CF831924

Overview
NameCF831924
Unique NameCF831924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1911 contig Csv1_Contig1911:521..1364. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.303e-30
Identity = 85/204 (41.67%), Postives = 116/204 (56.86%), Query Frame = -2
Query:  241 LATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRL-YNFTGNGDQ-DPSLDPRYAAFLKTKCKSLAD-TTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRN-QDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 840
            LA RD+V  +     +  + TGRRDG VS+AA     +        ++   F+ KGL+V DLVVLSG HTIG +HC  F++R   +  GN +  D SLD  YA  L  KC S  D TTT  + DP +   FD+ YY   + +KGLFQ+D+AL+ +   R IV  L N Q+ FF  + +S  +M  M V  G +GEIR+ CS +N
Sbjct:  128 LAARDAV--EALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSLDPTTTVVDNDPETSSTFDNQYYKNLLAHKGLFQTDSALMEDDRTRKIVEILANDQESFFDRWTESFLKMSLMGVRVGEEGEIRRSCSAVN 329          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.702e-30
Identity = 89/204 (43.63%), Postives = 120/204 (58.82%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLL--LPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELR-NQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            ALA RDSV      PD + V  GRRD S++ A++   L  LP PF N S+L  +F ++ L + DLV LSGGHTIG++HC  F++RLY      +QDP+++  +A  LK  C + A+++ T   D  S   FD+ YY   +  +GLF SD  L  +K  R IV     +Q  FF  F  +M +MG M+VLTGTQGEIR  CS  N
Sbjct:  145 ALAARDSVVLS-GGPD-YAVPLGRRD-SLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLY-----PNQDPTMNQFFANSLKRTCPT-ANSSNTQVNDIRSPDVFDNKYYVDLMNRQGLFTSDQDLFVDKRTRGIVESFAIDQQLFFDYFTVAMIKMGQMSVLTGTQGEIRSNCSARN 339          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.903e-30
Identity = 77/202 (38.12%), Postives = 108/202 (53.47%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDKFFPE-FAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            ALATR+ V         + V  GRRDG +S  A     LP P  N ++L   F+  GL+  D++ LSG HTIG +HC   S R+YNF+     DPS++  Y   LK  C    D      +DP S R FD+ Y+    + KGLF SD  L T++ +R+ V    N +  F + F  ++ ++G + VLTG  GEIR+ CS +N
Sbjct:  126 ALATREVVVLTGGPS--YPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQMCPIGVDVRIAINMDPTSPRTFDNAYFKNLQQGKGLFTSDQILFTDQRSRSTVNSFANSEGAFRQAFITAITKLGRVGVLTGNAGEIRRDCSRVN 325          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30
Identity = 75/195 (38.46%), Postives = 106/195 (54.36%), Query Frame = -2
Query:  223 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELR----NQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLL 792
            W+V +GRRD        A+  LP P +    LK  F + GL    DLV LSGGHT G + C F  +RLYNF+ +G  DP+LD  Y + L+ +C    + +   + D  +   FD+ YY    ENKGL QSD  L ++  A + +  +R     Q KFF  F ++M RMG ++  TG QGEIR  C V+N+   ++
Sbjct:  141 WKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCPRNGNLSVLVDFDLRTPTIFDNKYYVNLKENKGLIQSDQELFSSPDASDTIPLVRAYADGQGKFFDAFVEAMIRMGNLSPSTGKQGEIRLNCRVVNSKPKIM 335          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.951e-30
Identity = 82/206 (39.81%), Postives = 106/206 (51.46%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQD-----KFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            ALA RDSV     +   W V TGRRDG VS AA+A  L P+ F +    K+ F  KGL  +DLV L+G HTIG + C    +RL+NF   G  DPS+D  +   L+  C    D +    LD GS   FD+ Y+      +G+ +SD  L T+   +  V             F  EF +SM +M  + V TGT GEIRK CS IN
Sbjct:  128 ALAARDSVVAT--RGLTWSVPTGRRDGRVSRAADAGDL-PAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRALCPQNGDASRRVGLDTGSVNNFDTSYFSNLRNGRGVLESDQKLWTDASTQVFVQRFLGIRGLLGLTFGVEFGRSMVKMSNIEVKTGTNGEIRKVCSAIN 330          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.951e-30
Identity = 78/199 (39.20%), Postives = 107/199 (53.77%), Query Frame = -2
Query:  211 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRN----QDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLLHSSI 792
            W V  GRRD   +    A+  LP+P     ELK  F + GL    DLV LSGGHT G + C F  +RLYNF+  G  DP+L+  Y   L+ +C    + +   + D  +   FD+ YY    E KGL QSD  L ++  A + +  +R+       FF  F ++M RMG +  LTGTQGEIR  C V+N+ +SLLH  +
Sbjct:  126 WRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPRNGNQSVLVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSYADGTQTFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNS-NSLLHDIV 323          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 4.951e-30
Identity = 77/199 (38.69%), Postives = 108/199 (54.27%), Query Frame = -2
