BQ623087

Overview
NameBQ623087
Unique NameBQ623087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8171 contig Csv1_Contig8171:173..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_THEON (V-type ATP synthase alpha chain OS=Thermococcus onnurineus (strain NA1) GN=atpA PE=3 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.729e-83
Identity = 150/239 (62.76%), Postives = 192/239 (80.33%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYPAYLA+++A FYERAG+V  LG  ER GSV+++GAVSPPGGDFS+PV   TL +V+VFW LD  LA+R+HFP++NWL SYS Y  +++  +++  DP++  +R +A E+LQ+E +L EIV++VG DAL + +K  L  A++LREDYL Q+AF   D +CP  K V MMR
Sbjct:  284 LMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKIAEFYERAGRVITLGSDERIGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLRSYSLYIDSIQDWWHKNVDPEWRAMRDRAMELLQKEAELQEIVRIVGPDALPDREKAVLIVARMLREDYLQQDAFDEVDTYCPPKKQVTMMR 522          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_PYRHO (V-type ATP synthase alpha chain OS=Pyrococcus horikoshii GN=atpA PE=1 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.258e-83
Identity = 151/239 (63.18%), Postives = 190/239 (79.50%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYPAYLA++LA FYERAG+V  LG   R GSV+++GAVSPPGGDFS+PV   TL +V+VFW LD  LA+R+HFP++NWL SYS Y  A++  +++  DP++  +R KA  +LQ+E +L EIV++VG DAL E ++  L  A++LREDYL Q+AF   D +CP  K V MMR
Sbjct:  663 LMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNIDPEWKAMRDKAMALLQKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMR 901          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METBU (V-type ATP synthase alpha chain OS=Methanococcoides burtonii (strain DSM 6242) GN=atpA PE=3 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.258e-83
Identity = 150/240 (62.50%), Postives = 190/240 (79.17%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRT 718
            +M+RT L+ANTSNMPVAAREAS+YTGITIAEY+RDMGY+VS+MADS+SRWAEA+REIS RL EMP + GYPAYL+ARL+ FYERAG V  L G +  GS+T++GAVSPPGGDFS+PVT  TL IV+VFW LD KL+QR+HFPS+NWL SYS Y+  L  +Y E    D+  +R  A ++LQ+E +L EIVQLVG DAL E  ++TLE A+++RE +L QNAF P D +CPF K   ++++
Sbjct:  281 LMERTVLIANTSNMPVAAREASVYTGITIAEYYRDMGYDVSLMADSSSRWAEAMREISSRLEEMPGEEGYPAYLSARLSEFYERAGAVNSLAGLD--GSITVIGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPSINWLTSYSLYTQGLADWYSENVGADWTQLRDDAMDLLQQESELQEIVQLVGSDALPEDQQLTLEVARMVREYFLQQNAFHPVDTYCPFDKQYKLLKS 518          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_STRSV (V-type ATP synthase alpha chain OS=Streptococcus sanguinis (strain SK36) GN=atpA PE=3 SV=2)

HSP 1 Score: 306.605 bits (784), Expect = 8.581e-83
Identity = 149/238 (62.61%), Postives = 188/238 (78.99%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R+A +YERAG+VK LG   R GS+T +GAVSPPGGD S+PVT  TL IV+VFWGLD +LAQR+HFP++NWL SYS Y   + ++ +Q +   +    TKA  +LQ+E +L EIV+LVG D+L+E D++T+  AK++REDYL QNAF   D +  F K V ++
Sbjct:  286 IMQRTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRIAEYYERAGRVKTLGSTAREGSITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAQLAQRRHFPAINWLSSYSLYLDEVGAYIDQHEKIAWAEKVTKAMNILQKESELQEIVRLVGLDSLSEKDRLTMNAAKMIREDYLQQNAFDDVDTYTSFKKQVALL 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_STRGC (V-type ATP synthase alpha chain OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=atpA PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 8.581e-83
