BQ623087

Overview
NameBQ623087
Unique NameBQ623087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8171 contig Csv1_Contig8171:173..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_HUMAN (V-type proton ATPase catalytic subunit A OS=Homo sapiens GN=ATP6V1A PE=1 SV=2)

HSP 1 Score: 397.897 bits (1021), Expect = 2.830e-110
Identity = 192/237 (81.01%), Postives = 217/237 (91.56%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGY+VSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSV+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  AL+ +Y++   +F+ +RTKA+E+LQ E+DL EIVQLVGK +LAE DKITLE AKL+++D+L QN +TPYD+FCPFYK+V M+
Sbjct:  305 IMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGML 541          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_BOVIN (V-type proton ATPase catalytic subunit A OS=Bos taurus GN=ATP6V1A PE=2 SV=2)

HSP 1 Score: 397.897 bits (1021), Expect = 2.830e-110
Identity = 192/237 (81.01%), Postives = 217/237 (91.56%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGY+VSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSV+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  AL+ +Y++   +F+ +RTKA+E+LQ E+DL EIVQLVGK +LAE DKITLE AKL+++D+L QN +TPYD+FCPFYK+V M+
Sbjct:  305 IMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGML 541          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_AEDAL (V-type proton ATPase catalytic subunit A OS=Aedes albopictus GN=VhaA PE=2 SV=1)

HSP 1 Score: 397.897 bits (1021), Expect = 2.830e-110
Identity = 192/238 (80.67%), Postives = 218/238 (91.60%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSV+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPS+NWLISYSKY  AL+ FY++   +F+ +RTK +E+LQ E+DL+EIVQLVGK +LAE DKITLE AKLL++D+L QN+++ YD+FCPFYK+V M+R
Sbjct:  302 IMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFYDKNFQEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSAYDRFCPFYKTVGMLR 539          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_AEDAE (V-type proton ATPase catalytic subunit A OS=Aedes aegypti GN=VhaA PE=2 SV=2)

HSP 1 Score: 397.897 bits (1021), Expect = 2.830e-110
Identity = 192/238 (80.67%), Postives = 218/238 (91.60%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSV+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPS+NWLISYSKY  AL+ FY++   +F+ +RTK +E+LQ E+DL+EIVQLVGK +LAE DKITLE AKLL++D+L QN+++ YD+FCPFYK+V M+R
Sbjct:  302 IMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFYDKNFQEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSAYDRFCPFYKTVGMLR 539          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_PIG (V-type proton ATPase catalytic subunit A OS=Sus scrofa GN=ATP6V1A PE=2 SV=2)

HSP 1 Score: 397.512 bits (1020), Expect = 3.696e-110
Identity = 192/237 (81.01%), Postives = 217/237 (91.56%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGY+VSMMA+STSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSVTIVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  AL+ +Y++   +F+ +RTKA+E+LQ E+DL EIVQLVGK +LAE DKITLE AKL+++D+L QN +TPYD+FCPFYK+V M+
Sbjct:  305 IMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMANSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGML 541          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA1_DROME (V-type proton ATPase catalytic subunit A isoform 1 OS=Drosophila melanogaster GN=Vha68-1 PE=2 SV=2)

HSP 1 Score: 397.512 bits (1020), Expect = 3.696e-110
Identity = 189/238 (79.41%), Postives = 219/238 (92.02%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGYNV+MMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLA+FYERAG+VKCLG PER GSV+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPS+NWLISYSKY  AL+ +Y++  P+F+ +RTK +E+LQ E+DL+EIVQLVGK +LAE DK+TLE AKLL++D+L QN+++PYD+ CPFYK+V M+R
Sbjct:  302 IMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVAMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLATFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDEYYDKNYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKVTLEVAKLLKDDFLQQNSYSPYDRVCPFYKTVGMLR 539          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_TRYCO (V-type proton ATPase catalytic subunit A OS=Trypanosoma congolense PE=2 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 1.405e-109
Identity = 188/238 (78.99%), Postives = 217/238 (91.18%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT LVANTSNMPVAAREASIYTGIT+AEY+RDMG +++MMADSTSRWAEALREISGRLAEMPAD GYPAYL+ARLASFYERAG+V C+GGP+R GSVTIVGAVSPPGGDFSDPVTSATL IVQVFWGL+K+LAQRKHFPSVNWLISYSKY  ALE F+   DPD++ +R+ A E+LQRE++L EIVQLVGKD+L+E DKI LETAK++RE++L QNAFTPYDK+CP YK+ WM+R
Sbjct:  300 IMKRTCLVANTSNMPVAAREASIYTGITLAEYYRDMGKHIAMMADSTSRWAEALREISGRLAEMPADGGYPAYLSARLASFYERAGRVTCIGGPKREGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFWGLEKRLAQRKHFPSVNWLISYSKYLNALEPFFNTLDPDYMRLRSVAAEILQREEELQEIVQLVGKDSLSESDKIILETAKVIREEFLQQNAFTPYDKYCPPYKTCWMLR 537          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_DICDI (V-type proton ATPase catalytic subunit A OS=Dictyostelium discoideum GN=vatA PE=1 SV=2)

