BQ623121

Overview
NameBQ623121
Unique NameBQ623121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length542
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1283 contig Csv1_Contig1283:141..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.352e-24
Identity = 69/133 (51.88%), Postives = 81/133 (60.90%), Query Frame = 3
Query:   60 MSLIPSIFGNRSVFDPFSSDVWA---PLG---SSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKE--DKND-KWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            MSL+ S  GN  V DP S D WA   P G   S +       + +VDWKET  AHVF ADLPG+          DG VL ISGER+ E++   KND +WH VER  GKF RRFRLP  A++DQV ASM+NGVL
Sbjct:    1 MSLVRS--GN--VLDPMSVDFWADADPFGAVRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVL 129          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.307e-24
Identity = 62/136 (45.59%), Postives = 78/136 (57.35%), Query Frame = 3
Query:   54 AKMSLIPSIFGNRSVF---------DPFSSDVWAPLGSSSNEVS-TFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            AK SL+P I    ++          DPF      P G   +E S T + A+VDWKET E HV   D+PGL          + RVL++SGER  E++ K D WHRVER  GKF R+F+LP+N  +D VKA MENGVL
Sbjct:   26 AKASLLPFIDSPNTLLSDLWSDRFPDPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVL 161          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.712e-24
Identity = 57/111 (51.35%), Postives = 68/111 (61.26%), Query Frame = 3
Query:  102 DPFSSDVWAPLGSSSNEVSTFAS-AQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            DPF      P G   +E S   S A+VDWKET E HV   D+PGL          + RVL++SGER  E+E K D WHRVER  GKF R+FRLP+N  +D VKA +ENGVL
Sbjct:   43 DPFRVLEHIPFGVDKDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVL 153          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.282e-22
Identity = 51/110 (46.36%), Postives = 66/110 (60.00%), Query Frame = 3
Query:  102 DPFSSDVWAPLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            DPF      PLG   +     + A+VDWKET E H    D+PGL          +  VL++SGER  E+E K D+WHRVER  GKF R+F+LP+N  ++ VKA +ENGVL
Sbjct:   48 DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVL 157          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 7.679e-20
Identity = 51/130 (39.23%), Postives = 75/130 (57.69%), Query Frame = 3
Query:   54 AKMSLIPSIFGNRSVFDPFSSDVWAPLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGER----SVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            A+   +P + G  +  DPF      P G   ++V+  + A+VDW+ET +AH    D+PG+          D RVL+ISGER    + E++   D WHR ER  G+F R+ RLP+NA +D + AS++NGVL
Sbjct:   38 ARDEAVPEL-GLLAAADPFRILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVL 166          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.310e-19
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 3
Query:  273 VLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            +LQISGER+VEKEDKND WHRVER  GKF+R FRLP+NAK+DQVKASMENGVL
Sbjct:    1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVL 53          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.448e-18
Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = 3
Query:  165 ASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            ++A +DWKET  AHVF AD+PG+          + +VL+ISG+R+   E+K ++WHRVER   +FVR  RLP NA  D V A+++NGVL
Sbjct:   68 STASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVL 156          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.355e-16
Identity = 47/123 (38.21%), Postives = 73/123 (59.35%), Query Frame = 3
Query:   96 VFDPFSSDVWAPL---GSS-------SNEVSTFASAQVDWKETREAHVFKADLP-GLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            +FD  + D W P    G++       +++ S FA+  ++ +ET EA+VF+ADLP G+          +G VL I+GERSV +E+K  + H +ER    F  RF LP++A +D V+ASM+ G+L
Sbjct:    6 LFDTLAFDAWNPFSIFGTTVAADAWLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGML 128          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.438e-15
Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 3
Query:  165 ASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVER-----GRGKFVRRFRLPENAKIDQVKASMENGVL 431
            ++A +DW E+  +H+FK ++PG           +G VL I GE   E++ +N  WH  ER     G  +F+RR  LPEN K+DQVKA +ENGVL
Sbjct:   20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVL 113          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.269e-14
Identity = 51/139 (36.69%), Postives = 77/139 (55.40%), Query Frame = 3
Query:   63 SLIPSIFGNRSVFDPFSSDVWAPL--------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDG-RVLQISGER-----SVEKEDKND--KWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            +L+P  +G   + DPF     +PL         +++ E +  A A+ DWKET EAHV   D+PG+          +  RVL++SGER     + E+E + D  +WHR ER  G+F RRFR+P  A + +V A +++GVL
Sbjct:   29 ALVPYGYGYM-LDDPFRVLEQSPLRPAGGVAAAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVL 166          
The following BLAST results are available for this feature:
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HS166_ORYSJ1.352e-2451.8816.6 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP41_PEA2.307e-2445.5922.7 kDa class IV heat shock protein OS=Pisum sati... [more]
HSP41_SOYBN6.712e-2451.3522.0 kDa class IV heat shock protein OS=Glycine ma... [more]
HSP22_ARATH6.282e-2246.3622.0 kDa heat shock protein OS=Arabidopsis thalian... [more]
HS232_ORYSJ7.679e-2039.2323.2 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP12_SOYBN1.310e-1983.02Class I heat shock protein (Fragment) OS=Glycine m... [more]
HS189_ORYSJ1.448e-1848.3118.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS17B_ORYSJ1.355e-1638.2117.9 kDa heat shock protein 2 OS=Oryza sativa subs... [more]
HS157_ARATH7.438e-1542.5515.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HS219_ORYSJ1.269e-1436.6921.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00212 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00212 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623121 ID=BQ623121; Name=BQ623121; organism=Citrus sinensis; type=EST; length=542bp
CAATTGATAAATAAGCAAACGCTTTCGAAGAAAGTGCTCGTCGCTTTGAT
TAAGCAAAAATGTCTTTGATTCCATCTATATTCGGAAACAGGAGCGTGTT
CGACCCATTTTCCTCGGACGTCTGGGCGCCCCTTGGCTCCTCCAGCAACG
AGGTGTCAACATTCGCCAGTGCTCAAGTCGATTGGAAAGAAACCCGGGAA
GCTCATGTTTTCAAGGCGGATCTTCCGGGGCTCAAGAAAGAGGAAGTGAA
GGTTGAAGTTGAGGACGGGAGAGTCCTTCAGATCAGCGGTGAGAGGAGCG
TCGAGAAGGAAGACAAGAACGACAAATGGCACCGTGTTGAGAGGGGCCGC
GGCAAGTTCGTGAGGAGGTTCCGGTTGCCTGAGAATGCCAAGATCGATCA
AGTTAAGGCATCAATGGAGAATGGTGTCCTCACCGTCACTGTTCCCAAAG
TGGAGGAGAAGAAGCCTGAGGTCAAAATCCATTTCAGATCACCTGGTTGA
AACTCTCCGTTAATTGCAGCCTTTTTAATTTGGTTCTTGTTT
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