BQ623087

Overview
NameBQ623087
Unique NameBQ623087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8171 contig Csv1_Contig8171:173..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CLOPS (V-type ATP synthase alpha chain OS=Clostridium perfringens (strain SM101 / Type A) GN=atpA PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.258e-82
Identity = 157/241 (65.15%), Postives = 185/241 (76.76%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFD----PDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +MKRT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+VS+MADSTSRWAEALRE+SGRL EMP D GYPAYL +RLA +YERAGKV  LG   R G+VT +GAVSPPGGD S+PVT +TL IV+VFWGLD +LA ++HFPS+NWL SYS Y   LE   E  D     D+  +RT+A  +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF   D +    K   M+
Sbjct:  285 LMKRTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVSIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRLADYYERAGKVVALGKDGREGAVTAIGAVSPPGGDISEPVTQSTLRIVKVFWGLDAQLAYKRHFPSINWLTSYSLY---LEKMGEWMDAHVADDWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKML 522          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CLOPE (V-type ATP synthase alpha chain OS=Clostridium perfringens GN=atpA PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.258e-82
Identity = 157/241 (65.15%), Postives = 185/241 (76.76%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFD----PDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +MKRT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+VS+MADSTSRWAEALRE+SGRL EMP D GYPAYL +RLA +YERAGKV  LG   R G+VT +GAVSPPGGD S+PVT +TL IV+VFWGLD +LA ++HFPS+NWL SYS Y   LE   E  D     D+  +RT+A  +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF   D +    K   M+
Sbjct:  285 LMKRTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVSIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRLADYYERAGKVVALGKDGREGAVTAIGAVSPPGGDISEPVTQSTLRIVKVFWGLDAQLAYKRHFPSINWLTSYSLY---LEKMGEWMDAHVADDWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKML 522          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CLOP1 (V-type ATP synthase alpha chain OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=atpA PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.258e-82
Identity = 157/241 (65.15%), Postives = 185/241 (76.76%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFD----PDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +MKRT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+VS+MADSTSRWAEALRE+SGRL EMP D GYPAYL +RLA +YERAGKV  LG   R G+VT +GAVSPPGGD S+PVT +TL IV+VFWGLD +LA ++HFPS+NWL SYS Y   LE   E  D     D+  +RT+A  +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF   D +    K   M+
Sbjct:  285 LMKRTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVSIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRLADYYERAGKVVALGKDGREGAVTAIGAVSPPGGDISEPVTQSTLRIVKVFWGLDAQLAYKRHFPSINWLTSYSLY---LEKMGEWMDAHVADDWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKML 522          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_THESI (V-type ATP synthase alpha chain OS=Thermococcus sp. (strain KI) GN=atpA PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.562e-82
Identity = 148/239 (61.92%), Postives = 188/239 (78.66%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRD GY+V++MADSTSRWAEALREISGRL EMP + GYPAYLA+++A FYERAG+V  LG  ER GSV+++GAVSPPGGDFS+PV   TL +V+VFW LD  LA+R+HFP++NWL SYS Y  A++  +++  DP++  +R  A  +LQ+E +L EIV++VG DAL + +K  L   ++LREDYL Q+AF   D +CP  K V MMR
Sbjct:  284 LMERTVLIANTSNMPVAAREASIYTGITIAEYFRDQGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKIAEFYERAGRVITLGSDERVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLRSYSLYVDAIQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVGPDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMR 522          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_PYRKO (V-type ATP synthase alpha chain OS=Pyrococcus kodakaraensis GN=atpA PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.562e-82
Identity = 148/239 (61.92%), Postives = 188/239 (78.66%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRD GY+V++MADSTSRWAEALREISGRL EMP + GYPAYLA+++A FYERAG+V  LG  ER GSV+++GAVSPPGGDFS+PV   TL +V+VFW LD  LA+R+HFP++NWL SYS Y  A++  +++  DP++  +R  A  +LQ+E +L EIV++VG DAL + +K  L   ++LREDYL Q+AF   D +CP  K V MMR
Sbjct:  284 LMERTVLIANTSNMPVAAREASIYTGITIAEYFRDQGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKIAEFYERAGRVITLGSDERVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLRSYSLYIDAIQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVGPDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMR 522          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METAC (V-type ATP synthase alpha chain OS=Methanosarcina acetivorans GN=atpA PE=3 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 7.264e-82
Identity = 152/239 (63.60%), Postives = 185/239 (77.41%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT LVANTSNMPVAAREAS+YTG+T+AEYFRDMGYNVS+MADSTSRWAEA+REIS RL EMP + GYPAYL+ARLA FYERAG  + L G +  GS+T +GAVSPPGGDFS+PVT  TL IV+VFW LD KL+QR+HFP++NWL SYS Y   L   F E   PD++ +R KA ++LQ E +L EIVQLVG DAL E  ++ LE  +++RE YL QNAF P D + PF K   +M+
