BQ623088

Overview
NameBQ623088
Unique NameBQ623088
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: ATKB_BACC7 (Potassium-transporting ATPase B chain OS=Bacillus cereus (strain AH187) GN=kdpB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.046e-13
Identity = 62/208 (29.81%), Postives = 111/208 (53.37%), Query Frame = 1
Query:   13 PIGRAVVDHSIGKDLPSVSIDRF-----EYFPGRGLTATVNGIESGTEGGKELKASLGSV-DFITSLCKSEDESRKIKEAVNASS---YGRGFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASA 606
            P GR+V+++   K   S+S +R      E+ P +  T  ++G++   +G K  K ++GSV +++ S      +   I + VN  +      G     ++VN ++  LI+L+D  +PG+ +   +L+    ++ +M TGD+  +A  +A   G++E     KPEDK+  +K+  +D G  + M G+G NDAPALA A VG+ +    +A
Sbjct:  364 PEGRSVIEYVQAK---SISYNRELAEQGEFVPFKAETR-MSGVDL-QDGTKVRKGAVGSVIEWVQS------QGGTIPKDVNQKADFISKEGGTPLVVAVNNRIYGLIYLKDTVKPGMRERFEQLRQMG-IKTVMCTGDNPLTAATIAKEAGVDEFVAECKPEDKIAVIKA-EQDKGKLVAMTGDGTNDAPALAQADVGLAMNSGTTA 558          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: ATKB_BACC2 (Potassium-transporting ATPase B chain OS=Bacillus cereus (strain G9842) GN=kdpB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.046e-13
Identity = 61/207 (29.47%), Postives = 110/207 (53.14%), Query Frame = 1
Query:   13 PIGRAVVDHSIGKDLPSVSIDRF-----EYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNASS---YGRGFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASA 606
            P GR+V+++  GK   S+S +R      E+ P +  T  ++G++   +G K  K ++G+V     +   E +   I + VN  +      G     ++V+ ++  LI+L+D  +PG+ +   +L+    ++ +M TGD+  +A  +A   G++E     KPEDK+  +K+  +D G  + M G+G NDAPALA A VG+ +    +A
Sbjct:  364 PEGRSVIEYVQGK---SISYNRELAEQGEFVPFKAETR-MSGVDL-QDGTKVRKGAVGAV-----IEWVESQGGTIPKDVNQKADLISKEGGTPLVVAVDNRIYGLIYLKDTVKPGMRERFEQLRQMG-IKTVMCTGDNPLTAATIAKEAGVDEFVAECKPEDKIAVIKA-EQDKGKLVAMTGDGTNDAPALAQADVGLAMNSGTTA 558          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: ATKB_BACCN (Potassium-transporting ATPase B chain OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=kdpB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.013e-13
Identity = 60/200 (30.00%), Postives = 101/200 (50.50%), Query Frame = 1
Query:   13 PIGRAVVDHSIGKDLP-SVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSV-DFITSLCKSEDESRKIKEAVNASSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASA 606
            P GR+V+D+   K    +VS +    F        ++G++  + G K  K ++G+V D++ S           K  + A   G     AA   N    LI+L+D  +PG+ +   +L+    ++ MM TGD+  +A  +A   G++E     KPEDK+  +K+  +++G  + M G+G NDAPALA A VG+ +    +A
Sbjct:  364 PEGRSVMDYVQSKGFSYNVSKEEIGEFVPFKAETRMSGMDLKS-GEKVRKGAVGAVIDWVQSQRGKIPTDLHQKADLIAKEGGTPLAVAA--GNRIFGLIYLKDTVKPGMRERFEQLRQMG-IKTMMCTGDNPLTAATIAKEAGVDEFVAECKPEDKIAVIKA-EQELGKLVAMTGDGTNDAPALAQADVGLAMNSGTAA 558          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: ATKB_BACAC (Potassium-transporting ATPase B chain OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=kdpB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.013e-13
Identity = 55/200 (27.50%), Postives = 97/200 (48.50%), Query Frame = 1
Query:   13 PIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDES--RKIKEAVNASSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASA 606
            P GR+V+++   K   S+S +R     G  +        SG +    +K   G+V  +    +S+  +  + + +  +  S   G        N    LI+L+D  +PG+ +   +L+    ++ +M TGD+  +A  +A   G++E     KPEDK+  +K+  +D G  + M G+G NDAPALA A VG+ +    +A
