FC920680
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: EFTU2_THETN (Elongation factor Tu-B OS=Thermoanaerobacter tengcongensis GN=tufB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.903e-11 Identity = 49/134 (36.57%), Postives = 69/134 (51.49%), Query Frame = 3 Query: 258 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHL 659 +N+GTIGHV HGK+T+ AI+ + + K G A AK Y E D+ P KA G + +E + RH + VDCPGH + M+ GAA MDGA+L+++A + P P T EH+ Sbjct: 13 VNVGTIGHVDHGKTTLTAAITLILS-------------KAGLAQAKGYD-EIDKAPEE---KARGITINTTHV----EYETAK----RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG-PMPQTREHI 120
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: EFTU1_THETN (Elongation factor Tu-A OS=Thermoanaerobacter tengcongensis GN=tufA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.903e-11 Identity = 49/134 (36.57%), Postives = 69/134 (51.49%), Query Frame = 3 Query: 258 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHL 659 +N+GTIGHV HGK+T+ AI+ + + K G A AK Y E D+ P KA G + +E + RH + VDCPGH + M+ GAA MDGA+L+++A + P P T EH+ Sbjct: 13 VNVGTIGHVDHGKTTLTAAITLILS-------------KAGLAQAKGYD-EIDKAPEE---KARGITINTTHV----EYETAK----RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG-PMPQTREHI 120
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: EFTU_AQUPY (Elongation factor Tu OS=Aquifex pyrophilus GN=tuf PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11 Identity = 48/135 (35.56%), Postives = 66/135 (48.89%), Query Frame = 3 Query: 258 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCED-DRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHL 659 +N+GTIGHV HGKST+ AI+ V AK +K E+ D+ P KE ++ E K RH + VDCPGH + M+ GAA MDGA+L+++A + P P T EH+ Sbjct: 13 VNVGTIGHVDHGKSTLTSAITCVLAAGLVEG-----------GKAKCFKYEEIDKAPEE---------KERGITINITHVEYETAK--RHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADG-PMPQTREHV 124
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: EFTU_AQUAE (Elongation factor Tu OS=Aquifex aeolicus GN=tufA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11 Identity = 48/135 (35.56%), Postives = 66/135 (48.89%), Query Frame = 3 Query: 258 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCED-DRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHL 659 +N+GTIGHV HGKST+ AI+ V AK +K E+ D+ P KE ++ E K RH + VDCPGH + M+ GAA MDGA+L+++A + P P T EH+ Sbjct: 13 VNVGTIGHVDHGKSTLTSAITCVLAAGLVEG-----------GKAKCFKYEEIDKAPEE---------KERGITINITHVEYETAK--RHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADG-PMPQTREHV 124
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: EFTU_TREHY (Elongation factor Tu OS=Treponema hyodysenteriae GN=tuf PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11 Identity = 46/137 (33.58%), Postives = 70/137 (51.09%), Query Frame = 3 Query: 258 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYAN-AKIYKCEDDRCPRPMCYKA--YGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHL 659 +N+GTIGHV HGK+T+ AI+ V + F ++ K+ Y + AK + + R P + A + + DN RH + VDCPGH + M+ GAA MDGA+L+++A + P T EH+ Sbjct: 13 VNVGTIGHVDHGKTTLTSAITAVSSAMFPATVQ-----KVAYDSVAKASESQGRRDPTKILTIATSHVEYESDN----------------RHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAEDGV-MPQTKEHV 127
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: EFTU_BRAHW (Elongation factor Tu OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=tuf PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11 Identity = 46/137 (33.58%), Postives = 70/137 (51.09%), Query Frame = 3 Query: 258 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYAN-AKIYKCEDDRCPRPMCYKA--YGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHL 659 +N+GTIGHV HGK+T+ AI+ V + F ++ K+ Y + AK + + R P + A + + DN RH + VDCPGH + M+ GAA MDGA+L+++A + P T EH+ Sbjct: 13 VNVGTIGHVDHGKTTLTSAITAVSSAMFPATVQ-----KVAYDSVAKASESQGRRDPTKILTIATSHVEYESDN----------------RHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAEDGV-MPQTKEHV 127
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: EFTU_GRAFK (Elongation factor Tu OS=Gramella forsetii (strain KT0803) GN=tuf PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11 Identity = 48/134 (35.82%), Postives = 64/134 (47.76%), Query Frame = 3 Query: 258 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHL 659 +NIGTIGHV HGK+T+ AI+ V GY+ A + + D P KE + E K RH + VDCPGH + M+ GAA MDGA+L++AA + P P T EH+ Sbjct: 13 LNIGTIGHVDHGKTTLTAAITKVMA-------------DAGYSEASAFD-QIDNAPEE---------KERGITINSSHVEYSTEK--RHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDG-PMPQTREHI 120 The following BLAST results are available for this feature:
BLAST of FC920680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920680 ID=FC920680; Name=FC920680; organism=Citrus clementina; type=EST; length=701bpback to top |