FC920926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: GSP1_ENCCU (GTP-binding nuclear protein GSP1 OS=Encephalitozoon cuniculi GN=GSP1 PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.439e-41 Identity = 87/185 (47.03%), Postives = 119/185 (64.32%), Query Frame = 1 Query: 100 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK-IRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQVTFH--RKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID 642 ++K+ ++GDGG GKTT++ R L G FEK Y T+G HP+ F + G I+F WDTAGQEK L+D YYI AI FDVT+R+T +N+ W ++ V N PIV+C NK+D+KNRQ +K++ + KN +Y+EISAK+ +NF PFL+LAR G P+L FV + L P EV D Sbjct: 7 TYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAGQEKKAVLKDVYYIGASGAIFFFDVTSRITCQNLARWVKEFQAVVGNEAPIVVCANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLARIFTGRPDLIFVSNVNLEPTEVNYD 191
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB7A_RABIT (Ras-related protein Rab-7a OS=Oryctolagus cuniculus GN=RAB7A PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.775e-24 Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 570 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB7A_RAT (Ras-related protein Rab-7a OS=Rattus norvegicus GN=Rab7a PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24 Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 570 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB7A_PONAB (Ras-related protein Rab-7a OS=Pongo abelii GN=RAB7A PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24 Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 570 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB7A_MOUSE (Ras-related protein Rab-7a OS=Mus musculus GN=Rab7a PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24 Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 570 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB7A_HUMAN (Ras-related protein Rab-7a OS=Homo sapiens GN=RAB7A PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24 Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 570 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB7A_CANFA (Ras-related protein Rab-7a OS=Canis familiaris GN=RAB7A PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24 Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 570 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB7A_BOVIN (Ras-related protein Rab-7a OS=Bos taurus GN=RAB7A PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.435e-23 Identity = 57/162 (35.19%), Postives = 90/162 (55.56%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 570 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F + R Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIVR 171
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB23_HUMAN (Ras-related protein Rab-23 OS=Homo sapiens GN=RAB23 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22 Identity = 57/179 (31.84%), Postives = 90/179 (50.28%), Query Frame = 1 Query: 100 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVD------VKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPAL 618 + K+V+VG+G GK++ ++R+ G F K Y+ TIGV+ N +R WDTAGQE+F + YY Q +++F T R +++ V +W + +IP VL NK+D +KN + +A ++ L++Y S K + N + F YLA K E P L Sbjct: 9 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIPTVLVQNKIDLLDDSCIKNEEAEA----LAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQIAEDPEL 183
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB19_XENTR (Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21 Identity = 62/191 (32.46%), Postives = 100/191 (52.36%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGDPNLHF-----------VESPALAPPE 630 FK++++GD GKT V R +G F + TIGV+ + N K++ WDTAGQE+F + YY AII +D+T R ++++VP W + + N+ ++L GNK D+ + RQ+ ++ +K+ L E SAK ++N ++ FL +A++L H+ P LAPPE Sbjct: 16 FKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKELIARNTFHYHSESPRNSFMLDSKPVLAPPE 206 The following BLAST results are available for this feature:
BLAST of FC920926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920926 ID=FC920926; Name=FC920926; organism=Citrus clementina; type=EST; length=689bpback to top |