CF831925

Overview
NameCF831925
Unique NameCF831925
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1911 contig Csv1_Contig1911:289..1066. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831925 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.285e-31
Identity = 85/260 (32.69%), Postives = 134/260 (51.54%), Query Frame = 3
Query:   15 INPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNK-AERDAVPNLSLGGFEVINEIKSELESSCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDG-SVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAEL----DPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFTEFAQSMKRM 773
            ++P  PA L+R+ FHDC V+GCDAS+L+      +  E D+  N  +   +++  IK+ LE  CP  VSC+D++ LA RD+V+       L  V  GR+D  S      AD  LP   A+       F +KG+T+++ V + G HTIGV+HC   +N L  F        ++DPR+  FL+  C   + T+  AE     +  +   FD+ YYD  I  +G  + D+ +  +   R  V     +QD+FF  F+ +  ++
Sbjct:   64 LDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVA--LTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHC---NNVLSRFDNANATSENMDPRFQTFLRVACPEFSPTSQAAEATFVPNDQTSVIFDTAYYDDAIAGRGNLRIDSEIGADPRTRPFVEAFAADQDRFFNAFSSAFVKL 318          
BLAST of CF831925 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.898e-31
Identity = 79/239 (33.05%), Postives = 123/239 (51.46%), Query Frame = 3
Query:   42 IRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESSCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLA---DTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTE 749
            +R  FHDC V+ CDAS+L+ +  G ++E+ +  +  +  F+ +  IK  LE  CP  VSCADIVAL+ RD +    + P +  + TGRRD   S   + + L+P+   + S +   FN  G+ V+  V L G H++G  HC    +RLY        DP+LDP YA +LK +C S     +    +  D  +    D+ YY  ++ +KGL   D  L T+      V ++   + +F E
Sbjct:   65 LRNLFHDCVVKSCDASLLLETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGI-VMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTI-----DPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHE 297          
BLAST of CF831925 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.481e-30
Identity = 89/252 (35.32%), Postives = 132/252 (52.38%), Query Frame = 3
Query:   33 AKLIRMHFHDCFVRGCDASVLINSTAGN-KAERDAVPNL-SLGGFEVINEIKSELESSCPGI-VSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQ-DKFFTEFAQSMKRMG 776
            A LIR+HFHDCFV GCD  +L++   G    E+++ PN  S  G+EVI + K  +  +CP I VSCADI+A+A RDSV+    +   + V  GR D   +    A   LP+PF N +   + FNDK  T++++V L+G HT+G + C+           +G+ +P      AA L+  C +    +   +LD  +   FD  YYD L  N+G+  SD  L  +      V +  N    F  +FA +M +MG
Sbjct:  101 ASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQT--YNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFARCS-------TVCTSGNVNP------AAQLQCNCSATLTDSDLQQLDT-TPTMFDKVYYDNLNNNQGIMFSDQVLTGDATTAGFVTDYSNDVSVFLGDFAAAMIKMG 336          
BLAST of CF831925 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.526e-30
Identity = 84/246 (34.15%), Postives = 129/246 (52.44%), Query Frame = 3
Query:   42 IRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESSCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKC-KSLADTTTTAEL--DPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFTEFAQSMK 767
            +R  FHDC V  CDAS+L++ST     E++   +  L  F  I EIK  LE  CPG+VSC+DI+ L+ R+ +  +        + TGRRDG  S     +  LP    + S + + F   G+    LV L G H++G +HC    +RLY      + DPSL+P +   +  KC  S+ D      +  D G+    D++YY  +++NKGL   D  L  +K  R IV ++ ++Q  FF EF ++++
