FC920665

Overview
NameFC920665
Unique NameFC920665
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14114 contig Ccv1_Contig14114:11..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920665 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 3.864e-29
Identity = 68/140 (48.57%), Postives = 91/140 (65.00%), Query Frame = 2
Query:  254 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYEQGARFAKWRTVVSI 670
            EL + A+++ + G+GILA DES  T G RL  I +ENTE NR+ +R +L +    + Q I G ILF ETLYQ  + GK   ++L E+ IV GIK+D+G  PLAG+N E+  QGLDGL+ R A Y + G  F KWR V+ I
Sbjct:   15 ELSEIAQSIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFREILFSVDSSINQSIGGVILFHETLYQKDSQGKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRI 154          
BLAST of FC920665 vs. ExPASy Swiss-Prot
Match: ALDOB_HUMAN (Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.864e-29
Identity = 68/140 (48.57%), Postives = 91/140 (65.00%), Query Frame = 2
Query:  254 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYEQGARFAKWRTVVSI 670
            EL + A+++ + G+GILA DES  T G RL  I +ENTE NR+ +R +L +    + Q I G ILF ETLYQ  + GK   ++L E+ IV GIK+D+G  PLAG+N E+  QGLDGL+ R A Y + G  F KWR V+ I
Sbjct:   15 ELSEIAQSIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFREILFSVDSSINQSIGGVILFHETLYQKDSQGKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRI 154          
BLAST of FC920665 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28
Identity = 69/140 (49.29%), Postives = 89/140 (63.57%), Query Frame = 2
Query:  254 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYEQGARFAKWRTVVSI 670
            EL + A+ + + G+GILA DES  T G RL  I +ENTE NR+ +R LL +    + Q I G ILF ETLYQ  + G    +VL E+ IV GIK+D+G  PLAG+N E+  QGLDGL+ R A Y + G  F KWR V+ I
Sbjct:   15 ELSEIAQRIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFRELLFSVDNSISQSIGGVILFHETLYQKDSQGNLFRNVLKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRI 154          
BLAST of FC920665 vs. ExPASy Swiss-Prot
Match: ALDOB_DANRE (Fructose-bisphosphate aldolase B OS=Danio rerio GN=aldob PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28
Identity = 67/140 (47.86%), Postives = 88/140 (62.86%), Query Frame = 2
Query:  254 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAP-GLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYEQGARFAKWRTVVSI 670
            EL   A+ + +PG+GILA DES  T  KR   I +ENTE NR+++R LL +    + + I G ILF ETLYQ +  G     V+ ++ IV GIKVDKG   LAG++ E+  QGLDGL+ R A Y + G  FAKWR V+ I
Sbjct:   15 ELATIAERIVAPGKGILAADESTGTMAKRFQKINVENTEENRRSFRDLLFSVDDSISESIGGVILFHETLYQKSDKGVLFPKVIKDKGIVVGIKVDKGTAGLAGTDGETTTQGLDGLSERCAQYKKDGCDFAKWRCVLKI 154          
BLAST of FC920665 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28
Identity = 65/135 (48.15%), Postives = 87/135 (64.44%), Query Frame = 2
Query:  269 AKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYEQGARFAKWRTVVSI 670
            A+ + + G+GILA DES  T G RL  I +ENTE NR+A+R +L ++   + + I G ILF ETLYQ  + GK    ++ E+ +V GIK+D G  PLAG+N E+  QGLD LA R A Y + GA F KWR V+ I
Sbjct:   20 AQRIVASGKGILAADESVGTMGNRLQRINVENTEENRRAFREILFSSDASISKSIGGVILFHETLYQKDSSGKPFPAIIKEKGMVVGIKLDAGTAPLAGTNGETTIQGLDKLAERCAQYKKDGADFGKWRAVLKI 154          
BLAST of FC920665 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19
Identity = 52/138 (37.68%), Postives = 80/138 (57.97%), Query Frame = 2
Query:  266 TAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYEQGARFAKWRTVVSIPNG 679
            TAK +   G+GILA DE+  T G+R   +G+ NTE NR+ +R +L +  G+ +YI G IL +ET  Q++  G  + ++L ++ I  GIK+DKGL+       E    GL+ L  R  +   + A FAKWR++    +G
Sbjct:   13 TAKKILENGKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQTSGSGVPLTELLKKKGIEIGIKLDKGLIDY--KEKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDG 148          
The following BLAST results are available for this feature:
BLAST of FC920665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALDOB_PONAB3.864e-2948.57Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALDOB_HUMAN3.864e-2948.57Fructose-bisphosphate aldolase B OS=Homo sapiens G... [more]
ALDOB_MOUSE1.124e-2849.29Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]
ALDOB_DANRE1.124e-2847.86Fructose-bisphosphate aldolase B OS=Danio rerio GN... [more]
ALDOB_CHICK4.272e-2848.15Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALF_ENCCU6.183e-1937.68Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionC32011D12EF RVDevelop1 Citrus clementina cDNA clone C32011D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920665 ID=FC920665; Name=FC920665; organism=Citrus clementina; type=EST; length=687bp
AGGCAGAAGAAAGACAGTGAAGATAAGATTATAAGTGCTATAAGCTAAGG
CCTCTCGAGCTCAGAACCCACAGCAAGAAGAAGCAAAGAGGAAAATGGCC
TCAGCCTCGGCATCTTTACTCAAGTCATCATCCCCCGTTCTTGACAAGTC
TGAGTGGGTTAAGGGCCAGGCCATCCGCCAGTCTACTGTCTCAGTCCGCA
GCCTCCCCAGTGGCCCCTCTTCCCTCACCATCCGTGCTGGTTCCTATGCC
GATGAGCTTGTCAAGACCGCGAAAACTGTTGCATCACCAGGACGTGGAAT
TTTGGCCATGGATGAGTCAAATGCAACTTGTGGAAAACGCCTTGCCTCAA
TTGGGTTAGAGAACACTGAGGCTAACCGCCAGGCATACCGTACCCTCCTT
GTTACAGCCCCTGGTCTTGGACAGTACATCTCTGGTGCCATCCTTTTTGA
GGAGACTCTCTACCAATCCACCACCGATGGCAAGAAGATGGTCGATGTTC
TTGTTGAGCAAAACATTGTCCCCGGTATCAAAGTCGACAAGGGTTTGGTG
CCCCTTGCTGGTTCCAATGATGAGTCATGGTGCCAGGGTCTTGATGGCCT
GGCTTCTCGCACTGCTGCCTACTACGAACAGGGAGCTCGTTTCGCCAAAT
GGCGTACTGTTGTGAGCATTCCCAATGGCCCATCTGC
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