FC920925
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_YERPP (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis (strain Pestoides F) GN=lldD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 52/160 (32.50%), Postives = 75/160 (46.88%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A+ LP + + GGA +E TL+ N I R R+L ++S + L T + + P+++ P + GEV ARAA LS S IEEVA + ++QLYV K R + RA+ G K LV T D P G R D Sbjct: 8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_YERPN (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=lldD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 52/160 (32.50%), Postives = 75/160 (46.88%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A+ LP + + GGA +E TL+ N I R R+L ++S + L T + + P+++ P + GEV ARAA LS S IEEVA + ++QLYV K R + RA+ G K LV T D P G R D Sbjct: 8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_YERPG (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Angola) GN=lldD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 52/160 (32.50%), Postives = 75/160 (46.88%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A+ LP + + GGA +E TL+ N I R R+L ++S + L T + + P+++ P + GEV ARAA LS S IEEVA + ++QLYV K R + RA+ G K LV T D P G R D Sbjct: 8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_YERPE (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis GN=lldD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 52/160 (32.50%), Postives = 75/160 (46.88%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A+ LP + + GGA +E TL+ N I R R+L ++S + L T + + P+++ P + GEV ARAA LS S IEEVA + ++QLYV K R + RA+ G K LV T D P G R D Sbjct: 8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_YERPB (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=lldD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 52/160 (32.50%), Postives = 75/160 (46.88%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A+ LP + + GGA +E TL+ N I R R+L ++S + L T + + P+++ P + GEV ARAA LS S IEEVA + ++QLYV K R + RA+ G K LV T D P G R D Sbjct: 8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_YERPA (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=lldD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 52/160 (32.50%), Postives = 75/160 (46.88%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A+ LP + + GGA +E TL+ N I R R+L ++S + L T + + P+++ P + GEV ARAA LS S IEEVA + ++QLYV K R + RA+ G K LV T D P G R D Sbjct: 8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_YERP3 (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=lldD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 52/160 (32.50%), Postives = 75/160 (46.88%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A+ LP + + GGA +E TL+ N I R R+L ++S + L T + + P+++ P + GEV ARAA LS S IEEVA + ++QLYV K R + RA+ G K LV T D P G R D Sbjct: 8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRD 167 The following BLAST results are available for this feature:
BLAST of FC920925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920925 ID=FC920925; Name=FC920925; organism=Citrus clementina; type=EST; length=698bpback to top |