BQ622927

Overview
NameBQ622927
Unique NameBQ622927
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length603
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622927 vs. ExPASy Swiss-Prot
Match: YSL2_ARATH (Metal-nicotianamine transporter YSL2 OS=Arabidopsis thaliana GN=YSL2 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.066e-34
Identity = 64/107 (59.81%), Postives = 85/107 (79.44%), Query Frame = 3
Query:    3 NCLLLCYVLFGAAIVINLIRDSIRKEWARFIPLPMAMAIPFYLGPYFAIDMCVGSLLLFIWEKIDKAKADAFGPAVASGLICGDGIWSLPSSILALAKVQPPMCMKF 323
            +CL LCY  F  A+  NL RD +  +  ++IPLPMAMA+PF +G  FAIDMC+GSL++++W+K+++ KAD   PAVASGLICGDG+W LPSS+LALAKV+PP+CM F
Sbjct:  554 HCLELCYGFFAFAVAANLARDLLPDKPGKWIPLPMAMAVPFLVGGSFAIDMCIGSLVVYVWKKVNRKKADVMVPAVASGLICGDGLWILPSSLLALAKVRPPICMNF 660          
BLAST of BQ622927 vs. ExPASy Swiss-Prot
Match: YSL6_ARATH (Probable metal-nicotianamine transporter YSL6 OS=Arabidopsis thaliana GN=YSL6 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 5.310e-34
Identity = 61/107 (57.01%), Postives = 88/107 (82.24%), Query Frame = 3
Query:    3 NCLLLCYVLFGAAIVINLIRDSIRKEWARFIPLPMAMAIPFYLGPYFAIDMCVGSLLLFIWEKIDKAKADAFGPAVASGLICGDGIWSLPSSILALAKVQPPMCMKF 323
            +CL LCY  F AA+++NL+RD    + ++FIP+PMAMA+PFY+G YFAIDM VG+++LF+WE+I++  A+ F  AVASGLICGDGIW++PS+IL++ ++ PP+CM F
Sbjct:  564 HCLALCYGFFIAALIVNLLRDITPPKISQFIPIPMAMAVPFYIGAYFAIDMFVGTVILFVWERINRKDAEDFAGAVASGLICGDGIWTIPSAILSILRINPPICMYF 670          
BLAST of BQ622927 vs. ExPASy Swiss-Prot
Match: YSL5_ORYSJ (Probable metal-nicotianamine transporter YSL5 OS=Oryza sativa subsp. japonica GN=YSL5 PE=2 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 5.310e-34
Identity = 60/107 (56.07%), Postives = 86/107 (80.37%), Query Frame = 3
Query:    3 NCLLLCYVLFGAAIVINLIRDSIRKEWARFIPLPMAMAIPFYLGPYFAIDMCVGSLLLFIWEKIDKAKADAFGPAVASGLICGDGIWSLPSSILALAKVQPPMCMKF 323
            +CL +C V F AA++INL++D +    +RFIP+PMAMA+PFY+G YF +DM +G+L+LF W+KID+ +AD +  AVASGLICGDG+WS+PS++L++  V PP+CM F
Sbjct:  555 HCLEICCVFFLAALIINLMKDVVPNHVSRFIPIPMAMAVPFYIGAYFGVDMFIGTLILFAWQKIDRREADDYAVAVASGLICGDGVWSIPSAVLSILGVDPPICMSF 661          
BLAST of BQ622927 vs. ExPASy Swiss-Prot
Match: YSL9_ORYSJ (Probable metal-nicotianamine transporter YSL9 OS=Oryza sativa subsp. japonica GN=YSL9 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 6.936e-34
Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 3
Query:    3 NCLLLCYVLFGAAIVINLIRDSIRKEWARFIPLPMAMAIPFYLGPYFAIDMCVGSLLLFIWEKIDKAKADAFGPAVASGLICGDGIWSLPSSILALAKVQPPMCMKFLS 329
            +CL LCY  FG A+  NL RD    ++ R++PLPMAM +PF +G  FAIDMC+GSL++F W  IDK+KA    PAVASGLICGDG+W  P+S+LALAK+ PPMCM F S
Sbjct:  574 HCLQLCYGFFGFAVAANLTRDLCPPKYGRWVPLPMAMGVPFLVGASFAIDMCIGSLIVFTWHIIDKSKAALMVPAVASGLICGDGLWIFPASLLALAKISPPMCMAFRS 682          
BLAST of BQ622927 vs. ExPASy Swiss-Prot
