FC920677

Overview
NameFC920677
Unique NameFC920677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15279 contig Ccv1_Contig15279:575..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_HAEIG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae (strain PittGG) GN=metE PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 4.678e-57
Identity = 105/153 (68.63%), Postives = 120/153 (78.43%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L GFAFT  GWVQSYGSRCVKPP+IYGDV RP+ MTV WS  AQS+T R MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLE AGI VIQIDE A+REGLPL++++   YL WA  +FR+++ GVQD TQIHTHMCYS F  +
Sbjct:  499 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVIRPEPMTVRWSQYAQSLTNRVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEAAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSSMGVQDDTQIHTHMCYSEFNDI 651
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_ACTPJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metE PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 6.110e-57
Identity = 104/153 (67.97%), Postives = 121/153 (79.08%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L GFAFT  GWVQSYGSRCVKPP+IYGDV+RP+ MTV WS  AQS+T + MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL WA  +FR++  GV+D TQIHTHMCYS F  +
Sbjct:  499 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVTRPEPMTVRWSQYAQSLTDKVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSYMGVKDDTQIHTHMCYSEFNDI 651
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_ACTP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metE PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 6.110e-57
Identity = 104/153 (67.97%), Postives = 121/153 (79.08%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L GFAFT  GWVQSYGSRCVKPP+IYGDV+RP+ MTV WS  AQS+T + MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL WA  +FR++  GV+D TQIHTHMCYS F  +
Sbjct:  499 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVTRPEPMTVRWSQYAQSLTDKVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSYMGVKDDTQIHTHMCYSEFNDI 651
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_ACTP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=metE PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 6.110e-57
Identity = 104/153 (67.97%), Postives = 121/153 (79.08%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L GFAFT  GWVQSYGSRCVKPP+IYGDV+RP+ MTV WS  AQS+T + MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL WA  +FR++  GV+D TQIHTHMCYS F  +
Sbjct:  499 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVTRPEPMTVRWSQYAQSLTDKVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSYMGVKDDTQIHTHMCYSEFNDI 651
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_HAES2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus somnus (strain 2336) GN=metE PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 7.979e-57
Identity = 104/153 (67.97%), Postives = 120/153 (78.43%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L GFAFT  GWVQSYGSRCVKPP+IYGDV RP+ MTV WS  AQS+T + MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL WA  +FR+++ GV D TQIHTHMCYS F  +
Sbjct:  500 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVVRPEPMTVRWSKYAQSLTKKVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDTYLQWAGEAFRLSSMGVADDTQIHTHMCYSEFNDI 652
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_COXBU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii GN=metE PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 7.979e-57
Identity = 102/153 (66.67%), Postives = 123/153 (80.39%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L G A T+NGWVQSYGSRCVKPPII+GDVSR + MT+ W   AQS+T + +KGMLTGPVTIL WSFVR+DQPR +T  QIALA++DEV+DLE++G+ VIQIDE A RE LPLRK+    YL+WAV  FR+ +CGV+D TQIHTHMCYS F  +
Sbjct:  502 LDGIAITSNGWVQSYGSRCVKPPIIFGDVSRERPMTLRWIEYAQSLTTKSVKGMLTGPVTILAWSFVRDDQPRSQTAKQIALALRDEVQDLERSGVRVIQIDEPAFRECLPLRKAAWQDYLEWAVKCFRLASCGVKDETQIHTHMCYSEFNDI 654
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_COXBR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metE PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 7.979e-57
Identity = 102/153 (66.67%), Postives = 123/153 (80.39%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L G A T+NGWVQSYGSRCVKPPII+GDVSR + MT+ W   AQS+T + +KGMLTGPVTIL WSFVR+DQPR +T  QIALA++DEV+DLE++G+ VIQIDE A RE LPLRK+    YL+WAV  FR+ +CGV+D TQIHTHMCYS F  +
Sbjct:  502 LDGIAITSNGWVQSYGSRCVKPPIIFGDVSRERPMTLRWIEYAQSLTTKSVKGMLTGPVTILAWSFVRDDQPRSQTAKQIALALRDEVQDLERSGVRVIQIDEPAFRECLPLRKAAWQDYLEWAVKCFRLASCGVKDETQIHTHMCYSEFNDI 654
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_COXBN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metE PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 7.979e-57
Identity = 102/153 (66.67%), Postives = 123/153 (80.39%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L G A T+NGWVQSYGSRCVKPPII+GDVSR + MT+ W   AQS+T + +KGMLTGPVTIL WSFVR+DQPR +T  QIALA++DEV+DLE++G+ VIQIDE A RE LPLRK+    YL+WAV  FR+ +CGV+D TQIHTHMCYS F  +
Sbjct:  502 LDGIAITSNGWVQSYGSRCVKPPIIFGDVSRERPMTLRWIEYAQSLTTKSVKGMLTGPVTILAWSFVRDDQPRSQTAKQIALALRDEVQDLERSGVRVIQIDEPAFRECLPLRKAAWQDYLEWAVKCFRLASCGVKDETQIHTHMCYSEFNDI 654
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_COXB2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuG_Q212) GN=metE PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 7.979e-57
Identity = 102/153 (66.67%), Postives = 123/153 (80.39%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L G A T+NGWVQSYGSRCVKPPII+GDVSR + MT+ W   AQS+T + +KGMLTGPVTIL WSFVR+DQPR +T  QIALA++DEV+DLE++G+ VIQIDE A RE LPLRK+    YL+WAV  FR+ +CGV+D TQIHTHMCYS F  +
Sbjct:  502 LDGIAITSNGWVQSYGSRCVKPPIIFGDVSRERPMTLRWIEYAQSLTTKSVKGMLTGPVTILAWSFVRDDQPRSQTAKQIALALRDEVQDLERSGVRVIQIDEPAFRECLPLRKAAWQDYLEWAVKCFRLASCGVKDETQIHTHMCYSEFNDI 654
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_COXB1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuK_Q154) GN=metE PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 7.979e-57
Identity = 102/153 (66.67%), Postives = 123/153 (80.39%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L G A T+NGWVQSYGSRCVKPPII+GDVSR + MT+ W   AQS+T + +KGMLTGPVTIL WSFVR+DQPR +T  QIALA++DEV+DLE++G+ VIQIDE A RE LPLRK+    YL+WAV  FR+ +CGV+D TQIHTHMCYS F  +
Sbjct:  502 LDGIAITSNGWVQSYGSRCVKPPIIFGDVSRERPMTLRWIEYAQSLTTKSVKGMLTGPVTILAWSFVRDDQPRSQTAKQIALALRDEVQDLERSGVRVIQIDEPAFRECLPLRKAAWQDYLEWAVKCFRLASCGVKDETQIHTHMCYSEFNDI 654
The following BLAST results are available for this feature:
BLAST of FC920677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_HAEIG4.678e-5768.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTPJ6.110e-5767.975-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTP76.110e-5767.975-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTP26.110e-5767.975-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAES27.979e-5767.975-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBU7.979e-5766.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBR7.979e-5766.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBN7.979e-5766.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXB27.979e-5766.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXB17.979e-5766.675-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32011F03EF RVDevelop1 Citrus clementina cDNA clone C32011F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920677 ID=FC920677; Name=FC920677; organism=Citrus clementina; type=EST; length=489bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CACGACATTATCCACTCATATCGACATGATGCTGATGTG
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