Sbjct:   66 LRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGI--EAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKEFTRAIQ 304          
BLAST of CF831925 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.300e-30
Identity = 91/252 (36.11%), Postives = 133/252 (52.78%), Query Frame = 3
Query:   33 AKLIRMHFHDCFVRGCDASVLINSTAGN-KAERDAVPNL-SLGGFEVINEIKSELESSCPGI-VSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTE-FAQSMKRMG 776
            A LIR+HFHDCFV GCD  +L++   G    E+++ PN  S+ GFEVI + K  +  SCP I VSCADI+A+A RDS++    +   + V  GR D + +  + A   LP+P  N +   + F+DK  TV+++V L+G HT+G + C+           +G+ +P      AA L+  C +    +   +LD  +   FD  YYD L  N+G+  SD  L  N      V    N    F E FA +M +MG
Sbjct:  101 ASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQT--YTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFARCS-------TVCTSGNVNP------AAQLQCNCSATLTDSDLQQLDT-TPAVFDKVYYDNLNNNQGIMFSDQVLTGNTTTAGFVTTYSNNVTVFLEDFAAAMIKMG 336          
BLAST of CF831925 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.309e-30
Identity = 87/252 (34.52%), Postives = 135/252 (53.57%), Query Frame = 3
Query:   33 AKLIRMHFHDCFVRGCDASVLINSTAGN-KAERDAVPNL-SLGGFEVINEIKSELESSCPGI-VSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQ-DKFFTEFAQSMKRMG 776
            A LIR+HFHDCFV GCD  +L++   G    E+++ PN  S  G+EVI + K  + ++CP + VSCADI+A+A RDSV+    +   + V  GR D   +  + A   LP+PF N +   + F+DK  T++++V L+G HT+G + C+           +G+ +P      AA L+  C +    +   +LD  +   FD  YYD L  N+G+  SD  L  +      V +  N  + F  +FA +M +MG
Sbjct:  102 ASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQT--YSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFARCS-------TVCTSGNVNP------AAQLQCNCSATLTDSDLQQLDT-TPTMFDKVYYDNLNSNQGIMFSDQVLTGDATTAGFVTDYSNDVNVFLGDFAAAMIKMG 337          
BLAST of CF831925 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.935e-27
Identity = 85/260 (32.69%), Postives = 125/260 (48.08%), Query Frame = 3
Query:    9 AAINPD--LPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAV-PNLSLGGFEVINEIKSELESSCPGI-VSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRN-QDKFFTEFAQSMKRM 773
            AAIN +  + A LIR+ FHDCFV GCDA +L+N TA    E+ A   N S+ GF VI + K  +++  P + VSCADI+++A RD  SF+      + V  GR+D   +    A+  L  P  N +     F  KG    ++V L G HTIG + C       +           ++P   + L   C    + T    LDP +   +D  Y+  ++ ++GL  SD  LL        V   R+    F T+FA +M +M
Sbjct:   81 AAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARD--SFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGTEMVALLGSHTIGFARCPLLCISTF-----------INPARVSTLNCNCSGTVNATGLVGLDP-TPTTWDQRYFSDVVNDQGLLFSDNELLKGNTTNAAVRRYRDAMGAFLTDFAAAMVKM 326          
BLAST of CF831925 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.028e-23
Identity = 69/146 (47.26%), Postives = 88/146 (60.27%), Query Frame = 3
Query:   27 LPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSL--GGFEVINEIKSELESSCPG-IVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLL--LPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTI 449
            L A L+R+HFHDCFV+GCDASVL++ +A    E+ A PNL+L    F+ IN+I   L   C G +VSC+D++ALA RDSV         ++V  GRRD S S A + D+L  LP P A    L    +   L   DLV LSGGHTI