Sbjct:  281 LMERTILVANTSNMPVAAREASVYTGMTLAEYFRDMGYNVSLMADSTSRWAEAMREISSRLEEMPGEEGYPAYLSARLAEFYERAGVAETLCGEK--GSITAIGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYKEDLNDWFTENVAPDYVAMREKAMDMLQTESELQEIVQLVGSDALPEEQQLLLEITRMIREIYLQQNAFHPIDTYSPFAKQYKIMQ 517          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_STRPD (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=atpA PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 9.487e-82
Identity = 149/238 (62.61%), Postives = 187/238 (78.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R+A +YERAG+V+ LG  ER G++T +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + + + ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+
Sbjct:  286 IMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLQEMPGDEGYPAYLGSRIAEYYERAGRVRTLGSQEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQESNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAML 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_STRPC (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=atpA PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 9.487e-82
Identity = 149/238 (62.61%), Postives = 187/238 (78.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R+A +YERAG+V+ LG  ER G++T +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + + + ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+
Sbjct:  286 IMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLQEMPGDEGYPAYLGSRIAEYYERAGRVRTLGSQEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQESNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAML 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_STRPB (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=atpA PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 9.487e-82
Identity = 149/238 (62.61%), Postives = 187/238 (78.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R+A +YERAG+V+ LG  ER G++T +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + + + ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+
Sbjct:  286 IMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLQEMPGDEGYPAYLGSRIAEYYERAGRVRTLGSQEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQESNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAML 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METST (V-type ATP synthase alpha chain OS=Methanosphaera stadtmanae (strain DSM 3091) GN=atpA PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 9.487e-82
Identity = 148/240 (61.67%), Postives = 187/240 (77.92%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRT 718
            +M RT L+ANTSNMPVAAREA +YTGITIAEYFRDMGY+V++MADSTSRWAEA+RE+SGRL EMP + GYPAYLA+RLA FYERAG+V  +G  +   SVT+VGAVSPPGGD S+PVT  TL I +VFW LD  LA R+HFPS+NWL SYS Y  ++ +++  Q   D+ ++R  A  +LQ+E +LNEIVQLVG DAL + D++TLE+A++LRED+L QNAF   D +C   K   M++T
Sbjct:  285 LMDRTVLIANTSNMPVAAREACVYTGITIAEYFRDMGYDVALMADSTSRWAEAMRELSGRLEEMPGEEGYPAYLASRLAQFYERAGRVTTIGSHKAEASVTVVGAVSPPGGDLSEPVTQNTLRIAKVFWALDASLADRRHFPSINWLNSYSLYVDSITNWWNSQIGSDWRDLRNTAMALLQKESELNEIVQLVGPDALPQKDRVTLESARMLREDFLQQNAFDDTDTYCSPSKQYNMLKT 524          
The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATA_CLOPS4.258e-8265.15V-type ATP synthase alpha chain OS=Clostridium per... [more]
VATA_CLOPE4.258e-8265.15V-type ATP synthase alpha chain OS=Clostridium per... [more]
VATA_CLOP14.258e-8265.15V-type ATP synthase alpha chain OS=Clostridium per... [more]
VATA_THESI5.562e-8261.92V-type ATP synthase alpha chain OS=Thermococcus sp... [more]
VATA_PYRKO5.562e-8261.92V-type ATP synthase alpha chain OS=Pyrococcus koda... [more]
VATA_METAC7.264e-8263.60V-type ATP synthase alpha chain OS=Methanosarcina ... [more]
VATA_STRPD9.487e-8262.61V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPC9.487e-8262.61V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPB9.487e-8262.61V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_METST9.487e-8261.67V-type ATP synthase alpha chain OS=Methanosphaera ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00178 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bp
TGTCATGAAGCGTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGG
CTGCTCGTGAGGCTTCGATTTATACAGGAATCACCATAGCTGAATATTTC
AGAGATATGGGGTACAATGTTAGCATGATGGCAGATTCAACTTCTCGTTG
GGCAGAAGCGTTGCGTGAAATTTCAGGACGGCTGGCAGAAATGCCTGCAG
ATAGTGGATATCCTGCTTACCTGGCTGCACGTTTGGCCTCATTTTATGAA
CGTGCTGGGAAAGTTAAATGTCTTGGTGGACCAGAACGTACTGGTAGTGT
CACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTG
TAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAG
AAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTTA
CTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCGG
ATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGAT
GACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAGG
AGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTTG
CTCAAAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTCT
GTTTGGATGATGCGTACAT
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