Match: YS1_MAIZE (Iron-phytosiderophore transporter yellow stripe 1 OS=Zea mays GN=YS1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.545e-33
Identity = 65/107 (60.75%), Postives = 85/107 (79.44%), Query Frame = 3
Query:    3 NCLLLCYVLFGAAIVINLIRDSIRKEWARFIPLPMAMAIPFYLGPYFAIDMCVGSLLLFIWEKIDKAKADAFGPAVASGLICGDGIWSLPSSILALAKVQPPMCMKF 323
            +CL L    F  A V ++ RD + +++ARF+PLPMAMA+PF +G  FAIDMCVGSL +F+WEK+++ +A    PAVASGLICGDGIW+ PSSILALAK++PP+CMKF
Sbjct:  572 HCLALSAGFFAFAFVFSVARDVLPRKYARFVPLPMAMAVPFLVGGSFAIDMCVGSLAVFVWEKVNRKEAVFMVPAVASGLICGDGIWTFPSSILALAKIKPPICMKF 678          
BLAST of BQ622927 vs. ExPASy Swiss-Prot
Match: YSL3_ARATH (Metal-nicotianamine transporter YSL3 OS=Arabidopsis thaliana GN=YSL3 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.636e-33
Identity = 64/108 (59.26%), Postives = 81/108 (75.00%), Query Frame = 3
Query:    3 NCLLLCYVLFGAAIVINLIRDSIRKEWARFIPLPMAMAIPFYLGPYFAIDMCVGSLLLFIWEKIDKAKADAFGPAVASGLICGDGIWSLPSSILALAKVQPPMCMKFL 326
            +CL LCY  F  A+  NL+RD +  +   ++PLPMAMA+PF +G YFAIDMCVGSL++F W   D+ KA    PAVASGLICGDG+W LPSS+LALA V+PP+CM F+
Sbjct:  562 HCLQLCYGFFAFAVAANLVRDRLPDKIGNWVPLPMAMAVPFLVGGYFAIDMCVGSLIVFAWNMRDRVKAGLMVPAVASGLICGDGLWILPSSVLALAGVRPPICMGFM 669          
BLAST of BQ622927 vs. ExPASy Swiss-Prot
Match: YSL16_ORYSJ (Probable metal-nicotianamine transporter YSL16 OS=Oryza sativa subsp. japonica GN=YSL16 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 2.636e-33
Identity = 63/108 (58.33%), Postives = 83/108 (76.85%), Query Frame = 3
Query:    3 NCLLLCYVLFGAAIVINLIRDSIRKEWARFIPLPMAMAIPFYLGPYFAIDMCVGSLLLFIWEKIDKAKADAFGPAVASGLICGDGIWSLPSSILALAKVQPPMCMKFL 326
            +CL LC   F  A++ NL RD + + + R++PLPMAMA+PF +G  FAIDMC GSL++F+W + D  +A    PAVASGLICGDGIW+ PSS+LALAKV+PP+CMKF+
Sbjct:  565 HCLQLCAGFFAFAVLANLARDFLPRRYGRYMPLPMAMAVPFLVGASFAIDMCAGSLVVFLWHRFDGKRAALLVPAVASGLICGDGIWTFPSSLLALAKVKPPICMKFI 672          
BLAST of BQ622927 vs. ExPASy Swiss-Prot
Match: YSL8_ORYSJ (Probable metal-nicotianamine transporter YSL8 OS=Oryza sativa subsp. japonica GN=YSL8 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.806e-32
Identity = 67/122 (54.92%), Postives = 84/122 (68.85%), Query Frame = 3
Query:    6 CLLLCYVLFGAAIVINLIRDSIRKE--WAR-FIPLPMAMAIPFYLGPYFAIDMCVGSLLLFIWEKIDKAKADAFGPAVASGLICGDGIWSLPSSILALAKVQPPMCMKFLSRRTNARVDKFL 362
            CL  C   F  AI I  +++  ++   W + FIP  + MA+PF+LG +F IDMCVGSL+LF+W + D  +A  F PAVASGLICGDGIWSLPSSIL+LA V PPMCM+  S  TN +V  FL
Sbjct:  566 CLRFCLAFFLLAIAICALKEVAKQRGWWIQDFIPSALGMAVPFFLGSFFTIDMCVGSLVLFLWSRSDPVRAHTFAPAVASGLICGDGIWSLPSSILSLANVNPPMCMRVFSTATNDKVQLFL 687          
BLAST of BQ622927 vs. ExPASy Swiss-Prot
Match: YSL4_ARATH (Probable metal-nicotianamine transporter YSL4 OS=Arabidopsis thaliana GN=YSL4 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.467e-31
Identity = 59/107 (55.14%), Postives = 84/107 (78.50%), Query Frame = 3
