FC920691

Overview
NameFC920691
Unique NameFC920691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.191e-69
Identity = 126/221 (57.01%), Postives = 165/221 (74.66%), Query Frame = 1
Query:   58 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            + +++  G A ILAIGTA P N + Q  YPD+YFR+TNS+H+   K+KF+RIC KS ++KR+  +TE++LKKNPN+C Y+ +SL++RQDILV EVPKLG+EAA KAIKEWG+  S+ITHL+FC+  GVDMPGAD+QL K+LGL+ SV R+M+Y QGC  GA  +R+AKD AENN G RVLVVCS++ L  FRGPS      L  Q      +AA+I+G  P
Sbjct:   14 RREKRFDGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEYKEKFRRICNKSKIRKRHLVITEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTSSGVDMPGADFQLAKLLGLSSSVNRLMMYQQGCNAGAVMLRLAKDLAENNKGGRVLVVCSEVMLSVFRGPSLQQEDNLLAQCLFGDGSAAVIVGTEP 234          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: VPS_PSINU (Phloroisovalerophenone synthase OS=Psilotum nudum GN=VPS PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.167e-69
Identity = 124/221 (56.11%), Postives = 167/221 (75.57%), Query Frame = 1
Query:   58 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            + +++  G  ++LAIG+ANPPN  +Q+ +PD+YF +T S+HM  +K KF R+C KS +KKR  H+ EDIL+ +P+I +Y  +SLD RQD+LV EVPKLG+ AA  AI EWGQ KS ITHLIFC+  G+DMPGAD+ L K+LGL P+V RVM+Y QGC+ G T +R+AKD AENN G+R+LVVCS+L+L +FRGP++ +   L GQA     AAALI+GA+P
Sbjct:   15 RKKERASGPVSVLAIGSANPPNVFHQSLFPDFYFNITQSNHMAEVKAKFTRMCAKSGIKKRRMHINEDILEAHPSIRSYHDNSLDVRQDMLVEEVPKLGKVAADNAIAEWGQPKSNITHLIFCTSSGIDMPGADWALMKLLGLRPTVNRVMVYQQGCFAGCTVLRIAKDLAENNKGSRILVVCSELTLISFRGPTEDHPENLVGQALFGDGAAALIVGADP 235          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSB_IPOPU (Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.443e-69
Identity = 126/214 (58.88%), Postives = 164/214 (76.64%), Query Frame = 1
Query:   79 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            G A ILAIGTA P + + Q  YPD+YFR+TNS H+   K+KF+RIC KS ++KR+  +TE++LKKNPN+C Y+ +SL++RQDILV EVPKLG+EAA KAIKEWG+  S+ITHL+FC+  GVDMPGAD+QLTK+LGLN SVKR+M+Y QGC  GA  +R+AKD AE+N G RVLVVC+++++  FRGPS      L  Q      AAA+I+ A+P
Sbjct:   21 GDAKILAIGTATPASWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAESNKGGRVLVVCAEITINIFRGPSLEQDDNLLAQCLFGDGAAAMIVAADP 234          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSB_IPONI (Chalcone synthase B (Fragment) OS=Ipomoea nil GN=CHSB PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.108e-69
Identity = 126/214 (58.88%), Postives = 163/214 (76.17%), Query Frame = 1
Query:   79 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            G A I AIGTA P N + Q  YPD+YFR+TNS H+   K+KF+RIC KS ++KR+  +TE++LKKNPN+C Y+ +SL++RQDILV EVPKLG+EAA KAIKEWG+  S+ITHL+FC+  GVDMPGAD+QLTK+LGLN SVKR+M+Y QGC  GA  +R+AKD AE+N G RVLVVC+++++  FRGPS      L  Q      AAA+I+ A+P
Sbjct:   21 GDAKIWAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDILVAEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAESNKGGRVLVVCAEITINIFRGPSLEQDDNLLAQCLFGDGAAAMIVAADP 234          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.284e-69
Identity = 126/214 (58.88%), Postives = 161/214 (75.23%), Query Frame = 1
