BQ623087

Overview
NameBQ623087
Unique NameBQ623087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8171 contig Csv1_Contig8171:173..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA1_CLOTE (V-type ATP synthase alpha chain 1 OS=Clostridium tetani GN=atpA1 PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 9.487e-82
Identity = 151/239 (63.18%), Postives = 183/239 (76.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT L+ANTSNMPVAAREASIYTGITI EYFRDMGY++++MADSTSRWAEALRE+SGRL EMP + GYPAYL +RLA FYERAG V CLG   R G++T +GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y   +  +  E    D++ +R KA  +LQ E +L EI +LVG DAL+E D++ LE AK LREDYL QNAF   D + P  K   M++
Sbjct:  286 LMKRTVLIANTSNMPVAAREASIYTGITIGEYFRDMGYSIALMADSTSRWAEALREMSGRLEEMPGEEGYPAYLGSRLAEFYERAGNVICLGQDGREGALTAIGAVSPPGGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLDKVGPWMNENVAEDWVELRQKAMALLQEEANLQEIARLVGIDALSEEDRLKLEVAKSLREDYLQQNAFHDVDTYAPLNKQYRMLK 524          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_STRP3 (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M3 GN=atpA PE=3 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.239e-81
Identity = 148/238 (62.18%), Postives = 187/238 (78.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R+A +YERAG+V+ LG  ER G++T +GAVSPPGGD S+PVT  TL I++VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + + + ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+
Sbjct:  286 IMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLQEMPGDEGYPAYLGSRIAEYYERAGRVRTLGSQEREGTITAIGAVSPPGGDISEPVTQNTLRIIKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQESNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAML 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_META3 (V-type ATP synthase alpha chain OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=atpA PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.239e-81
Identity = 149/240 (62.08%), Postives = 187/240 (77.92%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRT 718
            +M RT L+ANTSNMPVAAREAS+YTGITIAEYFRDMGY V + ADSTSRWAEA+REISGRL EMP + GYPAYL++RLA FYERAG+V C+G  E+ G V IVGAVSPPGGDFS+PVTS TL IV+VFW LD  LA+R+HFP++NWL SYS Y   +E ++ E    D+  IR +A  +LQ+E +L EIVQLVG DAL + +++ LE +++LRED+L Q+AF+  D +C   K   M++T
Sbjct:  286 LMDRTVLIANTSNMPVAAREASVYTGITIAEYFRDMGYGVLLTADSTSRWAEAMREISGRLEEMPGEEGYPAYLSSRLAQFYERAGRVACMGHDEKQGFVCIVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLQSYSLYLDDIEDWWKENTAEDWREIRDEAMNLLQKEAELQEIVQLVGPDALPDKERVILEVSRMLREDFLQQDAFSDIDSYCSPMKQYTMLKT 525          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CLOBM (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=atpA PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.239e-81
Identity = 152/239 (63.60%), Postives = 183/239 (76.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT L+ANTSNMPVAAREASIYTGITI EYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R A FYERAGKV  LG   R G++T++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y   +  +  E    D+  +RT+A  +LQ E +L EIV+LVG DAL+E D++ LE AK LREDYL QNAF   D +    K   M++
Sbjct:  286 LMKRTVLIANTSNMPVAAREASIYTGITIGEYFRDMGYSVALMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRAADFYERAGKVLSLGSEGREGALTVIGAVSPPGGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLEKISPWMDENVASDWTALRTRAMSLLQEEANLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLEKQYKMLK 524          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CLOBL (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=atpA PE=3 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.239e-81
Identity = 152/239 (63.60%), Postives = 183/239 (76.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT L+ANTSNMPVAAREASIYTGITI EYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R A FYERAGKV  LG   R G++T++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y   +  +  E    D+  +RT+A  +LQ E +L EIV+LVG DAL+E D++ LE AK LREDYL QNAF   D +    K   M++
Sbjct:  284 LMKRTVLIANTSNMPVAAREASIYTGITIGEYFRDMGYSVALMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRAADFYERAGKVLSLGSEGREGALTVIGAVSPPGGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLEKISPWMDENVASDWTALRTRAMSLLQEEANLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLEKQYKMLK 522          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CLOBK (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Okra / Type B1) GN=atpA PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.239e-81
Identity = 152/239 (63.60%), Postives = 183/239 (76.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT L+ANTSNMPVAAREASIYTGITI EYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R A FYERAGKV  LG   R G++T++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y   +  +  E    D+  +RT+A  +LQ E +L EIV+LVG DAL+E D++ LE AK LREDYL QNAF   D +    K   M++