HSP 1 Score: 392.889 bits (1008), Expect = 9.104e-109
Identity = 183/238 (76.89%), Postives = 218/238 (91.60%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT LVANTSNMPVAAREASIYTGIT+AEYFRDMG NV+MMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+V C+G P R GSVTIVGAVSPPGGDF+DPVT+ATL IVQVFWGLDKKLAQRKHFPS+NWLIS+SKY  AL++ Y+Q DP+F+ +RT+A+E+LQ E+DL+EIVQLVG+D+L E +KIT+E A+++R+D+L QN F+PYDK CPF+K+VWM++
Sbjct:  306 IMQRTCLVANTSNMPVAAREASIYTGITLAEYFRDMGLNVAMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVSCIGHPTRIGSVTIVGAVSPPGGDFADPVTAATLGIVQVFWGLDKKLAQRKHFPSINWLISFSKYMQALDTHYDQMDPEFVPLRTRAKEILQMEEDLSEIVQLVGQDSLGESEKITIEVARIIRDDFLQQNGFSPYDKCCPFFKTVWMLK 543          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_PLAFA (V-type proton ATPase catalytic subunit A OS=Plasmodium falciparum GN=vapA PE=3 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 3.958e-104
Identity = 179/238 (75.21%), Postives = 207/238 (86.97%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT LVANTSNMPVAAREASIYTGIT+ EYFRDMGYN +MMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAGKVKC+G P R GS+TIVGAVSPPGGDFSDPVT+AT+SIVQ FWGLDKKLAQRKHFPSVNW  S+SKY   LE +++ FD DF+++R K  ++LQ+E DLN+IVQLVGKD+L+E  K+ +E AK++RED+L QNAF+ YD  CP  K+V MMR
Sbjct:  299 IMQRTCLVANTSNMPVAAREASIYTGITLCEYFRDMGYNATMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGKVKCIGSPSRIGSITIVGAVSPPGGDFSDPVTTATMSIVQAFWGLDKKLAQRKHFPSVNWSTSFSKYVRQLEQYFDNFDQDFLSLRQKISDILQQESDLNDIVQLVGKDSLSEDQKVVMEVAKIIREDFLQQNAFSDYDYMCPLQKTVGMMR 536          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_PLAF7 (V-type proton ATPase catalytic subunit A OS=Plasmodium falciparum (isolate 3D7) GN=vapA PE=3 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 3.958e-104
Identity = 179/238 (75.21%), Postives = 207/238 (86.97%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT LVANTSNMPVAAREASIYTGIT+ EYFRDMGYN +MMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAGKVKC+G P R GS+TIVGAVSPPGGDFSDPVT+AT+SIVQ FWGLDKKLAQRKHFPSVNW  S+SKY   LE +++ FD DF+++R K  ++LQ+E DLN+IVQLVGKD+L+E  K+ +E AK++RED+L QNAF+ YD  CP  K+V MMR
Sbjct:  299 IMQRTCLVANTSNMPVAAREASIYTGITLCEYFRDMGYNATMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGKVKCIGSPSRIGSITIVGAVSPPGGDFSDPVTTATMSIVQAFWGLDKKLAQRKHFPSVNWSTSFSKYVRQLEQYFDNFDQDFLSLRQKISDILQQESDLNDIVQLVGKDSLSEDQKVVMEVAKIIREDFLQQNAFSDYDYMCPLQKTVGMMR 536          
The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATA_HUMAN2.830e-11081.01V-type proton ATPase catalytic subunit A OS=Homo s... [more]
VATA_BOVIN2.830e-11081.01V-type proton ATPase catalytic subunit A OS=Bos ta... [more]
VATA_AEDAL2.830e-11080.67V-type proton ATPase catalytic subunit A OS=Aedes ... [more]
VATA_AEDAE2.830e-11080.67V-type proton ATPase catalytic subunit A OS=Aedes ... [more]
VATA_PIG3.696e-11081.01V-type proton ATPase catalytic subunit A OS=Sus sc... [more]
VATA1_DROME3.696e-11079.41V-type proton ATPase catalytic subunit A isoform 1... [more]
VATA_TRYCO1.405e-10978.99V-type proton ATPase catalytic subunit A OS=Trypan... [more]
VATA_DICDI9.104e-10976.89V-type proton ATPase catalytic subunit A OS=Dictyo... [more]
VATA_PLAFA3.958e-10475.21V-type proton ATPase catalytic subunit A OS=Plasmo... [more]
VATA_PLAF73.958e-10475.21V-type proton ATPase catalytic subunit A OS=Plasmo... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00178 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bp
TGTCATGAAGCGTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGG
CTGCTCGTGAGGCTTCGATTTATACAGGAATCACCATAGCTGAATATTTC
AGAGATATGGGGTACAATGTTAGCATGATGGCAGATTCAACTTCTCGTTG
GGCAGAAGCGTTGCGTGAAATTTCAGGACGGCTGGCAGAAATGCCTGCAG
ATAGTGGATATCCTGCTTACCTGGCTGCACGTTTGGCCTCATTTTATGAA
CGTGCTGGGAAAGTTAAATGTCTTGGTGGACCAGAACGTACTGGTAGTGT
CACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTG
TAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAG
AAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTTA
CTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCGG
ATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGAT
GACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAGG
AGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTTG
CTCAAAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTCT
GTTTGGATGATGCGTACAT
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