Query:   79 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            G A ILAIGTA P N + Q  YPD+YFR+TNS+H+   K+KF+RIC KS ++KR+  +TE++LKKNPN+C Y+ +SL++RQDILV EVPKLG+EAA KAIKEWG+  S+ITHL+FC+  GVDMPGAD+QL K+LGL+ SV R+M+Y QGC  GA  +R+AKD AENN G RVLVVCS++ L  FRGPS      L  Q      +AA+I+G  P
Sbjct:   18 GHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVITEELLKKNPNLCTYNEASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTSSGVDMPGADFQLAKLLGLSSSVNRLMMYQQGCNAGAAMLRLAKDLAENNKGGRVLVVCSEVMLNVFRGPSLEQEDYLLAQCLFGDGSAAVIVGTEP 231          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.584e-68
Identity = 123/214 (57.48%), Postives = 164/214 (76.64%), Query Frame = 1
Query:   79 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            G A ILAIGTA P N + Q  YPD+YFR+TNS H+   K+KF+RIC KS ++KR+  +TE++L+KNP++C Y+ +SL++RQDILV EVPKLG+EAA KAIKEWG+  S+ITHL+FC+  GVDMPGAD++LTK+LGLN SVKR+M+Y QGC  GA  +R+AKD AE+N G R+LVVCS++++  FRGPS      L  Q      +AA+I+G +P
Sbjct:   23 GYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLQKNPSLCTYNETSLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFRLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAESNKGGRILVVCSEITINIFRGPSLEQDDNLLAQCLFGDGSAAMIVGTDP 236          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSA_IPOCO (Chalcone synthase A (Fragment) OS=Ipomoea cordatotriloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.068e-68
Identity = 125/214 (58.41%), Postives = 162/214 (75.70%), Query Frame = 1
Query:   79 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            G A +LAIGTA P N + QA YPD+YFR+TNS+H+   K+KF+RIC KS ++KR+  +TE++LK+NPN+C Y+ +SL++RQDILV EVPKLG+EAA KAIKEWG+  S+ITHL+FC+  GVDMPGAD+QLTK+LGLN SVKR+M+Y QGC  GA  +R+ K  AENN G RVLVVCS +++  FRGPS      L  Q      +AA+I G +P
Sbjct:   19 GHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVLTEELLKENPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLVKGLAENNKGARVLVVCSGITINIFRGPSLEQDDNLLAQCLFGDGSAAMIDGKDP 232          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTR (Chalcone synthase A (Fragment) OS=Ipomoea triloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.701e-68
Identity = 124/214 (57.94%), Postives = 163/214 (76.17%), Query Frame = 1
Query:   79 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            G A +LAIGTA P N + QA YPD+YFR+TNS+ +   K+KF+RIC KS ++ R+  +TE++LKK+PN+C Y+ +SL++RQDILV EVPKLG+EAA KAIKEWG+  S+ITHL+FC+  GVDMPGAD+QLTK+LGLN SVKR+M+Y QGC  GA  +R+ KD AENN G RVLVVCS++++  FRGPS      L  Q      +AA+I+G +P
Sbjct:   19 GHAKLLAIGTATPTNWVDQATYPDFYFRITNSERLLEHKEKFRRICNKSKIRFRHLVLTEELLKKSPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLVKDLAENNKGARVLVVCSEITINIFRGPSLEQDDNLLAQCLFGDGSAAMIVGKDP 232          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: BBS_PHASS (Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.387e-64
Identity = 119/221 (53.85%), Postives = 163/221 (73.76%), Query Frame = 1
Query:   58 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            K   +  G A+ILAIG ANP N I Q+ YPD+YFRVTNS+H+  LK+KF+RICEK+ ++KR+F   E+ L  NP    +   SL+ RQ++ + E+PKLG +AATKAI++WGQ KS+ITHLIFC+  G+D+PGADYQLT++LGLNP+V+RVMLY QGC+ G T +R+AK  AE+  G RVLVVC++ +   FR PS+ +   L  QA  +  A+A+I+GA+P
