BQ623121

Overview
NameBQ623121
Unique NameBQ623121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length542
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1283 contig Csv1_Contig1283:141..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.961e-13
Identity = 38/98 (38.78%), Postives = 56/98 (57.14%), Query Frame = 3
Query:  156 STFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISG---ERSVEKEDKNDK---WHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            S  A+A +DW ET  +HV + ++PGL          DG VL + G     + EKE + +K   WH  ERGR +F R   LP   +++Q++AS++NGVL
Sbjct:   25 SASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVL 122          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.645e-12
Identity = 38/94 (40.43%), Postives = 54/94 (57.45%), Query Frame = 3
Query:  150 EVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            +    A+   D KE   A+ F  D+PGL          D RVL +SGER  E+ + + K+ R+ER  GKF+R+F LP+NA +D+V A   +GVL
Sbjct:   48 DARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVL 141          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.645e-12
Identity = 38/103 (36.89%), Postives = 60/103 (58.25%), Query Frame = 3
Query:  129 PLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKND--KWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            P+ +   +    A+   D KE   ++VF AD+PG+          D  VL +SGER+  ++D+ D  K+ R+ER  GKF+R+F LPENA ++ + A  ++GVL
Sbjct:   42 PIRAYVRDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVL 144          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.645e-12
Identity = 40/102 (39.22%), Postives = 55/102 (53.92%), Query Frame = 3
Query:  126 APLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            AP      +    A+   D KE   ++VF  D+PGL          +  VL ISGER  E+E +  K+ R+ER  GKF+R+F LPENA  D + A  ++GVL
Sbjct:   31 APSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVL 132          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.697e-12
Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 3
Query:  102 DPFSSDVWAPLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            D    ++ AP  +   +    A+   D KE   ++VF  D+PG+          D  VL ISGER  E+E +  K+ ++ER  GK +R+F LPENA I+ + A  ++GVL
Sbjct:   20 DTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVL 129          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.005e-11
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 3
Query:  126 APLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            AP  S   +    A+   D KE   ++VF+ D+PGL          D  +L I GER  ++E +  K+ R+ER  GK +R+F LPENA  D + A  ++GVL
Sbjct:   35 APTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVL 136          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.239e-11
Identity = 40/94 (42.55%), Postives = 54/94 (57.45%), Query Frame = 3
Query:  150 EVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            +    A+   D KE   A+ F  D+PGL          D RVL ISGER  E E ++ K+ R+ER  GKF+R+F LP+NA +D+V A   +GVL
Sbjct:   39 DARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRRE-EREDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVL 131          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HS178_ORYSJ (17.8 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.8 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.925e-11
Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 3
Query:  165 ASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQI--------------SGERSVEKEDKND--KWHRVERGRGK---FVRRFRLPENAKIDQVKASMENGVL 431
            A   +DW+ET  AHVF+ DLPGL          DG +L++              +G+ S E+E++ND  +WH  ER  G+    V +FRLPE+A  D+  A M +GVL
Sbjct:   25 ARPPMDWRETPVAHVFEMDLPGLAKDQVAVEVVDGHILRVRAGGEHEDANNAAKAGKASGEEEEENDGVRWHCRERAAGRRRAAVTQFRLPEDAAADEASARMADGVL 132          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: SP21_STIAU (Spore protein SP21 OS=Stigmatella aurantiaca GN=hspA PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 3
Query:  186 KETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            +ET+EA++FKADLPG+            RV  +SG+R  EK +++++++  ER  G F R F LPE    D V+A ++NGVL
Sbjct:   59 RETKEAYIFKADLPGVDEKDIEVTLTGDRV-SVSGKREREKREESERFYAYERTFGSFSRAFTLPEGVDGDNVRADLKNGVL 139          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 35/94 (37.23%), Postives = 54/94 (57.45%), Query Frame = 3
Query:  150 EVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            +    A+   D KE   ++VF  D+PGL             VL ISG+R+ E+E +  K+ R+ER  GKF+++F LPE+A  D++ A  ++GVL
Sbjct:   44 DARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVL 137          
The following BLAST results are available for this feature:
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HSP16_ORYSJ6.961e-1338.7816.0 kDa heat shock protein, peroxisomal OS=Oryza ... [more]
HSP22_MAIZE2.645e-1240.4317.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP22_IPONI2.645e-1236.8918.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP21_SOLPE2.645e-1239.2217.3 kDa class II heat shock protein OS=Solanum pe... [more]
HSP21_PEA7.697e-1235.4517.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP21_SOYBN1.005e-1137.2517.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP23_MAIZE2.239e-1142.5517.0 kDa class II heat shock protein OS=Zea mays G... [more]
HS178_ORYSJ2.925e-1137.9617.8 kDa heat shock protein OS=Oryza sativa subsp.... [more]
SP21_STIAU8.510e-1141.46Spore protein SP21 OS=Stigmatella aurantiaca GN=hs... [more]
HSP21_HELAN8.510e-1137.2317.9 kDa class II heat shock protein OS=Helianthus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00212 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00212 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623121 ID=BQ623121; Name=BQ623121; organism=Citrus sinensis; type=EST; length=542bp
CAATTGATAAATAAGCAAACGCTTTCGAAGAAAGTGCTCGTCGCTTTGAT
TAAGCAAAAATGTCTTTGATTCCATCTATATTCGGAAACAGGAGCGTGTT
CGACCCATTTTCCTCGGACGTCTGGGCGCCCCTTGGCTCCTCCAGCAACG
AGGTGTCAACATTCGCCAGTGCTCAAGTCGATTGGAAAGAAACCCGGGAA
GCTCATGTTTTCAAGGCGGATCTTCCGGGGCTCAAGAAAGAGGAAGTGAA
GGTTGAAGTTGAGGACGGGAGAGTCCTTCAGATCAGCGGTGAGAGGAGCG
TCGAGAAGGAAGACAAGAACGACAAATGGCACCGTGTTGAGAGGGGCCGC
GGCAAGTTCGTGAGGAGGTTCCGGTTGCCTGAGAATGCCAAGATCGATCA
AGTTAAGGCATCAATGGAGAATGGTGTCCTCACCGTCACTGTTCCCAAAG
TGGAGGAGAAGAAGCCTGAGGTCAAAATCCATTTCAGATCACCTGGTTGA
AACTCTCCGTTAATTGCAGCCTTTTTAATTTGGTTCTTGTTT
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