CF831924

Overview
NameCF831924
Unique NameCF831924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1911 contig Csv1_Contig1911:521..1364. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.300e-27
Identity = 77/187 (41.18%), Postives = 97/187 (51.87%), Query Frame = -2
Query:  241 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKG---ARNIVMELRNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 792
            WEV  GRRD   +    A   LPSPF N ++LK+ F+   L   DLV LSG HT G S C FF  RL       + D +L+PRYA  L+  C S  D  T   LDP +  KFD +YY     N G   SD  L +  G    + + +   +Q++FF  F QSM  MG +  LTG QGEIR  C  +N
Sbjct:  112 WEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRL----NVSNPDSTLNPRYAQQLRQACSSGRD--TFVNLDPTTPNKFDKNYYTNLQSNTGPLTSDQVLHSTPGEDTVKIVNLFAASQNQFFESFGQSMINMGNIQPLTGNQGEIRSNCRRLN 292          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.004e-27
Identity = 78/210 (37.14%), Postives = 115/210 (54.76%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDP--RYAAF---LKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMEL----RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            ALA RDSV  +      WEVL GRRD   +  A A+  +P+P ++   L  NF  +GL ++DL+ LSG HTIG + C  F  R+     N +Q   +D   R++ F   L ++CK  +     + LD  +   FD+HY+   +E +GL  SD  L++      I  ++     NQD FF +F +SM +MG +NVLTG +GEIR+ C  +N
Sbjct:  130 ALAARDSVFLR--GGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRIVQ--PNMEQTFYVDEFRRHSTFRRVLGSQCKDSSRDNELSPLDIKTPAYFDNHYFINLLEGRGLLISDNVLVSEDHEGEIFQKVWEYAVNQDLFFIDFVESMLKMGNINVLTGIEGEIRENCRFVN 335          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.923e-27
Identity = 73/201 (36.32%), Postives = 110/201 (54.73%), Query Frame = -2
Query:  241 LATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDKFFP-EFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 840
            LATRD+V F    P  + V TGRRDG VS   +A+ +LP PF +   +   F +KG+ V D V L G HT+G++ C  F +R+ NF G G  DPS+DP  A  L+  C          +  P +   FD+ ++    E KG+   D  + ++     +V++  + ++ F  +FA +M +MGA++VLTG+ GEIR  C   N
Sbjct:  123 LATRDAV-FLGGGPS-YVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLRNTCAVPGGFAALDQSMPVTPVSFDNLFFGQIRERKGILLIDQLIASDPATSGVVLQYASNNELFKRQFAIAMVKMGAVDVLTGSAGEIRTNCRAFN 321          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.124e-27
Identity = 80/207 (38.65%), Postives = 107/207 (51.69%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGN---GDQDPSLDPRYAAFLKTKCKSLADTTT--TAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDKFFPE-FAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            A A RDS+S        ++V  GRRDG VS A E  + LP P +    L   F  K L+V+D+VVLSG HT+G S C  F  R++N + N      D  L P YA  L+  C S    TT  T  +DPG+    D++YY +     GLF SD  L  N     +V    + +  + E FA +M +MG + V TGT GE+R  C V+N
Sbjct:  136 AFAARDSISLTGSVS--YQVPAGRRDGRVSNATET-VDLPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCPSNTTQTTPITTAMDPGTPNVLDNNYYKLLPRGMGLFFSDNQLRVNPQMAALVSSFASNETLWKEKFAAAMVKMGRIQVQTGTCGEVRLNCGVVN 339          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.124e-27
Identity = 79/201 (39.30%), Postives = 105/201 (52.24%), Query Frame = -2
Query:  253 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAF--LKTKCKSL-ADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKC 843
            ALA R++V         W V  GRRD   +    A+  LPSPF     +   F   GL +KD+VVLSG HTIG + C    +RL+NF G+G  DP+L    A    LK  C ++ +  +  A LD  S  KFD+ YY   + N GL  SD  L+T+  A  +V     N   F  +FA SM +MG + V+TG+ G IR KC
Sbjct:  148 ALAAREAVVLT--GGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSALLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYYVNLMNNIGLLDSDQTLMTDPTAAALVKSYSENPYLFSRDFAVSMVKMGNIGVMTGSDGVIRGKC 346          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 6.692e-27
Identity = 74/206 (35.92%), Postives = 104/206 (50.49%), Query Frame = -2
Query:  241 LATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKC-----KSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 840
            LATRD+V         + V TGRRDG  S     DL  PSP  ++ +    F  +GL V D+  L G H++G +HC++  +RLYN+   G   P+++  + + +  +C     K   D       D GS   F S +Y   + NK + + D  LL N   + I  E     + F   FA SM +MGA+NVLT T+GEIRK C  IN
Sbjct:  134 LATRDAV--HLAGAPSYPVFTGRRDGLTSDKQTVDL--PSPSISWDQAMSYFKSRGLNVLDMATLLGSHSMGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAKQCPPRTRKGQTDPLVYLNPDSGSNHSFTSSFYSRILSNKSVLEVDQQLLYNDDTKQISKEFSEGFEDFRKSFALSMSKMGAINVLTKTEGEIRKDCRHIN 335          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.321e-26