Identity = 149/238 (62.61%), Postives = 188/238 (78.99%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R+A +YERAG+VK LG   R GS+T +GAVSPPGGD S+PVT  TL IV+VFWGLD +LAQR+HFP++NWL SYS Y   + ++ +Q +   +    TKA  +LQ+E +L EIV+LVG D+L+E D++T+  AK++REDYL QNAF   D +  F K V ++
Sbjct:  286 IMQRTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRIAEYYERAGRVKTLGSTAREGSITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAQLAQRRHFPAINWLSSYSLYLDEVGAYIDQHEKIAWAEKVTKAMNILQKESELQEIVRLVGLDSLSEKDRLTMNAAKMIREDYLQQNAFDDVDTYTSFKKQVALL 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA2_METHJ (V-type ATP synthase alpha chain 2 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpA2 PE=3 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.121e-82
Identity = 147/239 (61.51%), Postives = 186/239 (77.82%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +++RT ++ANTSNMPVAAREASIYTGITIAEY+RDMG +V+++ADSTSRW EALRE+SGRL EMP + GYPAYLA RLA+FYERAG+V C G  E+TGSVTI+GAVSPPGGDFS+P+T  TL I   FW LD  LA R+H+PSVNW+ SYS Y   +E  F E+   D+   R +A  +LQ+E +L EIVQLVG DAL + +K+ LE AK++RED+L Q+A++  D FCP  K  WM++
Sbjct:  280 LIERTIMIANTSNMPVAAREASIYTGITIAEYYRDMGMDVALLADSTSRWGEALREVSGRLEEMPGEEGYPAYLATRLAAFYERAGRVICAGSEEKTGSVTIIGAVSPPGGDFSEPITQNTLRIAGTFWALDANLAYRRHYPSVNWIRSYSLYLEDVEDWFSEKVARDWYQFRGRAMYILQKEVELQEIVQLVGPDALPDKEKVVLEIAKIIREDFLQQSAYSDDDSFCPLEKQYWMLK 518          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_THESM (V-type ATP synthase alpha chain OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=atpA PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.464e-82
Identity = 149/239 (62.34%), Postives = 190/239 (79.50%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGYNV++MADSTSRWAEALREISGRL EMP + GYPAYLA+++A FYERAG+V+ LG  +R GSV+++GAVSPPGGD SDPV   TL +V+VFW LD  LA+R+HFP++NWL SYS Y  +++ +++   DP++  +R +A  +LQ+E +L EIV++VG DAL E +K  L  A++LREDYL Q+AF   D +C   K V MMR
Sbjct:  284 LMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYNVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKVAEFYERAGRVRTLGSDDRIGSVSVIGAVSPPGGDLSDPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDSIKDWWQNNVDPEWKAMRDEAMALLQKESELEEIVRIVGPDALPEREKAILLVARMLREDYLQQDAFHEVDTYCLPKKQVTMMR 522          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METB6 (V-type ATP synthase alpha chain OS=Methanoregula boonei (strain 6A8) GN=atpA PE=3 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.497e-82
Identity = 152/239 (63.60%), Postives = 190/239 (79.50%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT L+ANTSNMPVAAREAS+YTGITIAEYFRDMGY+VS+MADSTSRWAEA+REIS RL EMP + GYPAYLAARL+ FYERAG V+ L    ++GSV+++GAVSPPGGDFS+PVT  TL IV+VFW LD KL+QR+HFP++NWL SYS Y  AL  +Y++   PD+  +R+ A  VLQ+E +L EIVQLVG DAL E ++IT+E A+++RE +L QNA+   D FC   K   MM+
Sbjct:  290 LMERTVLIANTSNMPVAAREASVYTGITIAEYFRDMGYDVSLMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLSEFYERAGLVETLN--HQSGSVSVIGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYLDALHDWYDKNVSPDWNKLRSWAMGVLQKEAELQEIVQLVGSDALPETEQITIEVARMIREIFLQQNAYDAVDTFCDMQKQYDMMK 526          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA1_METHJ (V-type ATP synthase alpha chain 1 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpA1 PE=3 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.497e-82
Identity = 151/233 (64.81%), Postives = 185/233 (79.40%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYK 697