Query:    3 NCLLLCYVLFGAAIVINLIRDSIRKEWARFIPLPMAMAIPFYLGPYFAIDMCVGSLLLFIWEKIDKAKADAFGPAVASGLICGDGIWSLPSSILALAKVQPPMCMKF 323
            +CL LC   F AA+++NLIRD    + ++ IPLPMAMA PFY+G YFAIDM VG++++ +WE+++K  AD +  AVASGLICGDGIW++PS+IL++ ++ PP+CM F
Sbjct:  561 HCLALCCGFFIAALIVNLIRDMTPPKISKLIPLPMAMAGPFYIGAYFAIDMFVGTVIMLVWERMNKKDADDYSGAVASGLICGDGIWTIPSAILSILRINPPICMYF 667          
BLAST of BQ622927 vs. ExPASy Swiss-Prot
Match: YSL15_ORYSJ (Iron-phytosiderophore transporter YSL15 OS=Oryza sativa subsp. japonica GN=YSL15 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.208e-31
Identity = 61/107 (57.01%), Postives = 81/107 (75.70%), Query Frame = 3
Query:    3 NCLLLCYVLFGAAIVINLIRDSIRKEWARFIPLPMAMAIPFYLGPYFAIDMCVGSLLLFIWEKIDKAKADAFGPAVASGLICGDGIWSLPSSILALAKVQPPMCMKF 323
            +CL L    F  A++ N+ RD++   + + +PLP AMA+PF +G  FAIDMCVGSL+LF W K++K +A    PAVASGL+CGDGIW+ PSSILALAK++PP+CMKF
Sbjct:  562 HCLSLSVGFFAFAVLTNVARDALPARYKKLVPLPTAMAVPFLVGASFAIDMCVGSLVLFAWNKMNKKEAAFMVPAVASGLMCGDGIWTFPSSILALAKIKPPICMKF 668          
The following BLAST results are available for this feature:
BLAST of BQ622927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
YSL2_ARATH4.066e-3459.81Metal-nicotianamine transporter YSL2 OS=Arabidopsi... [more]
YSL6_ARATH5.310e-3457.01Probable metal-nicotianamine transporter YSL6 OS=A... [more]
YSL5_ORYSJ5.310e-3456.07Probable metal-nicotianamine transporter YSL5 OS=O... [more]
YSL9_ORYSJ6.936e-3459.63Probable metal-nicotianamine transporter YSL9 OS=O... [more]
YS1_MAIZE1.545e-3360.75Iron-phytosiderophore transporter yellow stripe 1 ... [more]
YSL3_ARATH2.636e-3359.26Metal-nicotianamine transporter YSL3 OS=Arabidopsi... [more]
YSL16_ORYSJ2.636e-3358.33Probable metal-nicotianamine transporter YSL16 OS=... [more]
YSL8_ORYSJ3.806e-3254.92Probable metal-nicotianamine transporter YSL8 OS=O... [more]
YSL4_ARATH2.467e-3155.14Probable metal-nicotianamine transporter YSL4 OS=A... [more]
YSL15_ORYSJ4.208e-3157.01Iron-phytosiderophore transporter YSL15 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00018 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00018 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622927 ID=BQ622927; Name=BQ622927; organism=Citrus sinensis; type=EST; length=603bp
AGAATTGTCTCTTGCTTTGCTATGTGCTTTTCGGAGCAGCCATTGTGATA
AATCTGATTAGGGATTCAATACGCAAGGAGTGGGCAAGGTTCATTCCTCT
CCCAATGGCAATGGCAATTCCTTTTTACTTGGGGCCGTACTTTGCCATTG
ATATGTGTGTTGGAAGCCTGCTTTTGTTCATCTGGGAAAAGATAGACAAG
GCAAAAGCAGATGCTTTTGGTCCAGCAGTTGCTTCCGGTTTGATTTGTGG
CGATGGAATATGGAGTTTGCCCAGTTCCATACTTGCTCTAGCAAAGGTCC
AGCCGCCCATGTGCATGAAGTTTTTGTCAAGGAGAACCAATGCCAGGGTT
GATAAATTCTTAGGATTTTAATTTTCAGCCCTCGATGAATCCAGTTGAAG
TTCCACCATGCGCTTATCGTTGTTGAAGCATCCTCAACTTGTAAAATACC
GCTTCTTTTTACTTCTTTTCCACTTTTTCCTCGTGTGAAGTAGGATAGCT
TGTTTGTGCTGAAGTATATTATTGTACTGTAAAATCAGGTATAAACTCAT
GCTTTGGTTTGAATCCTGTACTGGCATAGAAAGTGAAAGGAAATGTCCAA
GCT
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