FC920691

Overview
NameFC920691
Unique NameFC920691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSY_DIACA (Chalcone synthase OS=Dianthus caryophyllus GN=CHS PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.293e-82
Identity = 144/228 (63.16%), Postives = 182/228 (79.82%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  +++ +   +  G ATILAIGTA PPN IYQADYPDYYFRVT S+HMT LK+KF+R+C+KS +KKRY ++TE+ILK+NPN+C Y GSSLD+RQD++V EVP+LG+EAA KAIKEWGQ KS+ITH+I C+  GVDMPGADYQLTK+LGL PSV+R MLY QGC+ G T +R+AKD AENN   RVLVVCS+++   FRGP++A L  + GQA     A ALI+G++P
Sbjct:    1 MASIEEIRQAPRADGPATILAIGTATPPNAIYQADYPDYYFRVTKSEHMTELKEKFRRMCDKSMIKKRYMYLTEEILKENPNLCEYMGSSLDTRQDMVVSEVPRLGKEAAVKAIKEWGQPKSKITHVIMCTTSGVDMPGADYQLTKLLGLRPSVRRFMLYQQGCFAGGTVLRLAKDLAENNKDARVLVVCSEITAICFRGPTEAALDSMVGQALFGDGAGALIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.293e-82
Identity = 141/225 (62.67%), Postives = 182/225 (80.89%), Query Frame = 1
Query:   46 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            V++ +  Q+  G AT+LAIGTA P NC+YQADYPDYYFR+T S+H+T LK+KFKR+C+KS ++KRY H+TE+ L +NP++CAY   SLD+RQD++V EVPKLG+ AA KAIKEWGQ KS+ITHL+FC+  GVDMPGADYQLTK LGL PSV R+M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPS+++L  L GQA     AAA+++GA+P
Sbjct:    8 VEEVRKAQRATGPATVLAIGTATPANCVYQADYPDYYFRITKSEHLTDLKEKFKRMCDKSMIRKRYMHLTEEFLAENPSMCAYMAPSLDARQDVVVVEVPKLGKAAAQKAIKEWGQPKSRITHLVFCTTSGVDMPGADYQLTKALGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAVVVGADP 232          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS3_GERHY (Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.606e-82
Identity = 142/221 (64.25%), Postives = 180/221 (81.45%), Query Frame = 1
Query:   58 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            +  Q+  G ATILAIGTA P NC+YQADYPDYYFRVT S+HM  LK+KF+R+C+KS ++KRY H+TE+ LK+NP++C +   SLD+RQD++V EVPKLG+EAATKAIKEWG  KS+ITHL+FC+  GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGP++ +L  L GQA     AAA+IIG++P
Sbjct:   14 RKAQRAEGPATILAIGTATPANCVYQADYPDYYFRVTESEHMVDLKEKFQRMCDKSMIRKRYMHITEEFLKENPSMCKFMAPSLDARQDLVVVEVPKLGKEAATKAIKEWGFPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNEGHLDSLVGQALFGDGAAAVIIGSDP 234          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSY_PINST (Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 9.563e-82
Identity = 142/229 (62.01%), Postives = 184/229 (80.35%), Query Frame = 1
Query:   34 IMEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            +M  ++  +  Q+  G ATILAIGTA PPN + Q+ YPDYYF++TNS+HMT LK+KF+R+C+KS +KKRY ++TE+IL +NP++CAY   SLD+RQD++V EVP+LG+EAA KAIKEWGQ KS+ITH+IFC+  GVDMPGADYQ+TK+LGL PSVKRVM+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPSD +L  + GQA     A ALI+GA+P
Sbjct:    5 MMADLEAFRKAQRADGPATILAIGTATPPNAVDQSTYPDYYFKITNSEHMTELKEKFRRMCDKSGIKKRYMYLTEEILNENPSVCAYMAPSLDARQDMVVVEVPRLGKEAAAKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQMTKLLGLRPSVKRVMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSMVGQALFGDGARALIVGADP 233          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 9.563e-82
Identity = 144/225 (64.00%), Postives = 180/225 (80.00%), Query Frame = 1
Query:   46 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            V++ +  Q+  G AT+LAIGTA P NC+YQADYPDYYF++T SDHM  LK+KFKR+C+KS ++KRY H+TE+IL+ NPN+CAY   SLD+RQDI+V EVPKLG+ AA KAIKEWGQ +S+ITHL+FC+  GVDMPGADYQLTKMLGL PSVKR+M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGP +     L GQA     AAA+I+GA+P
Sbjct:    7 VEEVRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYMHLTEEILQDNPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPHE--FDSLVGQALFGDGAAAVIVGADP 229          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSD_IPONI (Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.249e-81
Identity = 144/228 (63.16%), Postives = 182/228 (79.82%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V++ +  Q+  G ATILAIGTA P NC+ Q+ YPDYYFR+TNSDHMT LKQKF+R+C+KS + KRY H+TE+ILK+NP+ C Y   SLD+RQDI+V EVPKLG+EAA  AIKEWGQ KS+ITH+IFC+  GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AENN   RVLVVCS++++ TFRGP++ +L  L GQA     AAA+I+G++P
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPANCVDQSTYPDYYFRITNSDHMTDLKQKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIVVVEVPKLGKEAAQSAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRVAKDLAENNKAARVLVVCSEITVVTFRGPNETHLDSLVGQALFGDGAAAIIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.249e-81