            +M+RT L+ANTSNMPVAAREAS+YTGITIAEYFRDMGY+VS+MADSTSRWAEA+REIS RL EMP + GYPAYLAARL+ FYERAG+V  L   +  GSVT++GAVSPPGGDFS+PVT  TL IV+ FW LD KL+QR+HFP++NWL SYS Y   L  +Y E   P++  +RT A EVLQ+E +L EIVQLVG DAL + +++T+E A++LRE +L QNAF P D +C   K
Sbjct:  284 LMERTVLIANTSNMPVAAREASVYTGITIAEYFRDMGYDVSLMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLSEFYERAGRVNTLN--KDFGSVTVIGAVSPPGGDFSEPVTQNTLRIVKCFWALDAKLSQRRHFPAINWLNSYSLYLDTLSQYYDENVSPEWNPLRTWAMEVLQKEAELQEIVQLVGSDALPDEEQVTIEVARMLREIFLQQNAFDPVDTYCDMTK 514          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METMJ (V-type ATP synthase alpha chain OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=atpA PE=3 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.261e-82
Identity = 151/239 (63.18%), Postives = 189/239 (79.08%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT L+ANTSNMPVAAREAS+YTGITIAEYFRDMGY+VS+MADSTSRWAEA+REIS RL EMP + GYPAYLAARL+ FYERAG+V  L G    GSV+++GAVSPPGGDFS+PVT  TL IV+VFW LD KL+QR+HFP++NWL SYS Y  AL  +Y+ +  P++  +R  A  VLQ+E +L EIVQLVG DAL + +++T+E A+++RE +L QNA+   D FCP  K   MM+
Sbjct:  287 LMERTVLIANTSNMPVAAREASVYTGITIAEYFRDMGYDVSLMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLSEFYERAGRVISLNG--EGGSVSVIGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYLDALNEWYDKEVSPEWNPLRAWAMGVLQKEAELQEIVQLVGSDALPDEEQVTIEVARMIREIFLQQNAYDAVDTFCPMSKQYDMMK 523          
The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATA_THEON1.729e-8362.76V-type ATP synthase alpha chain OS=Thermococcus on... [more]
VATA_PYRHO2.258e-8363.18V-type ATP synthase alpha chain OS=Pyrococcus hori... [more]
VATA_METBU2.258e-8362.50V-type ATP synthase alpha chain OS=Methanococcoide... [more]
VATA_STRSV8.581e-8362.61V-type ATP synthase alpha chain OS=Streptococcus s... [more]
VATA_STRGC8.581e-8362.61V-type ATP synthase alpha chain OS=Streptococcus g... [more]
VATA2_METHJ1.121e-8261.51V-type ATP synthase alpha chain 2 OS=Methanospiril... [more]
VATA_THESM1.464e-8262.34V-type ATP synthase alpha chain OS=Thermococcus si... [more]
VATA_METB62.497e-8263.60V-type ATP synthase alpha chain OS=Methanoregula b... [more]
VATA1_METHJ2.497e-8264.81V-type ATP synthase alpha chain 1 OS=Methanospiril... [more]
VATA_METMJ3.261e-8263.18V-type ATP synthase alpha chain OS=Methanoculleus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00178 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bp
TGTCATGAAGCGTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGG
CTGCTCGTGAGGCTTCGATTTATACAGGAATCACCATAGCTGAATATTTC
AGAGATATGGGGTACAATGTTAGCATGATGGCAGATTCAACTTCTCGTTG
GGCAGAAGCGTTGCGTGAAATTTCAGGACGGCTGGCAGAAATGCCTGCAG
ATAGTGGATATCCTGCTTACCTGGCTGCACGTTTGGCCTCATTTTATGAA
CGTGCTGGGAAAGTTAAATGTCTTGGTGGACCAGAACGTACTGGTAGTGT
CACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTG
TAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAG
AAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTTA
CTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCGG
ATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGAT
GACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAGG
AGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTTG
CTCAAAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTCT
GTTTGGATGATGCGTACAT
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