BQ622924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_HELHP (30S ribosomal protein S9 OS=Helicobacter hepaticus GN=rpsI PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22 Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 2 Query: 104 IFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 ++ TG+RK AIA+V L G+GK IN + ++L G+ + PL+ E S D+ GGG S QA+A+ G+++AL R+ LK +GLLTRDSRVVERKK G KAR++PQ+SKR Sbjct: 4 VYATGKRKTAIAKVWLTSGSGKLNINGQSLNDWLGGHEAIKMKVMQPLILTKQEKSVDIHAVTLGGGYSAQAEALRHGISKALNAYDVAFRAMLKPKGLLTRDSRVVERKKYGKRKARRSPQFSKR 129
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_CHLAB (30S ribosomal protein S9 OS=Chlamydophila abortus GN=rpsI PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22 Identity = 60/125 (48.00%), Postives = 79/125 (63.20%), Query Frame = 2 Query: 113 TGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKV--PLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 TGRRK A++ V L+ GTGK +N + EY PL +Q + + PL LGY +D+ ++ +GGG+ GQ A LG+ARALLK + D + LK G LTRD R ERKK G KARK+ Q+SKR Sbjct: 12 TGRRKQAVSSVRLRPGTGKIDVNGKAFDEYF---PLEIQRVTILSPLKVLGYSNDFDLVIRINGGGIQGQVIATRLGLARALLKKNVDSKQELKSHGFLTRDPRKKERKKYGHKKARKSFQFSKR 133
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BORPD (30S ribosomal protein S9 OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=rpsI PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22 Identity = 53/125 (42.40%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK ++ARV +++G+GK I+N + E+ ++ PL G+ S+D+ V HGGG +GQA A+ G+ RAL+ D + L + G +TRD+R VERKK G KAR+ Q+SKR Sbjct: 7 YGTGRRKTSVARVFIKKGSGKIIVNGKPVDEFF-ARETGRMIVRQPLELTGHLESFDIKVNVHGGGETGQAGAVRHGITRALIDYDADLKPALSQAGFVTRDAREVERKKVGFRKARRRKQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RR9_ODOSI (30S ribosomal protein S9, chloroplastic OS=Odontella sinensis GN=rps9 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22 Identity = 55/108 (50.93%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 158 GTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 G G +IN ++YLQ N +L+ I PL L E +D+ GGGL+GQ ++I LGVAR L +++ +RS LK G LTRD+R+ ERKK GL KARKAPQYSKR Sbjct: 31 GEGNIVINKVSGEKYLQYNLTYLKDIWAPLKELNLEKQFDIIALVRGGGLTGQTESIQLGVARLLCQMNPQNRSVLKPFGFLTRDARIKERKKYGLRKARKAPQYSKR 138
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_THIDA (30S ribosomal protein S9 OS=Thiobacillus denitrificans (strain ATCC 25259) GN=rpsI PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22 Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK ++ARV ++ G+GK ++N + EY ++ PLV +D+ V GGG SGQA A+ G+ RAL+ + + LK GL+TRD+R VERKK G HKAR+ Q+SKR Sbjct: 7 YGTGRRKSSVARVFIKAGSGKIVVNDKPVDEYFS-RETGRMIVRQPLVLTDNLNRFDIMVNVAGGGESGQAGAVRHGITRALIDLDAGMKPTLKAAGLVTRDAREVERKKVGFHKARRRKQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_RALME (30S ribosomal protein S9 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=rpsI PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22 Identity = 55/125 (44.00%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK A+ARV ++ G G I+N + KEY L ++ PL + ++D+ V GGG +GQA A+ G+ RAL+ + L K G +TRD+R VERKK GLHKAR+ Q+SKR Sbjct: 7 YGTGRRKSAVARVFIKSGKGDIIVNGKPIKEYF-ARETSLMIVRQPLELTAHAETFDIKVNVTGGGETGQAGAVRHGITRALIDYDATLKPTLSKAGYVTRDAREVERKKVGLHKARRRKQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_NITWN (30S ribosomal protein S9 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rpsI PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22 Identity = 59/125 (47.20%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 + TG+RK A+ARV ++ G GK ++N R+ Y P+ I+ PLV YDV GGGLSGQA A+ G+++AL + R LKK G LTRDSRVVERKK G KAR++ Q+SKR Sbjct: 35 YATGKRKDAVARVWIKPGAGKILVNAREVDVYF-ARPVLRMMIQQPLVAAARAGQYDVVCTVAGGGLSGQAGAVRHGLSKALTHFEPELRGVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 158
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_HALHL (30S ribosomal protein S9 OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=rpsI PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22 Identity = 56/130 (43.08%), Postives = 77/130 (59.23%), Query Frame = 2 Query: 92 AAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 A Q +GTGRRK + ARV + G G +N R EY G ++ L + +D+ GGG SGQA A+ G+ARAL + ++PL++ G +TRD+R+VERKK GLHKAR+A Q+SKR Sbjct: 2 ANQQYYGTGRRKTSAARVFMTPGNGNITVNGRPLDEYF-GRETGRMIVRQALEQVDAGDKFDIKATVSGGGSSGQAGAVRHGIARALANYDAELKAPLRRAGFITRDARMVERKKIGLHKARRATQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_FLAPJ (30S ribosomal protein S9 OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=rpsI PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22 Identity = 57/122 (46.72%), Postives = 79/122 (64.75%), Query Frame = 2 Query: 116 GRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GRRKCA+ARV + EGTG +N + Y L + ++ P+ T+YDV V +GGG +GQA+A+ + +AR + +V + +R+ LK EGLLTRD R+VERKK G KARK Q+SKR Sbjct: 8 GRRKCAVARVYVSEGTGVITVNKKAFATYFPTATLQYKVLQ-PMSMTENVTNYDVKVNVYGGGSTGQAEAVRMALARVMCEVGEGNRAILKPEGLLTRDPRMVERKKFGQKKARKRFQFSKR 128
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_CUPTR (30S ribosomal protein S9 OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=rpsI PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22 Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK A+ARV ++ G G ++N + KEY L ++ PL + ++D+ V GGG +GQA A+ G+ RAL+ +S L K G +TRD+R VERKK G HKAR+ Q+SKR Sbjct: 7 YGTGRRKSAVARVFIKSGKGDIVVNGKPIKEYF-ARETSLMIVRQPLELTAHAETFDIKVNVTGGGETGQAGAVRHGITRALIDYDATLKSALSKAGYVTRDAREVERKKVGFHKARRRKQFSKR 130 The following BLAST results are available for this feature:
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622924 ID=BQ622924; Name=BQ622924; organism=Citrus sinensis; type=EST; length=670bpback to top |