Identity = 74/202 (36.63%), Postives = 102/202 (50.50%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVME-LRNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            ALATRD V     K   + V  GR DG VS AA  +  LP P    +EL K F    LT +D++ LS  HT+G +HC    NR+YNF      DP+L+  YA  L+  C    D      +DP + R+FD+ Y+    + KGLF SD  L T+  ++  V +  +N   F   F  +M ++G + V T   G IR+ C   N
Sbjct:  130 ALATRDVVVAA--KGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTVDPRIAINMDPTTPRQFDNIYFKNLQQGKGLFTSDQVLFTDGRSKPTVNDWAKNSVAFNKAFVTAMTKLGRVGVKTRRNGNIRRDCGAFN 329          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.321e-26
Identity = 69/186 (37.10%), Postives = 104/186 (55.91%), Query Frame = -2
Query:  241 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKC-KSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIV-MELRNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 792
            +E+  GRRD   S ++    LLP P    S+L   F+ +G +V+++V LSG HTIG SHC  F+NR+     N +     +PR+A  LK  C  S  D T +   D  +  KFD+ Y+    +  GL +SD  L ++   R  V +  R+Q +FF +FA +M+++    VLTG +GEIR++C  IN
Sbjct:  148 YEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRV-----NPNNSTGYNPRFAVALKKACSNSKNDPTISVFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDAIN 328          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.338e-26
Identity = 73/203 (35.96%), Postives = 111/203 (54.68%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALL-TNKGARNIVMEL-RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            A+A RD+   ++     ++V  GRRD + +  A AD  LP+  A+ ++L + F  KGL  +DLV LSG HT+G + C  F  RLY      D    +D  +++  K +C      TT A LD  +   FD++YY   ++ KGL +SD  L  T     +IV E  RN  +F  +F+ +M +MG +  LTG+ G+IR+ CS +N
Sbjct:  121 AVAARDAS--EYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCLTFKGRLY------DNSSDIDAGFSSTRKRRCPVNGGDTTLAPLDQVTPNSFDNNYYRNLMQKKGLLESDQVLFGTGASTDSIVTEYSRNPSRFASDFSAAMIKMGDIQTLTGSDGQIRRICSAVN 315          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.399e-26
Identity = 75/206 (36.41%), Postives = 116/206 (56.31%), Query Frame = -2
Query:  238 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHC-TFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTT--TTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDKFFPE-FAQSMKRMGAMNVLTGTQGEIRKKCSVINN 843
            A A RD+  F  Q    +++ +GR DG+ S A+E+   L  P +N S+L  +F  KG++++DLVVLSG HT+G SHC +F S+RL       D    ++P  AAFL+T+C     T+   T   D  +    D  YY   + +  LF SDAALLT+     +V++      ++ + F ++M +M ++ V TG QG++RK C  IN+
Sbjct:  136 AFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSFVSDRL-------DVPSDINPALAAFLRTRCPPNTTTSDDPTVMQDVVTPNAMDIQYYKNVLSHTVLFTSDAALLTSPETAKLVLDNAKIPGWWEDKFEKAMVKMASLEVKTGHQGQVRKNCRAINH 334          
The following BLAST results are available for this feature:
BLAST of CF831924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER2_CUCSA2.300e-2741.18Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER20_ARATH3.004e-2737.14Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER28_ARATH3.923e-2736.32Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER1_MAIZE5.124e-2738.65Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER10_ARATH5.124e-2739.30Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER26_ARATH6.692e-2735.92Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER73_ARATH3.321e-2636.63Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER63_ARATH3.321e-2637.10Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER4_ARATH4.338e-2635.96Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER2_MAIZE7.399e-2636.41Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01A09_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831924 ID=CF831924; Name=CF831924; organism=Citrus sinensis; type=EST; length=844bp
TTTTTTTTTTTTTTTTTAACCCAGTCAAATTAATTCCCTTAAAAAGGGAG
CTGGTAGTTATAAACGTACAGCCTATCAATGATACAAATTAAGGCTTCAG
CTGCACAAACACACCCACATCCTTAATTTATTCCGGGGTACAATTATCAA
CAGATCTTAACAAACCCACAAGCCCAGCAGCAGACTAAATTGGCAATTAC
ATTGACATCAGATAGATGAATGCAACAAACTATCTGGATTATTAATAACA
CTGCACTTCTTTCGAATCTCCCCTTGAGTGCCAGTGAGAACATTCATAGC
TCCCATTCTCTTCATTGACTGAGCAAACTCGGGGAAAAACTTATCTTGGT
TTCTCAACTCCATGACAATGTTTCTTGCTCCCTTATTGGTTAAAAGAGCA
GCATCAGATTGGAATAGACCCTTGTTCTCGATAAAAATATCATAGTAATG
GCTGTCGAATTTTCGAAAACTCCCCGGGTCCAATTCGGCAGTAGTCGTTG
TGTCGGCAAGGCTCTTGCATTTGGTTTTTAAGAATGCAGCGTATCGTGGG
TCCAATGAAGGATCTTGATCTCCATTTCCTGTGAAATTGTAAAGCCTGTT
GCTGAAAAAGGTGCAGTGCGAAACTCCGATTGTGTGGCCACCTGAAAGGA
CTACAAGATCTTTGACAGTGAGACCTTTGTCGTTAAAATTTTTCTTGAGT
TCACTGAAGTTGGCAAAAGGTGAAGGAAGCAGCAGATCGGCCTCAGCAGC
TATGGACACACTGCCATCTCTTCTACCGGTGAGCACTTCCCACAGGTCCG
GTTTTTGAAATTGGAATGAAACAGAATCCCTTGTAGCCAATGCT
back to top