FC920670

Overview
NameFC920670
Unique NameFC920670
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15347 contig Ccv1_Contig15347:47..762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920670 vs. ExPASy Swiss-Prot
Match: ADK_YEAST (Adenosine kinase OS=Saccharomyces cerevisiae GN=ADO1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33
Identity = 80/197 (40.61%), Postives = 112/197 (56.85%), Query Frame = 2
Query:   92 LLGMGNPLLDISAVVDEEFLKKYDIKSNNAILAE----DKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKSS**TFLLHLSA 670
            L+ +GNPLLD  A V  E+L KY +K N+AIL +    D  + ++DEL      + +AGGA QN+ + A ++L   G   Y G +GKDKF E +   +  AGV   Y       TG CA  + G  RSLV +L AAN +  +HL +   W +VE AK +YI GF LTVSP++I  + +HA   +K     F+L+ SA
Sbjct:    5 LVVLGNPLLDFQADVTAEYLAKYSLKENDAILVDAKSGDAKMAIFDELLQMPETKLVAGGAAQNTARGAAYVLGA-GQVVYFGSVGKDKFSERLLNENEKAGVKSMYQVQNDIGTGKCAALITGHNRSLVTDLGAANFFTPDHLDKH--WDLVEAAKLFYIGGFHLTVSPDAIVKLGQHAKENSK----PFVLNFSA 194          
BLAST of FC920670 vs. ExPASy Swiss-Prot
Match: ADK_TOXGO (Adenosine kinase OS=Toxoplasma gondii GN=AK PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18
Identity = 59/194 (30.41%), Postives = 99/194 (51.03%), Query Frame = 2
Query:   92 LLGMGNPLLDISAVVDEEFLKKYDIKSNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIW-SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKSS**TFLLHLSA 670
            +  +GNP+LD+ A V   FL ++ +K  +A LA  + + +Y  L  + N   + GG+  NS++V Q +L+ PG+  Y+G IG D  G+ +K+     G+  ++       TG CAV +   ER+L  +L A   +     + PE W +    A  +Y   + LT +P++   VA +A     +    F L+LSA
Sbjct:   15 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALNSVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSF-----RLPEDWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNA---IFTLNLSA 199          
The following BLAST results are available for this feature:
BLAST of FC920670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ADK_YEAST3.626e-3340.61Adenosine kinase OS=Saccharomyces cerevisiae GN=AD... [more]
ADK_TOXGO5.621e-1830.41Adenosine kinase OS=Toxoplasma gondii GN=AK PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionC32011E06EF RVDevelop1 Citrus clementina cDNA clone C32011E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920670 ID=FC920670; Name=FC920670; organism=Citrus clementina; type=EST; length=715bp
GAGTTGCACCAAGTGAGATCTTCCCATTGAACTGAGCTTGTTAGTTGATC
TCTTTGTAAAATCTTTTGCATCAATGGCGTACGAAGGGATCCTGTTGGGC
ATGGGAAACCCACTTCTTGACATTTCAGCGGTTGTCGACGAAGAGTTCTT
GAAAAAATATGACATCAAGTCGAACAATGCTATTCTTGCTGAAGACAAGC
ACTTGCCCATGTATGATGAATTAGCTTCCAAAGAAAATGTGGAGTATATT
GCTGGGGGTGCTACACAAAATTCAATCAAAGTTGCCCAGTGGATGCTCCA
AATTCCTGGTGCTACTAGTTACATCGGCTGCATTGGAAAGGATAAGTTTG
GAGAGGAGATGAAGAAAAACTCAACAGCTGCTGGTGTCAATGTAAAATAC
TACGAGGATGAATCTGCACCAACAGGGACATGTGCTGTTTGTGTTGTTGG
TGGTGAGAGGTCACTTGTGGCCAACTTGTCAGCTGCAAATTGTTACAAAT
CTGAGCACTTGAAGAGACCTGAAATATGGTCAATAGTTGAAAAGGCAAAA
TATTACTACATTGCTGGGTTTTTCCTTACCGTGTCTCCTGAGTCCATTCA
AATGGTTGCTGAACACGCTGCTGCTAAGAACAAGTCTTCATGATGAACCT
TTCTGCTCCATTTATCTGCGAGTTCTTCAGGGGAACACAGGAGAAAGCAT
TACGTACATGGACTA
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