BQ623109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS3_AMAHP (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS3 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 7.956e-42 Identity = 73/101 (72.28%), Postives = 85/101 (84.16%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 304 SD LL ++ YL+ +GWIPC+EFELE +VYRE+H+SPGY DGRYWTMWKLPMYGCTD QVL EV E +K YP +F+RIIGFDNKRQVQC+SFIA KPPG Sbjct: 79 SDAQLLAQVQYLLNNGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAFKPPG 179
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS_RAPSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Raphanus sativus GN=RBCS PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.039e-41 Identity = 73/100 (73.00%), Postives = 87/100 (87.00%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 301 SD L KE++YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP++ +RIIGFDN RQVQCISFIA KPP Sbjct: 77 SDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNALIRIIGFDNNRQVQCISFIAYKPP 176
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.039e-41 Identity = 74/99 (74.75%), Postives = 85/99 (85.86%), Query Frame = 2 Query: 5 DEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 301 D L KE+ YL+R GWIPCLEFELE G+VYREH++S GYYDGRYWTMWKLPM+GCTDA+QVLKE+ E + YP+ F+RIIGFDN RQVQCISFIA KPP Sbjct: 78 DAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSLGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPP 176
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.039e-41 Identity = 75/97 (77.32%), Postives = 85/97 (87.63%), Query Frame = 2 Query: 8 EALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 + LLKE+ YL+R GW+PCLEFELEKG+VYREH+KSPGYYDGRYWTMWKLPM+G TDA+QVLKE+ EV YP +FVRIIGFDN RQVQCISFIA P Sbjct: 81 DQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTP 177
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.039e-41 Identity = 75/97 (77.32%), Postives = 85/97 (87.63%), Query Frame = 2 Query: 8 EALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 + LLKE+ YL+R GW+PCLEFELEKG+VYREH+KSPGYYDGRYWTMWKLPM+G TDA+QVLKE+ EV YP +FVRIIGFDN RQVQCISFIA P Sbjct: 81 DQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTP 177
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS_BETVE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.357e-41 Identity = 75/102 (73.53%), Postives = 88/102 (86.27%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPGV 307 S E L KE++YL+R IPCLEFELE G+VYREH++SPGYYDGRYWTMWKLPM+GC D++QVLKE+ E +K YP +F+RIIGFDNKRQVQ ISFIA KPPGV Sbjct: 81 SSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKPPGV 182
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS1B_ARATH (Ribulose bisphosphate carboxylase small chain 1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.357e-41 Identity = 73/100 (73.00%), Postives = 87/100 (87.00%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 301 +D L KE++YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP +F+RIIGFDN RQVQCISFIA KPP Sbjct: 77 TDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 3.023e-41 Identity = 72/99 (72.73%), Postives = 87/99 (87.88%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 ++E L KE+ YLIR GWIPCLEFELEKG+VYRE+H+SPGYYDGRYWTMW+LP++G TD++QVLKE+ + + EYP SF+RIIGFDN RQVQCISFIA P Sbjct: 79 TEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTP 177
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS1_WHEAT (Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 3.023e-41 Identity = 74/101 (73.27%), Postives = 89/101 (88.12%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 304 S EAL K+++YLIRS W+PCLEF + G+V+REH+ SPGYYDGRYWTMWKLPM+GCTDATQVL EV EV+KEYP ++VR+IGFDN RQVQC+SFIA +PPG Sbjct: 68 STEALSKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRPPG 167
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS_MANES (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 8.796e-41 Identity = 73/99 (73.74%), Postives = 82/99 (82.83%), Query Frame = 2 Query: 8 EALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 304 E L E+ YL+RSGWIPCLEFELE G VYREH + PGYYDGRYWTMWKLPM+GCTDA QVLKE+ E+ K +P + RIIGFDN RQVQCISF+A KPPG Sbjct: 83 EQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWKLPMFGCTDAAQVLKELDELIKHHPDGYARIIGFDNVRQVQCISFLAYKPPG 181 The following BLAST results are available for this feature:
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623109 ID=BQ623109; Name=BQ623109; organism=Citrus sinensis; type=EST; length=454bpback to top |