Sbjct:   71 LAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSV--VVSGGPSYKVPLGRRD-SASFATQQDVLSGLPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
BLAST of CF831925 vs. ExPASy Swiss-Prot
Match: PERX_LUPPO (Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.699e-18
Identity = 55/144 (38.19%), Postives = 79/144 (54.86%), Query Frame = 3
Query:  351 PSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCK-SLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMEL--RNQDKFFTEFAQSMKRM 773
            P P ++ + L   F  KGLT  DL VLSGGHTIG S C FF  R+YN       D ++D  +A   +  C  S    T  A LD  +  +FD++YY  L+ N+GL  SD  L  N G+++ ++     N  KFF++FA ++ +M
Sbjct:    2 PGPSSDLTTLTTKFAAKGLTPSDLTVLSGGHTIGQSECQFFKTRIYN-------DTNIDTNFATSRQANCPFSAGGETNLAPLDSLTPNRFDNNYYKDLVSNRGLLHSDQVLF-NGGSQDTLVRTYSTNNVKFFSDFAAAIVKM 137          
BLAST of CF831925 vs. ExPASy Swiss-Prot
Match: PER2_HORVU (Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.998e-15
Identity = 51/136 (37.50%), Postives = 73/136 (53.68%), Query Frame = 3
Query:  372 SELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCK-SLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELR-NQDKFFTEFAQSMKRM 773
            S L  +F ++ L V DLV LSG HT GV+HC  F +R      N    P++D ++A  L+ KC       T T +LD  +   FD+ YY  LI  +GLF+SD  L+ +   + +      NQ  FF +FA+SM +M
Sbjct:    1 STLISSFANRSLDVADLVSLSGAHTFGVAHCPAFEDRSSRVRHN----PAIDGKFATALRNKCSGDNPSGTLTQKLDVRTPDVFDNKYYFDLIARQGLFKSDQGLIDHPTTKRMATRFSLNQGAFFEQFARSMTKM 132          
The following BLAST results are available for this feature:
BLAST of CF831925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER29_ARATH2.285e-3132.69Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER21_ARATH3.898e-3133.05Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PERX_SOLTU1.481e-3035.32Suberization-associated anionic peroxidase OS=Sola... [more]
PER42_ARATH2.526e-3034.15Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER2_SOLLC3.300e-3036.11Suberization-associated anionic peroxidase 2 OS=So... [more]
PER1_SOLLC4.309e-3034.52Suberization-associated anionic peroxidase 1 OS=So... [more]
PERA_IPOBA9.935e-2732.69Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER1_SORBI1.028e-2347.26Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PERX_LUPPO1.699e-1838.19Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 ... [more]
PER2_HORVU2.998e-1537.50Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01A09_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831925 ID=CF831925; Name=CF831925; organism=Citrus sinensis; type=EST; length=778bp
GGAAAAATGCCGCCATTAACCCTGACTTGCCGGCCAAGCTTATCAGAATG
CATTTCCATGACTGCTTTGTTAGGGGTTGCGATGCGTCGGTTTTGATAAA
CTCAACTGCAGGTAACAAAGCAGAGAGGGATGCAGTTCCGAATCTATCTT
TGGGAGGTTTCGAAGTTATTAATGAGATTAAATCGGAGCTCGAGAGCAGT
TGTCCAGGAATTGTTTCTTGTGCCGATATCGTAGCATTGGCTACAAGGGA
TTCTGTTTCATTCCAATTTCAAAAACCGGACCTGTGGGAAGTGCTCACCG
GTAGAAGAGATGGCAGTGTGTCCATAGCTGCTGAGGCCGATCTGCTGCTT
CCTTCACCTTTTGCCAACTTCAGTGAACTCAAGAAAAATTTTAACGACAA
AGGTCTCACTGTCAAAGATCTTGTAGTCCTTTCAGGTGGCCACACAATCG
GAGTTTCGCACTGCACCTTCTTCAGCAACAGGCTCTACAATTTCACAGGA
AATGGAGATCAAGATCCTTCATTGGACCCACGATACGCTGCATTCTTAAA
AACCAAATGCAAGAGCCTTGCCGACACAACGACTACTGCCGAATTGGACC
CGGGGAGTTTTCGAAAATTCGACAGCCATTACTATGATATTCTTATCGAG
AACAAGGGTCTATTCCAATCTGATGCTGCTCTTTTAACCAATAAGGGAGC
AAGAAACATTGTCATGGAGTTGAGAAACCAAGATAAGTTCTTCACCGAGT
TTGCTCAGTCAATGAAGAGAATGGGAGC
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