CF831926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_ODOSI (ATP synthase gamma chain, chloroplastic OS=Odontella sinensis GN=ATPC PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.375e-23 Identity = 57/113 (50.44%), Postives = 77/113 (68.14%), Query Frame = -1 Query: 234 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEAL 569 DE+F+LT + G V R + + + P M+FEQDP QI+++++PLY+N QILR QES ASE+AARM M +DNA +L K LS YN+ RQ +T E+LEIV+GA AL Sbjct: 257 DEVFQLTSSGGDFEVERTELEVAEPQDFPNDMIFEQDPIQIINSILPLYLNGQILRTLQESVASELAARMQSMQSASDNAGDLAKRLSTEYNRARQAAVTQEILEIVSGASAL 369
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PROM4 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9211) GN=atpG PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.094e-22 Identity = 52/112 (46.43%), Postives = 80/112 (71.43%), Query Frame = -1 Query: 237 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEA 569 DE+FRLT +++V +D+ N+ P ++FEQ P Q+L+A++PLY+ +Q+LRA QES ASE+A+RM+ M+ +DNA EL K L++ YN+ RQ IT E+LE+V G+ + Sbjct: 205 DEMFRLTTKNSRLVVEKDAAPSNEQPKLPSDVVFEQSPDQLLNALLPLYLQNQLLRALQESAASELASRMTAMNNASDNAKELAKTLNLTYNKARQAAITQEILEVVGGSSS 316
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PROMP (ATP synthase gamma chain OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=atpG PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.866e-22 Identity = 52/110 (47.27%), Postives = 77/110 (70.00%), Query Frame = -1 Query: 243 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGA 569 DE+FRLT K++V + ++ N + P ++FEQ P Q+LD+++PLY+ +QILRA QES ASE+A RM+ M+ +DNA EL L++ YN+ RQ IT E+LE+V G+ Sbjct: 205 DEIFRLTTKNSKLLVEKSNIEKNDSDKLPSDIVFEQSPDQLLDSLLPLYLQNQILRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PROM5 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9515) GN=atpG PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.866e-22 Identity = 52/110 (47.27%), Postives = 78/110 (70.91%), Query Frame = -1 Query: 243 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGA 569 DE+FRLT K++V + ++ N+ + P ++FEQ P Q+LD+++PLY+ +QILRA QES ASE+A RM+ M+ +DNA EL L++ YN+ RQ IT E+LE+V G+ Sbjct: 205 DEIFRLTTKNSKLLVEKSNLEKNESDRLPSDIVFEQSPDQLLDSLLPLYLQNQILRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PROMS (ATP synthase gamma chain OS=Prochlorococcus marinus (strain AS9601) GN=atpG PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.437e-22 Identity = 51/110 (46.36%), Postives = 78/110 (70.91%), Query Frame = -1 Query: 243 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGA 569 DE+FRLT + K++V + ++ + E P ++FEQ P Q+LD+++PLY+ +Q+LRA QES ASE+A RM+ M+ +DNA EL L++ YN+ RQ IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PROM9 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9312) GN=atpG PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.437e-22 Identity = 51/110 (46.36%), Postives = 78/110 (70.91%), Query Frame = -1 Query: 243 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGA 569 DE+FRLT + K++V + ++ + E P ++FEQ P Q+LD+++PLY+ +Q+LRA QES ASE+A RM+ M+ +DNA EL L++ YN+ RQ IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PROM2 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9215) GN=atpG PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.437e-22 Identity = 51/110 (46.36%), Postives = 78/110 (70.91%), Query Frame = -1 Query: 243 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGA 569 DE+FRLT + K++V + ++ + E P ++FEQ P Q+LD+++PLY+ +Q+LRA QES ASE+A RM+ M+ +DNA EL L++ YN+ RQ IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PROM0 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9301) GN=atpG PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.437e-22 Identity = 51/110 (46.36%), Postives = 78/110 (70.91%), Query Frame = -1 Query: 243 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGA 569 DE+FRLT + K++V + ++ + E P ++FEQ P Q+LD+++PLY+ +Q+LRA QES ASE+A RM+ M+ +DNA EL L++ YN+ RQ IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_SYNS3 (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9311) GN=atpG PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.156e-22 Identity = 54/112 (48.21%), Postives = 78/112 (69.64%), Query Frame = -1 Query: 237 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEA 569 DE+FRLT EG++ V S N P ++FEQ P Q+L+A++PLY+ +Q+LR+ QES ASE+A+RM+ M+ +DNA EL K L++ YN+ RQ IT E+LE+V G+ A Sbjct: 203 DEIFRLTTKEGRLSVEAGSAPENSQPALPSDIVFEQSPDQLLNALLPLYLQNQLLRSLQESAASELASRMTAMNNASDNAKELAKTLTLDYNKARQAAITQEILEVVGGSAA 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_SYNPW (ATP synthase gamma chain OS=Synechococcus sp. (strain WH7803) GN=atpG PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.579e-21 Identity = 53/113 (46.90%), Postives = 79/113 (69.91%), Query Frame = -1 Query: 234 DELFRLTPNEGKMIVARDSVTFN-KGELSPLMLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEAL 569 DE+FRLT +G + V S N + ELS ++FEQ P Q+L+A++PLY+ +Q+LR+ QE+ ASE+A+RM+ M+ +DNA L K L++ YN+ RQ IT E+LE+ GA A+ Sbjct: 203 DEIFRLTTKDGDLRVETGSAPANAQPELSSEIVFEQSPDQLLNALLPLYLQNQVLRSLQEAAASELASRMTAMNNASDNAKALAKTLTLDYNKARQAAITQEILEVAGGAAAV 315 The following BLAST results are available for this feature:
BLAST of CF831926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 412
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831926 ID=CF831926; Name=CF831926; organism=Citrus sinensis; type=EST; length=569bpback to top |