FC920648
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920648 vs. ExPASy Swiss-Prot
Match: P4HA1_RAT (Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.136e-15 Identity = 48/148 (32.43%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRCEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFP 582 I+ P+K + KPR + ++D E + + +LAK +L R+ V D +G+ + R S ++ +D +++ I +I T L E++QV G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFP 469
BLAST of FC920648 vs. ExPASy Swiss-Prot
Match: P4HA1_MOUSE (Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.217e-14 Identity = 46/148 (31.08%), Postives = 81/148 (54.73%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRCEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFP 582 I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G + R S ++ +D +++ I +I T L E++QV G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFP 469
BLAST of FC920648 vs. ExPASy Swiss-Prot
Match: P4HA1_PONAB (Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.590e-14 Identity = 45/148 (30.41%), Postives = 82/148 (55.41%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRCEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFP 582 I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G+ + R S ++ ++ +++ I +I T L E++QV G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP 469
BLAST of FC920648 vs. ExPASy Swiss-Prot
Match: P4HA1_HUMAN (Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.590e-14 Identity = 45/148 (30.41%), Postives = 82/148 (55.41%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRCEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFP 582 I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G+ + R S ++ ++ +++ I +I T L E++QV G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP 469
BLAST of FC920648 vs. ExPASy Swiss-Prot
Match: P4HA1_BOVIN (Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.712e-14 Identity = 45/148 (30.41%), Postives = 81/148 (54.73%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRCEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFP 582 I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G+ + R S ++ ++ +++ I +I T L E++QV G +YEPH+D+ D + G+R+AT L Y+SDV GG TVFP Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVLAGGATVFP 469
BLAST of FC920648 vs. ExPASy Swiss-Prot
Match: P4HA2_CHICK (Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.296e-13 Identity = 46/147 (31.29%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRCEHGQKYEPHYDYFSDKVN--IVRGGHRLATVLMYLSDVAKGGETVFPN 585 +I P K + P Y ++D E + + LAK +L R+ V D +G ++ R S +++ + D ++A + ++ T L + E +QV G +YEPH+D+ + + G+RLAT L Y+SDV GG TVFP+ Sbjct: 324 LIAPFKEEDEWDSPHIVRYYDVMSDEEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTLKSEGNRLATFLNYMSDVEAGGATVFPD 470
BLAST of FC920648 vs. ExPASy Swiss-Prot
Match: P4HA2_CAEEL (Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans GN=phy-2 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.296e-13 Identity = 43/144 (29.86%), Postives = 77/144 (53.47%), Query Frame = 1 Query: 160 PSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRCEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVF 579 P KV+ + + P A +++ + D E + + LA +LKR+ V ++ +GE + + R S ++ D +I + +I +T L + E++QV G Y+PH+D+ + + G+R+ATVL Y+S +GG TVF Sbjct: 315 PIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVF 458
BLAST of FC920648 vs. ExPASy Swiss-Prot
Match: P4HA1_CHICK (Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.296e-13 Identity = 47/148 (31.76%), Postives = 76/148 (51.35%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRCEHGQKYEPHYDY----FSDKVNIVRGGHRLATVLMYLSDVAKGGETVFP 582 I+ P K + KPR + ++D E + + LAK +L R+ V D +G+ + R S ++ + +++ I +I T L E++QV G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP Sbjct: 304 ILGPVKQEDEWDKPRIVRFLDIISDEEIETVKELAKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYESPVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP 451
BLAST of FC920648 vs. ExPASy Swiss-Prot
Match: P4HA2_MOUSE (Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 45/149 (30.20%), Postives = 76/149 (51.01%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRCEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPN 585 +I P K + P Y ++D E + + +AK +L R+ V D +G ++ R S +++ + D ++A + ++ T L + E +QV G +YEPH+D+ D + G+R+AT L Y+SDV GG TVFP+ Sbjct: 325 LIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFLNYMSDVEAGGATVFPD 473
BLAST of FC920648 vs. ExPASy Swiss-Prot
Match: P4HA1_CAEEL (Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans GN=dpy-18 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 47/162 (29.01%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 160 PSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRCEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDL 633 P KV+ + P A +++ ++D E + LAK +L R+ V D+++G+ + R S ++ + + ++ + +I T L E E++Q+ G Y+PH+D+ S + G+R+ATVL Y+S + GG TVF A+ P ND L Sbjct: 318 PIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFESLGTGNRIATVLFYMSQPSHGGGTVFTEAKS---TILPTKNDAL 476 The following BLAST results are available for this feature:
BLAST of FC920648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920648 ID=FC920648; Name=FC920648; organism=Citrus clementina; type=EST; length=687bpback to top |