Sbjct:  364 PEGRSVIEYVQAK---SISYNRELAEQGEFIPFKAETRMSGVDLQDGMKVRKGAVGSVIEWVRSQGGTIPKDVNQKADFISKEGGTPLVVAVDNRIYGLIYLKDTVKPGMRERFEQLRQMG-IKTVMCTGDNPLTAATIAKEAGVDEFVAECKPEDKIAVIKA-EQDKGKLVAMTGDGTNDAPALAQADVGLAMNSGTTA 558          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: COPA_BACSU (Copper-exporting P-type ATPase A OS=Bacillus subtilis GN=copA PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.177e-12
Identity = 58/196 (29.59%), Postives = 92/196 (46.94%), Query Frame = 1
Query:    1 GTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNASSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVL 588
            G+ HP+G A++     K L    + RFE   G G+ A   G +S   G ++L  S   V+    L + E+   + K  +  S  G           E   L+ + D  +      +A LK+   L V+M+TGD+  +A+ +A   GI  +   + PE K   +    ++ G    MVG+GINDAPALA A +G+ +
Sbjct:  535 GSEHPLGEAIIAGVKDKGLEIPKLTRFEAKVGAGILAEAGG-KSILVGTRKLMES-EQVEHGALLAQMEELEAEGKTVMLVSIDG-----------EAAGLVAVADTIKDTSRKAVARLKELG-LDVIMMTGDNRRTAEAIAKEAGIANIIAEVLPEQKAAEIARLQKE-GRQTAMVGDGINDAPALATADIGMAI 715          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: ATKB_CAUCR (Potassium-transporting ATPase B chain OS=Caulobacter crescentus GN=kdpB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.177e-12
Identity = 49/148 (33.11%), Postives = 78/148 (52.70%), Query Frame = 1
Query:  169 GSVDFITSLCKSEDES--RKIKEAVNASSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASA 606
            G+VD +      E +S   ++  AV+  +   G   A       V +IHL+D  +PGV +  A+L+    LR +M+TGD+  +A  +A+  G+++      PEDKL  ++   +  G  + M G+G NDAPALA A VG+ +   A A
Sbjct:  400 GAVDAVYRTLGLEPQSIPTELSVAVDRIARSGGTPLAVSEDGVLVGVIHLKDVVKPGVKERFADLR-RMGLRTVMITGDNPVTAAAIASEAGVDDFLAEATPEDKLRLIRE-EQGKGRLVAMCGDGANDAPALAQADVGVAMQTGAQA 545          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: ATKB_BACHK (Potassium-transporting ATPase B chain OS=Bacillus thuringiensis subsp. konkukian GN=kdpB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.177e-12
Identity = 61/208 (29.33%), Postives = 111/208 (53.37%), Query Frame = 1
Query:   13 PIGRAVVDHSIGKDLPSVSIDRF-----EYFPGRGLTATVNGIESGTEGGKELKASLGSV-DFITSLCKSEDESRKIKEAVNASS---YGRGFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASA 606
            P GR+V+++   K   S+S +R      E+ P +  T  ++G++   +G K  K ++GSV +++ S      +   I + VN  +      G     ++V+ ++  LI+L+D  +PG+ +   +L+    ++ +M TGD+  +A  +A   G++E     KPEDK+  +K+  +D G  + M G+G NDAPALA A VG+ +    +A
Sbjct:  364 PEGRSVIEYVQAK---SISYNRELAEQGEFIPFKAETR-MSGVDL-QDGTKVRKGAVGSVIEWVRS------QGGTIPKDVNQKADFISKEGGTPLVVAVDNRIYGLIYLKDTVKPGMRERFEQLRQMG-IKTVMCTGDNPLTAATIAKEAGVDEFVAECKPEDKIAVIKA-EQDKGKLVAMTGDGTNDAPALAQADVGLAMNSGTTA 558          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: ATKB_BACCZ (Potassium-transporting ATPase B chain OS=Bacillus cereus (strain ZK / E33L) GN=kdpB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.177e-12
Identity = 58/202 (28.71%), Postives = 101/202 (50.00%), Query Frame = 1
Query:   13 PIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNASS---YGRGFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASA 606
            P GR+V+++   K   S+S +R     G  +        SG +     K   G+V  +    +S+  +  I + VN  +      G     ++VN+ +  LI+L+D  +PG+ +   +L+    ++ +M TGD+  +A  +A   G++E     KPEDK+  +K+  +D G  + M G+G NDAPALA A VG+ +    +A
Sbjct:  364 PEGRSVIEYVQAK---SISYNRELAEQGEFVPFKAETRMSGVDLRDGTKVRKGAVSSVIEWVQSQGGT--IPKDVNQKADFISKEGGTPLVVAVNDHIYGLIYLKDTVKPGMRERFEQLRQMG-IKTVMCTGDNPLTAATIAKEAGVDEFVAECKPEDKIAVIKA-EQDKGKLVAMTGDGTNDAPALAQADVGLAMNSGTTA 558          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: ATKB_BACAH (Potassium-transporting ATPase B chain OS=Bacillus thuringiensis (strain Al Hakam) GN=kdpB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.177e-12
