CB304455
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_ANTSP (Tryptophan synthase alpha chain OS=Antithamnion sp. GN=trpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.420e-12 Identity = 39/88 (44.32%), Postives = 52/88 (59.09%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 535 VSS GVTG R I V L IK+ + K + +GFGIS PEH++++ W DGV+VGSA VK L A ++ + + KSLK A Sbjct: 174 VSSTGVTGVRDDIDIKVMELSNYIKKVSNKFIMLGFGISTPEHIKKIMKWNIDGVVVGSAFVKKL-SALKIDDRISSISSLCKSLKKA 260
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_BACHD (Tryptophan synthase alpha chain OS=Bacillus halodurans GN=trpA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.466e-12 Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSP-------EEGLKELEKFAKSLKSA 535 VSS+GVTG R + V L+ +K + PV VGFGIS+ E V+ +A ADGV+VGSA+VKL+GE + E+GL ++++F L S+ Sbjct: 172 VSSLGVTGLRDELDPRVHEFLQTVKTHASVPVVVGFGISRREQVEALAE-NADGVVVGSAIVKLVGELEDELNDPEKLEDGLFKIKRFVSELISS 265
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_LACCA (Tryptophan synthase alpha chain OS=Lactobacillus casei GN=trpA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.618e-12 Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VSS+G+TG R ++ L+ EIK+ T P A+GFGI PE Q +AG ADGVI+GSA+V L+ A+ ++ +EKF K ++ A+ Sbjct: 172 VSSMGITGERDEFFAGLKALVAEIKQYTNVPTAIGFGIHTPEQAQTMAGI-ADGVIIGSAIVDLV--AKEKQQAPAAIEKFTKQIRVAV 257
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_CYAME (Tryptophan synthase alpha chain OS=Cyanidioschyzon merolae GN=trpA PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 9.950e-12 Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 535 +S GVTG + L+ E+K+ T P+A+GFGISK E V+ V WGADGVI+GSA +++L E+G+ +L ++ +K + Sbjct: 158 ISRTGVTGLETEFDKQIPKLIGELKKVTKAPIALGFGISKSEQVKLVKSWGADGVIIGSACMQIL-----LEKGVDQLSEWISVMKKS 240
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA2_CYACA (Tryptophan synthase alpha chain OS=Cyanidium caldarium GN=trpA PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 9.950e-12 Identity = 33/88 (37.50%), Postives = 56/88 (63.64%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 535 VS GVTG A + ++ E+K+ TT P+A+GFGI + + +Q V WGADGVI+G+A +++L E+G+ +L ++ ++K + Sbjct: 157 VSRTGVTGVDAHFDNQIPNMIAELKQVTTTPIALGFGIHQKQQLQLVKSWGADGVIIGTACMQIL-----LEKGVDQLTEWISAMKKS 239
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_THEPX (Tryptophan synthase alpha chain OS=Thermoanaerobacter sp. (strain X514) GN=trpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.697e-11 Identity = 35/89 (39.33%), Postives = 56/89 (62.92%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS GVTGAR I ++ ++ + + T P A+GFGIS PE +++ + +DG+IVGSA+V+ + + + E L+E++ F SLK L Sbjct: 175 VSITGVTGAREDIETDIEEYMKTVSQYTNMPKAIGFGISTPEMAKKLKDF-SDGIIVGSALVERIAKGYNKSEMLQEVKSFVSSLKEVL 262
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_SOLUE (Tryptophan synthase alpha chain OS=Solibacter usitatus (strain Ellin6076) GN=trpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.697e-11 Identity = 38/86 (44.19%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 278 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLK 535 VS GVTG R S+S V L++ ++ +T P+AVGFGISKPEHV ++ G + V+VGSA V+L+ + +LE F + LK Sbjct: 176 VSRTGVTGERESLSASVAPLIQAVRAATDLPLAVGFGISKPEHVAEL-GSQVEAVVVGSAFVRLIEQNAESAALEIQLESFTRELK 260
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_METKA (Tryptophan synthase alpha chain OS=Methanopyrus kandleri GN=trpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.697e-11 Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = -1 Query: 281 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSL 535 +S GVTGAR +S L+R +++ PVAVGFGIS+ HV++V GADG IVGSA +K + ++ E + + + AK L Sbjct: 176 ISRYGVTGARRDLSEDTLELVRWVRDHVDVPVAVGFGISERWHVEEVIAAGADGAIVGSAFIKEIHRSEDIAEAEERVRELAKEL 260
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_METB6 (Tryptophan synthase alpha chain OS=Methanoregula boonei (strain 6A8) GN=trpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.697e-11 Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 535 VS +GVTGAR +++ LL ++ T P+A+GFGIS PEHV GADGVIVGSA+V ++ + +P+ ++L ++ +K A Sbjct: 174 VSVLGVTGARKTVAPEALALLNRVRSHTDLPLAIGFGISTPEHVTTCNLAGADGVIVGSAIVDIVEKNLGNPDAMEQDLRRYVSVMKKA 262
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_STRAW (Tryptophan synthase alpha chain OS=Streptomyces avermitilis GN=trpA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.895e-11 Identity = 38/84 (45.24%), Postives = 51/84 (60.71%), Query Frame = -1 Query: 281 SSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSL 532 S +GVTG RAS+ Q L+R + +T PV VG G+S +VAG+ ADGVIVGSA VKL+ +A+ GL+ + A L Sbjct: 187 SLMGVTGTRASVGEQAQDLVRRTRATTDLPVCVGLGVSNATQAAEVAGF-ADGVIVGSAFVKLMLDAEDEAAGLEAVRALAGEL 269 The following BLAST results are available for this feature:
BLAST of CB304455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304455 ID=CB304455; Name=CB304455; organism=Citrus sinensis; type=EST; length=535bpback to top |