FC920672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 286 LVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 L+ ++ + +EQ V + + + K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE F LGI P+ Sbjct: 58 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPK 184
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.276e-15 Identity = 53/179 (29.61%), Postives = 89/179 (49.72%), Query Frame = 1 Query: 169 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISP---------NSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 YST I+K + ++K+ +K + ++ L ++ D+ + +++E + K+ P + K V+ F+V L V P DI G RV +++ I LP + D M +EEKPD+++ D+GG QI ++EVVELP+ +PE F K+GI PP+ Sbjct: 7 YSTDIEKNKMDLKEFKEKTQ-IAELESKVLRLELKNK-DVTRENVQIKKENEILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPK 183
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.666e-15 Identity = 53/179 (29.61%), Postives = 88/179 (49.16%), Query Frame = 1 Query: 169 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISP---------NSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 YST ++K E ++K+ +K L ++ L ++ D+ + +++E + K+ P + K V+ F+V L V P DI G RV +++ + LP + D M +EEKPD+ + D+GG QI ++EVVELP+ +PE F K+GI PP+ Sbjct: 7 YSTDVQKNEMDLKEFKEKAY-LAELESKVLRLELKNK-DITRENVQIKKENEILKRELDKLRIPPLILGTVLDRVNERKAVVKSSTGPNFLVNLSQFVEPDDIVPGARVCLNQQTLAVVEVLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPK 183
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.666e-15 Identity = 53/179 (29.61%), Postives = 89/179 (49.72%), Query Frame = 1 Query: 169 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISP---------NSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 YST I+K + ++K+ +K + ++ L ++ D+ + +++E + K+ P + K V+ F+V L V P DI G RV +++ I LP + D M +EEKPD+++ D+GG QI ++EVVELP+ +PE F K+GI PP+ Sbjct: 7 YSTDIEKNKMDLKEFKEKTQ-IAELESKVLRLELKNK-DISRENVQIKKENEILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPK 183
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.666e-15 Identity = 36/104 (34.62%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 367 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 + ++++ ++VVG + V + + +G+RV +D I LP ++DP V M++E+ D+++ VGG EQI ++REV+ELP+ +PE F+++GI PP+ Sbjct: 64 DSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPK 167
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.176e-15 Identity = 38/91 (41.76%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 406 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 +FVV + + +++ G RV +D+ I LP + DPSV V E+P V+YND+GG +Q++++RE +ELP+ HPE F K+GI+PP+ Sbjct: 84 RFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIEPPK 174
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.176e-15 Identity = 46/140 (32.86%), Postives = 75/140 (53.57%), Query Frame = 1 Query: 286 LVSDKQMMQEEQPLQVARCTKIISPNS---------EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 L +DK+ ++ E +++ P + +D + ++ +FVV + + ++ G RV +D+ I LP + DPSV V EKP VTY D+GG + Q+ ++RE VELP+ HPE F K+GI+PP+ Sbjct: 34 LEADKERLERELSRLRTEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPK 173
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.176e-15 Identity = 53/179 (29.61%), Postives = 89/179 (49.72%), Query Frame = 1 Query: 169 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISP---------NSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 YST I+K + ++K+ +K + ++ L ++ D+ + +++E + K+ P + K V+ F+V L V P DI G RV +++ I LP + D M +EEKPD+++ D+GG QI ++EVVELP+ +PE F K+GI PP+ Sbjct: 7 YSTDIEKNKMDLKEFKEKTQ-IAELESKVLRLELKNK-DINRENVQIKKENEILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPK 183
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.176e-15 Identity = 52/179 (29.05%), Postives = 89/179 (49.72%), Query Frame = 1 Query: 169 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISP---------NSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 YST ++K + ++K+ +K + ++ L ++ D+ + +++E + K+ P + K V+ F+V L V P DI G RV +++ I LP + D M +EEKPD+++ D+GG QI ++EVVELP+ +PE F K+GI PP+ Sbjct: 7 YSTDVEKNKMDLKEFKEKTQ-IAELESKVLRLELKNK-DISRENVQIKKENEILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPK 183
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.176e-15 Identity = 39/91 (42.86%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 406 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 K++V + V+ +++ G+RV + + Y + LP K+DP V++M VE+ PD TY +GG EQI+++REV+ELP+ HPE F LGI P+ Sbjct: 141 KYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPK 231 The following BLAST results are available for this feature:
BLAST of FC920672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920672 ID=FC920672; Name=FC920672; organism=Citrus clementina; type=EST; length=748bpback to top |