Sbjct:    8 KKAPRADGFASILAIGRANPDNIIEQSAYPDFYFRVTNSEHLVDLKKKFQRICEKTAIRKRHFVWNEEFLTANPCFSTFMDKSLNVRQEVAISEIPKLGAKAATKAIEDWGQPKSRITHLIFCTTSGMDLPGADYQLTQILGLNPNVERVMLYQQGCFAGGTTLRLAKCLAESRKGARVLVVCAETTTVLFRAPSEEHQDDLVTQALFADGASAVIVGADP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSY_PERAE (Chalcone synthase OS=Persea americana GN=CHS PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.073e-60
Identity = 122/229 (53.28%), Postives = 157/229 (68.56%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYY-FRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V+  +  Q+  G ATI+AIGT+ PPN + Q++YPDYY F    +      ++ FKR+CEKS +KKRY ++TE   K+           L +RQD++V EVPKLG+E   KAIK  GQ KS+I  L+FC+  GVDMPGADYQLTK+ GL PSVKR+M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPSD +L  L GQA     AAALI+GA+P
Sbjct:    1 MVNVEAIRKVQRAEGPATIMAIGTSTPPNAVDQSEYPDYYYFGSPTASTRPSSRRSFKRMCEKSMIKKRYMYLTETYWKRIQMFVPTWLLPLKARQDMVVVEVPKLGKEVQPKAIKGMGQPKSKINPLVFCTTSGVDMPGADYQLTKVFGLPPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAALIVGADP 229          
The following BLAST results are available for this feature:
BLAST of FC920691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSC_IPOPU3.191e-6957.01Chalcone synthase C (Fragment) OS=Ipomoea purpurea... [more]
VPS_PSINU4.167e-6956.11Phloroisovalerophenone synthase OS=Psilotum nudum ... [more]
CHSB_IPOPU5.443e-6958.88Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE... [more]
CHSB_IPONI7.108e-6958.88Chalcone synthase B (Fragment) OS=Ipomoea nil GN=C... [more]
CHSA_IPONI9.284e-6958.88Chalcone synthase A (Fragment) OS=Ipomoea nil GN=C... [more]
CHSB_IPOTR1.584e-6857.48Chalcone synthase B (Fragment) OS=Ipomoea triloba ... [more]
CHSA_IPOCO2.068e-6858.41Chalcone synthase A (Fragment) OS=Ipomoea cordatot... [more]
CHSA_IPOTR2.701e-6857.94Chalcone synthase A (Fragment) OS=Ipomoea triloba ... [more]
BBS_PHASS1.387e-6453.85Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 ... [more]
CHSY_PERAE2.073e-6053.28Chalcone synthase OS=Persea americana GN=CHS PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC32011G11EF RVDevelop1 Citrus clementina cDNA clone C32011G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920691 ID=FC920691; Name=FC920691; organism=Citrus clementina; type=EST; length=720bp
GGAGACGTGTTCATCAAAATCTCGGTTGAATATATAATGGAGAAAGTTAA
AGATGGGAAGAACCAACAGCAAGGAGGAGGGTTAGCCACGATCCTAGCCA
TCGGCACTGCAAATCCACCAAACTGCATATACCAAGCTGACTACCCTGAT
TATTACTTCCGTGTCACCAACAGTGACCACATGACTCTCCTCAAACAAAA
ATTCAAACGCATCTGCGAGAAATCAAATGTGAAGAAACGCTACTTCCATG
TTACCGAAGATATTCTCAAAAAGAACCCAAATATATGTGCCTACGACGGC
TCCTCCCTCGATAGCCGTCAAGATATATTGGTTAGGGAAGTACCGAAACT
TGGCGAGGAAGCGGCAACAAAAGCAATCAAAGAATGGGGCCAATCAAAAT
CCCAGATCACGCATCTCATTTTCTGCTCACTTGTGGGCGTAGACATGCCC
GGGGCTGACTATCAGCTGACCAAAATGTTGGGCCTCAACCCATCTGTCAA
ACGAGTCATGCTATACTTTCAAGGCTGTTACATTGGCGCCACAGCCATCC
GAATGGCCAAGGACTTTGCTGAAAACAACCCTGGTACCCGCGTTCTAGTC
GTATGCTCTGACTTATCCCTTGGTACTTTCCGTGGACCTTCTGATGCCAA
CTTAGGCTGCCTTGCAGGCCAAGCCCCCTCTTCGCGACGCGCCGCAGCTT
TAATCATTGGCGCTAATCCT
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