CB304455
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_METBF (Tryptophan synthase alpha chain OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=trpA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.895e-11 Identity = 42/89 (47.19%), Postives = 52/89 (58.43%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS +GVTGAR +S + LL ++ T P AVGFGIS E +V GAD VIVGSA VK++ E + E LE AK LKS + Sbjct: 176 VSRLGVTGAREDVSSSTRELLSRVE--TGLPKAVGFGISTGEQAAEVRDAGADAVIVGSAFVKIIDEGKDVNE---RLEALAKELKSGI 259
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_IDILO (Tryptophan synthase alpha chain OS=Idiomarina loihiensis GN=trpA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.895e-11 Identity = 36/89 (40.45%), Postives = 55/89 (61.80%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 535 +S GVTGA + L+ ++KE+ P +GFGIS+PEHVQ+ GADG I GSA+V L+ + + + + +L+ F KS+K+A Sbjct: 177 LSRSGVTGADTQMQAPASELINKLKEAGAPPTLLGFGISQPEHVQRALAAGADGAISGSAVVALIEKNLDNNAQQVADLKAFVKSMKAA 265
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_METAC (Tryptophan synthase alpha chain OS=Methanosarcina acetivorans GN=trpA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.781e-11 Identity = 41/89 (46.07%), Postives = 53/89 (59.55%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS +GVTGARA +SG + LL +K T P AVGFGIS + +V GAD VIVGS V+++ E E +LE A+ LKS + Sbjct: 185 VSRLGVTGARADVSGSTKELLSRVK--TDIPKAVGFGISTGKQAAEVRKAGADAVIVGSVFVRIIEEGNGVNE---KLEALARELKSGI 268
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_METMA (Tryptophan synthase alpha chain OS=Methanosarcina mazei GN=trpA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.938e-11 Identity = 41/89 (46.07%), Postives = 53/89 (59.55%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS +GVTGAR ++G + LL + +T P AVGFGIS E +V GADGVIVGSA V+++ E E LE A+ LKS + Sbjct: 184 VSRLGVTGARDDVAGSTKELLSRV--NTDIPKAVGFGISTGEQAAEVRKAGADGVIVGSAFVRIIEEGTDVNE---RLETLARELKSGM 267
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_CHLSY (Tryptophan synthase alpha chain OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=trpA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.938e-11 Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS GVTGAR +++G++ L+ +++ T P+ VGFGIS+P H+ +VA ADG IVGSA++ L E PE+ + + + L SA+ Sbjct: 177 VSLTGVTGARQTLAGNLTDLIANVRQQTNLPLVVGFGISQPAHIAEVARI-ADGAIVGSALIDRL-ERLPPEDRVSGAAAYIRELLSAV 263
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_CHLAA (Tryptophan synthase alpha chain OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=trpA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.938e-11 Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS GVTGAR +++G++ L+ +++ T P+ VGFGIS+P H+ +VA ADG IVGSA++ L E PE+ + + + L SA+ Sbjct: 177 VSLTGVTGARQTLAGNLTDLIANVRQQTNLPLVVGFGISQPAHIAEVARI-ADGAIVGSALIDRL-ERLPPEDRVSGAAAYIRELLSAV 263
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_METM5 (Tryptophan synthase alpha chain OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=trpA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.449e-11 Identity = 34/89 (38.20%), Postives = 50/89 (56.18%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 +S+ G+TGAR + ++ + + + VGFGISK H + + GADGVIVGSA V ++ EE L +LE+FAK L + Sbjct: 162 ISTFGITGARDTFEQMTFDFIKRARTTCKGKICVGFGISKGSHAESLIEQGADGVIVGSAFVDIIKNYGDSEEALVKLEEFAKELSEGI 250
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_THEP3 (Tryptophan synthase alpha chain OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.423e-11 Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS GVTGAR I ++ ++ + + T P A+GFGIS PE +++ + +DG+IVGSA+V+ + + + E L+E++ F LK L Sbjct: 175 VSITGVTGAREDIETDIEEYMKTVSQYTNMPKAIGFGISTPEMAKKLKDF-SDGIIVGSALVERIAKGYNKSEMLQEVKSFVSILKEVL 262 The following BLAST results are available for this feature:
BLAST of CB304455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304455 ID=CB304455; Name=CB304455; organism=Citrus sinensis; type=EST; length=535bpback to top |