BQ623097

Overview
NameBQ623097
Unique NameBQ623097
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8 contig Csv1_Contig8:1..719. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623097 vs. ExPASy Swiss-Prot
Match: GDL60_ARATH (GDSL esterase/lipase At3g62280 OS=Arabidopsis thaliana GN=At3g62280 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 66/253 (26.09%), Postives = 101/253 (39.92%), Query Frame = 2
Query:    2 PNLKPQDLVTGVSFASGGAGYDPLTSKVASALSMSDQLDLFKKALETIKATAGEEATANILSKGLFMVVSGSDDIANTYLSTPFRRGQYDIN-SYTDLTASSALSFL------QELYGVGARRIGVLSLPPIGCVPVQRTLNGGIAR-----GCSDFANQAAQIYNSKLQSVVDSLSKEFPDSRFVYFDIYNPLNSLIQNPPQYGFEVADKGCCGTG----NLEGSILCNRLEDAATCPDASKYIFWDSYHPT 712
            PN K      GV+FA  GA   P+ S    A+ +   +    ++ E I +   +    N     L+M+  G +D+             YD N +Y  +        L      Q +Y  G R+  V +  P+GC P +  ++          GC    N+ A+ +N  L S+ + L  +F D+  VY DIY+    L  +   YGF      CCG G    N +    C +   +  C D +K I WD  H T
Sbjct:  102 PNFK-----RGVNFAVSGATALPIFS-FPLAIQIRQFVHFKNRSQELISSGRRDLIDDNGFRNALYMIDIGQNDLLLAL---------YDSNLTYAPVVEKIPSMLLEIKKAIQTVYLYGGRKFWVHNTGPLGCAPKELAIHLHNDSDLDPIGCFRVHNEVAKAFNKGLLSLCNELRSQFKDATLVYVDIYSIKYKLSADFKLYGFVDPLMACCGYGGRPNNYDRKATCGQ-PGSTICRDVTKAIVWDGVHYT 338          
BLAST of BQ623097 vs. ExPASy Swiss-Prot
Match: GDL54_ARATH (GDSL esterase/lipase At3g27950 OS=Arabidopsis thaliana GN=At3g27950 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11
Identity = 66/243 (27.16%), Postives = 102/243 (41.98%), Query Frame = 2
Query:   32 GVSFASGGAGYDPLTSKVASALSMSDQLDLF----KKALETIKATAGEE---ATANILSKGLFMVVSGSDDIANTYLSTPFRRGQYDINSYTDLTASSALSFLQELYGVGARRIGVLSLPPIGCVPVQRTLNGGIAR---GCSDFANQAAQIYNSKLQSVVDSLSKEFPDSRFVYFDIYNPLNSLIQNPPQYGFEVADKGCC----GTGNLEG-SILCNRLE-DAATCPDASKYIFWDSYHPT 712
            G +FA+GG+   P T    S   +  Q+  F     + L     T G+    +  N  SK L+ +  G +D+A  + +      +  + +   L   +    L+ LY  GAR   + +  P GC+P        I R   GC    N  A  +N +L++ +  L KE P S F Y D+Y+   +LI      GF      CC    G G   G +I  N  E  +++C +   +I WD  H T
Sbjct:  102 GANFATGGSCIRP-TLACFSPFHLGTQVSQFIHFKTRTLSLYNQTNGKFNRLSHTNYFSKALYTLDIGQNDLAIGFQNMT----EEQLKATIPLIIENFTIALKLLYKEGARFFSIHNTGPTGCLPYLLKAFPAIPRDPYGCLKPLNNVAIEFNKQLKNKITQLKKELPSSFFTYVDVYSAKYNLITKAKALGFIDPFDYCCVGAIGRGMGCGKTIFLNGTELYSSSCQNRKNFISWDGIHYT 339          
The following BLAST results are available for this feature:
BLAST of BQ623097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
GDL60_ARATH6.708e-1126.09GDSL esterase/lipase At3g62280 OS=Arabidopsis thal... [more]
GDL54_ARATH8.761e-1127.16GDSL esterase/lipase At3g27950 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00188 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00188 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623097 ID=BQ623097; Name=BQ623097; organism=Citrus sinensis; type=EST; length=719bp
TCCAAATCTAAAGCCTCAAGACCTTGTTACTGGCGTAAGTTTTGCCTCAG
GTGGAGCTGGATATGATCCTCTTACATCAAAAGTAGCGTCTGCGTTATCA
ATGTCGGATCAATTGGACTTGTTCAAGAAAGCATTAGAGACAATAAAAGC
TACAGCGGGAGAAGAAGCAACTGCAAATATACTATCAAAAGGCTTATTCA
TGGTGGTCTCCGGAAGTGATGATATTGCAAATACTTATTTATCAACTCCA
TTCAGGAGAGGCCAATATGATATCAATTCCTATACTGATTTAACAGCTAG
TTCAGCTTTAAGTTTCTTACAGGAACTGTATGGAGTTGGAGCAAGGAGAA
TAGGAGTACTTAGTTTACCACCAATTGGGTGTGTGCCAGTACAGAGAACA
CTCAATGGGGGCATCGCTAGAGGCTGTTCAGATTTTGCCAATCAAGCTGC
TCAAATCTACAACTCGAAGCTCCAATCTGTAGTTGATTCTCTCAGTAAAG
AGTTTCCAGATTCAAGATTTGTCTACTTTGATATCTACAATCCACTGAAT
TCTCTTATCCAAAACCCTCCTCAATATGGGTTTGAAGTGGCAGATAAAGG
GTGCTGCGGCACTGGAAATTTAGAGGGTAGCATACTGTGCAATCGTTTGG
AGGATGCAGCGACATGCCCGGATGCATCCAAATACATATTCTGGGACAGT
TACCATCCCACGGGAAAGG
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