BQ623098

Overview
NameBQ623098
Unique NameBQ623098
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3096 contig Csv1_Contig3096:616..1227. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623098 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.576e-41
Identity = 80/155 (51.61%), Postives = 105/155 (67.74%), Query Frame = 3
Query:   18 QGLDGLASRSTEYYKQGARFAKWRTVVSIPCG-PSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEA 479
            +GLDGL +R  EYY  GARFAKWR V++I    PS   ++  A  LARYAA+ Q+ GLVP+VEPE+++DGDH IE   EV E     +F  L E NVVLEG +LK SMV  G   +E+AS E +A+ T+  LK  VP  +PGI+FLSGGQ++ ++
Sbjct:  115 EGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANAHALARYAALCQEQGLVPMVEPEVIMDGDHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQS 269          

HSP 2 Score: 38.1206 bits (87), Expect = 4.576e-41
Identity = 18/34 (52.94%), Postives = 22/34 (64.71%), Query Frame = 2
Query:  476 STLNLNAMNQAPN-PWHVSFFYARALQNTVLKTW 574
            ST +LN M+Q  N PW +SF Y RA+Q   LK W
Sbjct:  269 STAHLNEMHQLGNLPWPLSFSYGRAMQQAALKLW 302          
BLAST of BQ623098 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.005e-40
Identity = 88/159 (55.35%), Postives = 111/159 (69.81%), Query Frame = 3
Query:    6 ESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEA 479
            E+  QG D L +R  +YYK GARFAKWR V+ I P  PS L++++ A GLARYA I Q+NGLV  VEPEIL DG H I +   V E V +  +  L + +V+LEG LLKP+MVTPG++   K SPE I +YT+  L+R VP AVPGI+FLSGGQSE +A
Sbjct:  117 ETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPNEPSELSIQQNAQGLARYAIICQENGLVLFVEPEILTDGSHDIAKCAAVTETVLAACYKALNDQHVLLEGTLLKPNMVTPGSD-SPKVSPEVIGEYTVNALRRTVPAAVPGIVFLSGGQSEEQA 274          
BLAST of BQ623098 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.801e-40
Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = 3
Query:   18 QGLDGLASRSTEYYKQGARFAKWRTVVSIPCG-PSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEA 479
            +GLDGL +R  EYY  GARFAKWR V++I    PS   ++  +  LARYAA+ Q+ GLVP+VEPE+++DG H IE   EV E     +F  L E NVVLEG +LK SMV  G   +E+AS E +A+ T+  LK  VP  +PGI+FLSGGQ++ ++
Sbjct:  115 EGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANSHALARYAALCQEQGLVPMVEPEVIMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQS 269          

HSP 2 Score: 38.1206 bits (87), Expect = 3.801e-40
Identity = 18/34 (52.94%), Postives = 22/34 (64.71%), Query Frame = 2
Query:  476 STLNLNAMNQAPN-PWHVSFFYARALQNTVLKTW 574
            ST +LN M+Q  N PW +SF Y RA+Q   LK W
Sbjct:  269 STAHLNEMHQLGNLPWPLSFSYGRAMQQAALKLW 302          
BLAST of BQ623098 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 3.323e-39
Identity = 87/159 (54.72%), Postives = 112/159 (70.44%), Query Frame = 3
Query:    6 ESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCG-PSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEA 479
            E+  QGLD L +R  +YY+ GARFAKWR    I    PS L+++E A  LARYA I Q+NGLVPIVEPE+L  G H I++   V E V + VF  L  ++V+LEG LLKP+MVTPG++   K +PE IA+YT+T L+R VPPA+PGI+FLSG Q E +A
Sbjct:  117 ETTTQGLDSLGARCQQYYEAGARFAKWRAFFKIGATEPSVLSIQEDARVLARYAIICQENGLVPIVEPEVLTGGSHDIKKCAAVTETVLAAVFKALNYHHVLLEGTLLKPNMVTPGSD-SPKVAPELIAEYTVTALRRTVPPAIPGIVFLSGIQREEQA 274          
BLAST of BQ623098 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.464e-34
Identity = 87/161 (54.04%), Postives = 106/161 (65.84%), Query Frame = 3
Query:    6 ESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCG-PSALAVKEAAWGL-ARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHK-EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEA 479
            E   QGLD L +R  +Y K GA+FAKWR V  I    PS  A+KE A  L +RYA+I Q NGLVPIVEPEIL DG+H + R  ++ E V S V+  L E++V LEG LLKP+MVT G     EK S   I   T+T L+R VP AVPG++FLSGGQSE +A
Sbjct:  122 EGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNMVTSGQSFTGEKPSNADIGLATVTALQRGVPSAVPGVVFLSGGQSEEDA 282          
BLAST of BQ623098 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.038e-24
Identity = 64/154 (41.56%), Postives = 90/154 (58.44%), Query Frame = 3
Query:   21 GLDGLASRSTEYYKQGARFAKWRTVVSIPCG-PSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEA 479
            GL+ L  R      + A FAKWR++     G PS   + E    LA+YA I Q NGLVPIVEPE+ L+GD+ ++R+ EV  ++ S +  YL    V + G+L+K S VT G    EK +P+ +A +TL  L   +P  +PGI+FLSGG    +A
Sbjct:  118 GLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINENCSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDA 271          
BLAST of BQ623098 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.668e-19
Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = 3
Query:  321 LLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEA 479
            LLKP+MVTPG     K SPE IA  T+T L+R VPPAVPG+ FLSGGQSE EA
Sbjct:    1 LLKPNMVTPGHSCPTKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEA 53          