Identity = 142/228 (62.28%), Postives = 183/228 (80.26%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            ME+++     Q+  G A +LAIGT+ PPN +YQADYPDYYFR+T S+H+T LK+KFKR+C+KS +KKRY ++TE+ILK+NPNICA+   SLD+RQDI+V EVPKL +EAA +AIKEWG  KS+ITHLIFC+  G+DMPGADYQLT++LGL PSV R MLY QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPS+++L  L GQA     AAA+I+G++P
Sbjct:    5 MEEIRQA---QRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAARAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDP 229          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.249e-81
Identity = 142/228 (62.28%), Postives = 183/228 (80.26%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            ME+++     Q+  G A +LAIGT+ PPN +YQADYPDYYFR+T S+H+T LK+KFKR+C+KS +KKRY ++TE+ILK+NPNICA+   SLD+RQDI+V EVPKL +EAA +AIKEWG  KS+ITHLIFC+  G+DMPGADYQLT++LGL PSV R MLY QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPS+++L  L GQA     AAA+I+G++P
Sbjct:    5 MEEIRQA---QRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDP 229          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS3_BROFI (Chalcone synthase 3 OS=Bromheadia finlaysoniana GN=CHS3 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.249e-81
Identity = 142/228 (62.28%), Postives = 183/228 (80.26%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            ME+++     Q+  G A +LAIGT+ PPN +YQADYPDYYFR+T S+H+T LK+KFKR+C+KS +KKRY ++TE+ILK+NPNICA+   SLD+RQDI+V EVPKL +EAA +AIKEWG  KS+ITHLIFC+  G+DMPGADYQLT++LGL PSV R MLY QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPS+++L  L GQA     AAA+I+G++P
Sbjct:    5 MEEIRQA---QRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDP 229          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSA_PEA (Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.130e-81
Identity = 143/228 (62.72%), Postives = 180/228 (78.95%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V + +  Q+  G AT+ AIGTA P NC+ Q+ YPD+YFR+TNS H T LK+KF+R+C+KS +KKRY H+TE+ILK+NP++C Y   SLD+RQD++V EVPKLG+EAATKAIKEWGQ KS+ITHLIFC+  GVDMPGADYQLTK+LGL P VKR M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPSD +L  L GQA     AAA+I+G++P
Sbjct:    1 MVTVNEIRQAQRAEGPATVFAIGTATPQNCVEQSTYPDFYFRITNSQHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPSLCEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDP 228          
The following BLAST results are available for this feature:
BLAST of FC920691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSY_DIACA4.293e-8263.16Chalcone synthase OS=Dianthus caryophyllus GN=CHS ... [more]
CHS2_MAIZE4.293e-8262.67Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHS3_GERHY5.606e-8264.25Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=... [more]
CHSY_PINST9.563e-8262.01Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=... [more]
CHS1_SECCE9.563e-8264.00Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3... [more]
CHSD_IPONI1.249e-8163.16Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV... [more]
CHS8_BROFI1.249e-8162.28Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]
CHS4_BROFI1.249e-8162.28Chalcone synthase 4 OS=Bromheadia finlaysoniana GN... [more]
CHS3_BROFI1.249e-8162.28Chalcone synthase 3 OS=Bromheadia finlaysoniana GN... [more]
CHSA_PEA2.130e-8162.72Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE... [more]

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Properties
Property NameValue
Genbank descriptionC32011G11EF RVDevelop1 Citrus clementina cDNA clone C32011G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920691 ID=FC920691; Name=FC920691; organism=Citrus clementina; type=EST; length=720bp
GGAGACGTGTTCATCAAAATCTCGGTTGAATATATAATGGAGAAAGTTAA
AGATGGGAAGAACCAACAGCAAGGAGGAGGGTTAGCCACGATCCTAGCCA
TCGGCACTGCAAATCCACCAAACTGCATATACCAAGCTGACTACCCTGAT
TATTACTTCCGTGTCACCAACAGTGACCACATGACTCTCCTCAAACAAAA
ATTCAAACGCATCTGCGAGAAATCAAATGTGAAGAAACGCTACTTCCATG
TTACCGAAGATATTCTCAAAAAGAACCCAAATATATGTGCCTACGACGGC
TCCTCCCTCGATAGCCGTCAAGATATATTGGTTAGGGAAGTACCGAAACT
TGGCGAGGAAGCGGCAACAAAAGCAATCAAAGAATGGGGCCAATCAAAAT
CCCAGATCACGCATCTCATTTTCTGCTCACTTGTGGGCGTAGACATGCCC
GGGGCTGACTATCAGCTGACCAAAATGTTGGGCCTCAACCCATCTGTCAA
ACGAGTCATGCTATACTTTCAAGGCTGTTACATTGGCGCCACAGCCATCC
GAATGGCCAAGGACTTTGCTGAAAACAACCCTGGTACCCGCGTTCTAGTC
GTATGCTCTGACTTATCCCTTGGTACTTTCCGTGGACCTTCTGATGCCAA
CTTAGGCTGCCTTGCAGGCCAAGCCCCCTCTTCGCGACGCGCCGCAGCTT
TAATCATTGGCGCTAATCCT
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