920648 vs. ExPASy Swiss-Prot
Match: P4HA3_BOVIN (Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11 Identity = 47/149 (31.54%), Postives = 78/149 (52.35%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLS-DVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKEN--GEDIQVLRCEHGQKYEPHYDYF---SDKVNIVRGGHRLATVLMYLSDVAKGGETVF 579 ++ P + + I +P +Y F++D E + LA+ L+RS VA SGE +L + R S ++ D ++ ++ +IA T L + E +QV+ G YEPH+D+ S + + G+R+AT ++YLS V GG T F Sbjct: 333 LLQPVRKEVIHLEPYVVLYHDFVSDAEAQTIRGLAEPWLQRSVVA---SGEKQLPVEYRISKSAWLKDTVDPVLVTLDHRIAALTGLDVQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMNSGNRVATFMIYLSSVEAGGATAF 478 The following BLAST results are available for this feature:
BLAST of FC920648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920648 ID=FC920648; Name=FC920648; organism=Citrus clementina; type=EST; length=687bpback to top |