HSP 2 Score: 45.8246 bits (107), Expect = 1.668e-19
Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 2
Query:  476 STLNLNAMNQAP--NPWHVSFFYARALQNTVLKTWQGRPENTEAA 604
            +++NLNA+N  P   PW ++F Y RALQ + L  W+G+ +N  AA
Sbjct:   53 ASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAA 97          
BLAST of BQ623098 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.239e-19
Identity = 36/61 (59.02%), Postives = 44/61 (72.13%), Query Frame = 3
Query:  297 NNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEA 479
            +N+ LEG LLKP+MVT G    +K +PE IA+ T+T L R VP AV GI FLSGGQSE +A
Sbjct:    1 HNMFLEGTLLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDA 61          

HSP 2 Score: 47.7506 bits (112), Expect = 2.239e-19
Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 2
Query:  476 STLNLNAMNQAPN--PWHVSFFYARALQNTVLKTWQGRPE 589
            +T+NLNA+NQ P   PW ++F Y RALQ +VLK W G+ E
Sbjct:   61 ATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
The following BLAST results are available for this feature:
BLAST of BQ623098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF1_XANCP4.576e-4151.61Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_PEA3.005e-4055.35Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_XANAC3.801e-4050.32Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_ARATH3.323e-3954.72Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_CAEEL2.464e-3454.04Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALF_ENCCU1.038e-2441.56Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]
ALDOC_CHICK1.668e-1967.92Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALF_LYMST2.239e-1959.02Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00189 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00189 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623098 ID=BQ623098; Name=BQ623098; organism=Citrus sinensis; type=EST; length=611bp
ACAATGAATCGTGGTGCCAAGGCTTGGATGGATTGGCATCAAGATCCACT
GAATACTACAAGCAAGGTGCTCGATTTGCTAAGTGGAGGACAGTTGTTAG
CATTCCATGTGGTCCTTCTGCTCTGGCTGTGAAGGAAGCTGCATGGGGCC
TTGCACGATATGCTGCTATTTCTCAGGATAATGGACTTGTGCCTATAGTG
GAACCCGAGATCCTTCTTGATGGGGACCACCCAATTGAGAGGACCCTTGA
AGTGGCAGAAAAGGTCTGGTCAGAAGTCTTTTTCTACTTGGCAGAAAACA
ATGTCGTTCTTGAGGGAATTCTACTTAAACCCAGCATGGTCACGCCAGGT
GCTGAACACAAGGAGAAGGCCTCTCCAGAGACCATTGCTAAATATACACT
TACAATGCTCAAGAGGAGAGTACCCCCTGCAGTCCCAGGAATCATGTTTT
TGTCTGGAGGACAATCAGAAGTGGAAGCACATTGAACTTGAATGCGATGA
ACCAAGCCCCCAACCCCTGGCACGTGTCCTTTTTTTATGCCCGTGCACTT
CAAAACACTGTTCTTAAAACATGGCAAGGTCGTCCTGAGAATACTGAAGC
TGCCCAAAGTC
back to top