Identity = 61/208 (29.33%), Postives = 111/208 (53.37%), Query Frame = 1
Query:   13 PIGRAVVDHSIGKDLPSVSIDRF-----EYFPGRGLTATVNGIESGTEGGKELKASLGSV-DFITSLCKSEDESRKIKEAVNASS---YGRGFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASA 606
            P GR+V+++   K   S+S +R      E+ P +  T  ++G++   +G K  K ++GSV +++ S      +   I + VN  +      G     ++V+ ++  LI+L+D  +PG+ +   +L+    ++ +M TGD+  +A  +A   G++E     KPEDK+  +K+  +D G  + M G+G NDAPALA A VG+ +    +A
Sbjct:  359 PEGRSVIEYVQAK---SISYNRELAEQGEFIPFKAETR-MSGVDL-QDGTKVRKGAVGSVIEWVRS------QGGTIPKDVNQKADFISKEGGTPLVVAVDNRIYGLIYLKDTVKPGMRERFEQLRQMG-IKTVMCTGDNPLTAATIAKEAGVDEFVAECKPEDKIAVIKA-EQDKGKLVAMTGDGTNDAPALAQADVGLAMNSGTTA 553          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: COPB_STAAT (Probable copper-transporting P-type ATPase B OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=copB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.008e-12
Identity = 54/195 (27.69%), Postives = 93/195 (47.69%), Query Frame = 1
Query:    4 TTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNASSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVL 588
            + HP+  ++VD +  K++   +       PG GL   ++         K  K +  S      L   +D   K+ +  N+ SY        +   + + +I   D+ +     ++A+L     +  +MLTGD+   A  VA  +GI++V+  L PEDK + +K    D G  ++MVG+GINDAP+L  A +GI +
Sbjct:  405 SNHPLAISIVDFAKSKNVSFTNPQDVNNIPGVGLEGLIDN--------KTYKITNVSYLDKHKLNYDDDLFTKLAQQGNSISY-------LIEDQQVIGMIAQGDQIKESSKQMVADLLSR-NITPVMLTGDNNEVAHAVAKELGISDVHAQLMPEDKESIIKDYQSD-GNKVMMVGDGINDAPSLIRADIGIAI 582          
The following BLAST results are available for this feature:
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
ATKB_BACC74.046e-1329.81Potassium-transporting ATPase B chain OS=Bacillus ... [more]
ATKB_BACC24.046e-1329.47Potassium-transporting ATPase B chain OS=Bacillus ... [more]
ATKB_BACCN9.013e-1330.00Potassium-transporting ATPase B chain OS=Bacillus ... [more]
ATKB_BACAC9.013e-1327.50Potassium-transporting ATPase B chain OS=Bacillus ... [more]
COPA_BACSU1.177e-1229.59Copper-exporting P-type ATPase A OS=Bacillus subti... [more]
ATKB_CAUCR1.177e-1233.11Potassium-transporting ATPase B chain OS=Caulobact... [more]
ATKB_BACHK1.177e-1229.33Potassium-transporting ATPase B chain OS=Bacillus ... [more]
ATKB_BACCZ1.177e-1228.71Potassium-transporting ATPase B chain OS=Bacillus ... [more]
ATKB_BACAH1.177e-1229.33Potassium-transporting ATPase B chain OS=Bacillus ... [more]
COPB_STAAT2.008e-1227.69Probable copper-transporting P-type ATPase B OS=St... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00179 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00179 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623088 ID=BQ623088; Name=BQ623088; organism=Citrus sinensis; type=EST; length=608bp
GGTACTACCCACCCTATTGGAAGAGCTGTGGTTGACCATAGTATAGGCAA
GGACCTTCCTTCTGTATCAATTGACCGTTTTGAGTATTTTCCTGGTCGAG
GTCTCACAGCAACTGTAAATGGCATTGAGTCAGGAACTGAAGGGGGTAAA
GAATTGAAAGCATCTCTGGGTTCTGTAGATTTTATAACTTCTCTCTGTAA
ATCTGAAGATGAATCAAGAAAGATCAAGGAAGCTGTGAATGCTTCTTCTT
ATGGAAGGGGCTTTGTTCATGCTGCTCTTTCTGTTAATGAAAAGGTAACA
TTGATTCACCTCGAGGATAGGCCTCGCCCAGGAGTTTCAGATGTTATAGC
AGAATTAAAAGATCATGCAAGATTACGTGTGATGATGTTAACTGGTGACC
ATGAGTCTAGTGCGCAGAGAGTAGCAAATGCTGTTGGCATCAATGAAGTT
TACTGCAGCCTGAAGCCTGAGGATAAGCTCAATCATGTGAAGAGTACCTC
CAGGGATATGGGAGGAGGTTTGATCATGGTTGGTGAAGGCATTAATGATG
CGCCAGCACTCGCAGCTGCAACTGTGGGAATTGTTCTTGCTCAACGGGCT
AGTGCAAC
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