Sbjct:  286 LMKRTVLIANTSNMPVAAREASIYTGITIGEYFRDMGYSVALMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRAADFYERAGKVLSLGSEGREGALTVIGAVSPPGGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLEKISPWMDENVASDWTALRTRAMSLLQEEANLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLEKQYKMLK 524          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_STRPM (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M28 GN=atpA PE=3 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.618e-81
Identity = 149/238 (62.61%), Postives = 186/238 (78.15%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R+A +YERAG+V+ LG  ER G++T +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + +   ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+
Sbjct:  286 IMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLQEMPGDEGYPAYLGSRIAEYYERAGRVRTLGSQEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAML 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_STRPI (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=atpA PE=3 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.618e-81
Identity = 148/238 (62.18%), Postives = 187/238 (78.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFD-PDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M+RT L+ANTSNMPVAAREASIYTGIT+AEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R+A +YERAG+ + LG PER G++T +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y  ++ ++ +  +  D+ +  T+A   LQRE  L EIV+LVG D+L+E +++T+E AK +REDYL QNAF   D F  F K   M+
Sbjct:  286 IMQRTVLIANTSNMPVAAREASIYTGITMAEYFRDMGYSVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRIAEYYERAGRSQALGLPEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDDKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSENERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAML 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_STRPG (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=atpA PE=3 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.618e-81
Identity = 149/238 (62.61%), Postives = 186/238 (78.15%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R+A +YERAG+V+ LG  ER G++T +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + +   ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+
Sbjct:  286 IMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLQEMPGDEGYPAYLGSRIAEYYERAGRVRTLGSQEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAML 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_STRPF (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=atpA PE=3 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.618e-81
Identity = 149/238 (62.61%), Postives = 186/238 (78.15%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R+A +YERAG+V+ LG  ER G++T +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + +   ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+
Sbjct:  286 IMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLQEMPGDEGYPAYLGSRIAEYYERAGRVRTLGSQEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAML 523          
The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATA1_CLOTE9.487e-8263.18V-type ATP synthase alpha chain 1 OS=Clostridium t... [more]
VATA_STRP31.239e-8162.18V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_META31.239e-8162.08V-type ATP synthase alpha chain OS=Methanococcus a... [more]
VATA_CLOBM1.239e-8163.60V-type ATP synthase alpha chain OS=Clostridium bot... [more]
VATA_CLOBL1.239e-8163.60V-type ATP synthase alpha chain OS=Clostridium bot... [more]
VATA_CLOBK1.239e-8163.60V-type ATP synthase alpha chain OS=Clostridium bot... [more]
VATA_STRPM1.618e-8162.61V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPI1.618e-8162.18V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPG1.618e-8162.61V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPF1.618e-8162.61V-type ATP synthase alpha chain OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00178 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bp
TGTCATGAAGCGTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGG
CTGCTCGTGAGGCTTCGATTTATACAGGAATCACCATAGCTGAATATTTC
AGAGATATGGGGTACAATGTTAGCATGATGGCAGATTCAACTTCTCGTTG
GGCAGAAGCGTTGCGTGAAATTTCAGGACGGCTGGCAGAAATGCCTGCAG
ATAGTGGATATCCTGCTTACCTGGCTGCACGTTTGGCCTCATTTTATGAA
CGTGCTGGGAAAGTTAAATGTCTTGGTGGACCAGAACGTACTGGTAGTGT
CACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTG
TAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAG
AAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTTA
CTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCGG
ATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGAT
GACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAGG
AGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTTG
CTCAAAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTCT
GTTTGGATGATGCGTACAT
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