Query:  211 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELR----NQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLLHSSI 792
            W V  GRRD   +    A+  LP+PF    +LK +F + GL    DLV LSGGHT G + C F  +RLYNF+  G  DP+L+  Y   L+  C    + +   + D  +   FD+ YY    E KGL QSD  L ++  A + +  +R    +   FF  F ++M RMG +  LTGTQG+IR  C V+N+ +SLLH  +
Sbjct:  147 WRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVVNS-NSLLHDMV 344          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.103e-29
Identity = 76/199 (38.19%), Postives = 107/199 (53.77%), Query Frame = -2
Query:  211 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELR----NQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLLHSSI 792
            W+V  GRRD   +    A+  LP+PF    +LK NF + GL    DLV LSG HT G + C F  +RLYNF+  G  DP+L+  Y   L+ +C    + +   + D  +   FD+ YY    E KGL QSD  L ++  A + +  +R        FF  F ++M RMG +   TGTQG+IR  C V+N+ +SLLH  +
Sbjct:  148 WKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQSVLVDFDLRTPLVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNS-NSLLHDVV 345          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.441e-29
Identity = 77/201 (38.31%), Postives = 110/201 (54.73%), Query Frame = -2
Query:  241 LATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDKFFP-EFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 840
            LATRDSV+        + + TGRRDG VS     D+ LP P  + S     F +KG+   D V L G HT+G  +C  FS+R+ +F G G  DPS+DP     L+  C++ A    TA LD  S  +FD+ ++    + +G+ Q D  L ++   R IV    N + FF  +F ++M +MGA++VLTG  GEIR+ C   N
Sbjct:  121 LATRDSVALAGGPS--YSIPTGRRDGRVS--NNLDVTLPGPTISVSGAVSLFTNKGMNTFDAVALLGAHTVGQGNCGLFSDRITSFQGTGRPDPSMDPALVTSLRNTCRNSA----TAALDQSSPLRFDNQFFKQIRKRRGVLQVDQRLASDPQTRGIVARYANNNAFFKRQFVRAMVKMGAVDVLTGRNGEIRRNCRRFN 313          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.441e-29
Identity = 79/204 (38.73%), Postives = 115/204 (56.37%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT-GNGDQ-DPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            ALA RD+V  +     + E+ TGRRDG  S+AA     +        ++   F+ KGL+++DLVVLSG HTIG SHC  F+ R    + GN +  D SLD  YA  L  KC S   ++ T   DP +   FD+ YY     +KGLFQ+D+AL+ +   R +V EL  +++ FF  +++S  ++  + V  G  GEIR+ CS +N
Sbjct:  125 ALAARDAV--EAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHCNAFNGRFQRDSKGNFEVIDASLDNSYAETLMNKCSSSESSSLTVSNDPETSAVFDNQYYRNLETHKGLFQTDSALMEDNRTRTMVEELASDEESFFQRWSESFVKLSMVGVRVGEDGEIRRSCSSVN 326          
The following BLAST results are available for this feature:
BLAST of CF831924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER18_ARATH1.303e-3041.67Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER12_ARATH1.702e-3043.63Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER45_ARATH2.903e-3038.12Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER2_ARMRU3.791e-3038.46Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PERN1_TOBAC4.951e-3039.81Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER1C_ARMRU4.951e-3039.20Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER1A_ARMRU4.951e-3038.69Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER33_ARATH1.103e-2938.19Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER57_ARATH1.441e-2938.31Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER46_ARATH1.441e-2938.73Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01A09_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831924 ID=CF831924; Name=CF831924; organism=Citrus sinensis; type=EST; length=844bp
TTTTTTTTTTTTTTTTTAACCCAGTCAAATTAATTCCCTTAAAAAGGGAG
CTGGTAGTTATAAACGTACAGCCTATCAATGATACAAATTAAGGCTTCAG
CTGCACAAACACACCCACATCCTTAATTTATTCCGGGGTACAATTATCAA
CAGATCTTAACAAACCCACAAGCCCAGCAGCAGACTAAATTGGCAATTAC
ATTGACATCAGATAGATGAATGCAACAAACTATCTGGATTATTAATAACA
CTGCACTTCTTTCGAATCTCCCCTTGAGTGCCAGTGAGAACATTCATAGC
TCCCATTCTCTTCATTGACTGAGCAAACTCGGGGAAAAACTTATCTTGGT
TTCTCAACTCCATGACAATGTTTCTTGCTCCCTTATTGGTTAAAAGAGCA
GCATCAGATTGGAATAGACCCTTGTTCTCGATAAAAATATCATAGTAATG
GCTGTCGAATTTTCGAAAACTCCCCGGGTCCAATTCGGCAGTAGTCGTTG
TGTCGGCAAGGCTCTTGCATTTGGTTTTTAAGAATGCAGCGTATCGTGGG
TCCAATGAAGGATCTTGATCTCCATTTCCTGTGAAATTGTAAAGCCTGTT
GCTGAAAAAGGTGCAGTGCGAAACTCCGATTGTGTGGCCACCTGAAAGGA
CTACAAGATCTTTGACAGTGAGACCTTTGTCGTTAAAATTTTTCTTGAGT
TCACTGAAGTTGGCAAAAGGTGAAGGAAGCAGCAGATCGGCCTCAGCAGC
TATGGACACACTGCCATCTCTTCTACCGGTGAGCACTTCCCACAGGTCCG
GTTTTTGAAATTGGAATGAAACAGAATCCCTTGTAGCCAATGCT
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