CF831927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_CYAA5 (ATP synthase gamma chain OS=Cyanothece sp. (strain ATCC 51142) GN=atpG PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 3.231e-14 Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 3 Query: 24 TIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 T EGK+ VER T +F+Q P QILDA++PLY+N Q+LRAL+E+ A+E A+RM+AM Sbjct: 210 TREGKLQVERETVTQTMSSFPQDMIFEQDPVQILDALLPLYINNQLLRALQEAAASELAARMTAM 274 HSP 2 Score: 35.8094 bits (81), Expect = 3.231e-14 Identity = 17/27 (62.96%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 260 LSLAYNQERQAKITGELLEIVAGA*AL 340 L+L+YN+ RQA IT +L+E+VAGA AL Sbjct: 288 LTLSYNKARQAAITQQLMEVVAGANAL 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP7 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 7424) GN=atpG PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 3.231e-14 Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 3 Query: 33 GKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 GK VER + + +F+Q P QILD+++PLY+N Q+LRAL+ES A+E A+RM+AM Sbjct: 213 GKFQVEREKVSASVSSFPQDMIFEQDPVQILDSLLPLYLNNQLLRALQESAASELAARMTAM 274 HSP 2 Score: 40.0466 bits (92), Expect = 3.231e-14 Identity = 20/29 (68.97%), Postives = 24/29 (82.76%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA*AL 340 K LSL+YN+ RQA IT E+LE+VAGA AL Sbjct: 286 KTLSLSYNKARQAAITQEILEVVAGANAL 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_SYNP1 (ATP synthase gamma chain OS=Synechococcus sp. (strain PCC 6716) GN=atpG PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 9.206e-14 Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT + V R T N L P +F+Q P QILDA++PLY++ Q+LRAL+E+ A+E A+RM+AM Sbjct: 209 TTRASHLEVNREKVTSNLPALPPDMIFEQDPVQILDALLPLYLSNQLLRALQEAAASELAARMTAM 274 HSP 2 Score: 36.965 bits (84), Expect = 9.206e-14 Identity = 18/27 (66.67%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 260 LSLAYNQERQAKITGELLEIVAGA*AL 340 L+L+YN+ RQA IT E+LE+VAGA AL Sbjct: 288 LTLSYNKARQAAITQEILEVVAGAEAL 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_MICAN (ATP synthase gamma chain OS=Microcystis aeruginosa (strain NIES-843) GN=atpG PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.554e-13 Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 24 TIEGKMIVERPNETFNKGELSPLKL-FDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 T EGK V+R ++ P + F+Q P QILD+++PLY+N Q+LRAL+ES A+E A+RM+AM Sbjct: 210 TKEGKFKVQREKMASQPAQVFPQDMIFEQNPVQILDSLLPLYLNNQLLRALQESAASELAARMTAM 275 HSP 2 Score: 36.1946 bits (82), Expect = 1.554e-13 Identity = 19/27 (70.37%), Postives = 21/27 (77.78%), Query Frame = 2 Query: 260 LSLAYNQERQAKITGELLEIVAGA*AL 340 LS YN+ RQA IT ELLE+VAGA AL Sbjct: 289 LSRTYNKARQAAITQELLEVVAGANAL 315
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_SYNJA (ATP synthase gamma chain OS=Synechococcus sp. (strain JA-3-3Ab) GN=atpG PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 2.018e-13 Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 3 Query: 33 GKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 G+ VER P +F+Q P QILDA++PLY+N Q+LRAL+E+ A+E A+RM+AM Sbjct: 213 GEFTVERSKIVAAVSAPPPDMIFEQDPVQILDALLPLYLNNQLLRALQEAAASELAARMTAM 274 HSP 2 Score: 38.5058 bits (88), Expect = 2.018e-13 Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA*AL 340 + L LAYN+ RQA IT E+LE+VAGA AL Sbjct: 286 RTLGLAYNKARQAAITQEILEVVAGAEAL 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_SYNP6 (ATP synthase gamma chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpG PE=3 SV=2) HSP 1 Score: 58.9214 bits (141), Expect = 2.621e-13 Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT G VER T L +F+Q PAQIL A++PLY++ Q+LRAL+E+ A+E A+RM+AM Sbjct: 209 TTRGGSFTVEREKLTSEVAPLPRDMIFEQDPAQILSALLPLYLSNQLLRALQEAAASELAARMTAM 274 HSP 2 Score: 37.3502 bits (85), Expect = 2.621e-13 Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = 2 Query: 260 LSLAYNQERQAKITGELLEIVAGA*AL 340 L+L YN+ RQA IT ELLE+VAGA AL Sbjct: 288 LTLVYNKARQAAITQELLEVVAGAEAL 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_SYNE7 (ATP synthase gamma chain OS=Synechococcus elongatus (strain PCC 7942) GN=atpG PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 2.621e-13 Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT G VER T L +F+Q PAQIL A++PLY++ Q+LRAL+E+ A+E A+RM+AM Sbjct: 209 TTRGGSFTVEREKLTSEVAPLPRDMIFEQDPAQILSALLPLYLSNQLLRALQEAAASELAARMTAM 274 HSP 2 Score: 37.3502 bits (85), Expect = 2.621e-13 Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = 2 Query: 260 LSLAYNQERQAKITGELLEIVAGA*AL 340 L+L YN+ RQA IT ELLE+VAGA AL Sbjct: 288 LTLVYNKARQAAITQELLEVVAGAEAL 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_SYNR3 (ATP synthase gamma chain OS=Synechococcus sp. (strain RCC307) GN=atpG PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 2.621e-13 Identity = 30/65 (46.15%), Postives = 48/65 (73.85%), Query Frame = 3 Query: 24 TIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 T EG++ VER + + + +L +F+Q P+Q+LD ++PLY+ Q+LR+L+ES A+E ASRM+AM Sbjct: 210 TKEGELGVERSSASNQEDKLKSDLVFEQSPSQLLDVLLPLYLQNQVLRSLQESAASELASRMTAM 274 HSP 2 Score: 35.4242 bits (80), Expect = 2.621e-13 Identity = 17/29 (58.62%), Postives = 22/29 (75.86%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA*AL 340 K L+L YN+ RQA IT E+LE+V GA A+ Sbjct: 286 KELTLDYNKARQAAITQEILEVVGGASAM 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP4 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=atpG PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 2.621e-13 Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT G+ V+R + + +F+Q P QILDA++PLY+N Q+LRAL+ES A+E A+RM+AM Sbjct: 209 TTRGGRFEVQREKVSSATQSMPQDMIFEQDPLQILDALLPLYLNNQLLRALQESAASELAARMTAM 274 HSP 2 Score: 37.3502 bits (85), Expect = 2.621e-13 Identity = 18/29 (62.07%), Postives = 22/29 (75.86%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA*AL 340 K LS+ YN+ RQA IT E+LE+V GA AL Sbjct: 286 KGLSMTYNKARQAAITQEILEVVGGAEAL 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_ACAM1 (ATP synthase gamma chain OS=Acaryochloris marina (strain MBIC 11017) GN=atpG PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 3.404e-13 Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 3 Query: 21 TTIEGKMIVERPN-ETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT G+ VER E E+ +F+Q P QILDA++PLY+N Q+LRAL+ES A+E A+RM+AM Sbjct: 210 TTRGGQFQVERERMERGTPQEMPSDMIFEQNPIQILDALLPLYLNNQLLRALQESAASELAARMTAM 276 HSP 2 Score: 36.1946 bits (82), Expect = 3.404e-13 Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 2 Query: 260 LSLAYNQERQAKITGELLEIVAGA*AL 340 L+L+YN+ RQA IT ELLE+V GA AL Sbjct: 290 LTLSYNKARQAAITQELLEVVGGAEAL 316 The following BLAST results are available for this feature:
BLAST of CF831927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831927 ID=CF831927; Name=CF831927; organism=Citrus sinensis; type=EST; length=502bpback to top |