CF831931
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 2.078e-41 Identity = 76/144 (52.78%), Postives = 103/144 (71.53%), Query Frame = -2 Query: 268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 699 +I VT TNFCPPN L GGWCN HFDM++PA+ I Y AGIVPI ++++ C + GG+RFT+ G +YF LVL+TN+ G+G + S+S+KGS TGW MSRNWG NWQ + L GQ+LSF +T++ G+T+ ++VVP W Sbjct: 94 AITVTGTNFCPPNYDLPY--GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGW 235
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.898e-41 Identity = 74/144 (51.39%), Postives = 104/144 (72.22%), Query Frame = -2 Query: 268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 699 S++VTAT+FCPPN LS+D GGWCN P +H +++ AF IA+ RA ++PI +RR+ C ++GG+RF+++G S+F VLI+NVG G+V V +KG T W M+RNWGQNW S+ L GQSLSF++T G+T+ S +V P W Sbjct: 100 SVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYW 243
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.031e-40 Identity = 73/144 (50.69%), Postives = 103/144 (71.53%), Query Frame = -2 Query: 268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 699 +I VT TN+CPPN L GGWCN HFDM++PA+ I Y AGI+PI ++++ C + GG+RFT+NG +YF LVL+TN+ G+G + S+S+KGS TGW M+RNWG NWQ + L GQ+LSF +T++ G+T+ ++ VP W Sbjct: 94 AITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGW 235
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.298e-40 Identity = 77/146 (52.74%), Postives = 104/146 (71.23%), Query Frame = -2 Query: 268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQY-RAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 699 ++ VTATNFCP +N+N GWCN P HFDM+ PAF +IA+ GIVP+ +RR+ C ++GG+RFT+ G FN+V+I+NVGG G V SV+++GSK W M+RNWG NWQS+ L GQ LSF++T +D +T T NVVP +W Sbjct: 98 AVTVTATNFCP-----TNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSW 238
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.151e-38 Identity = 73/148 (49.32%), Postives = 105/148 (70.95%), Query Frame = -2 Query: 268 SIIVTATNFCPPNLALSNDNGG--WCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIK-GSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTA-SDGRTVTSNNVVPGNW 699 +I VTATN CPPN A D GG WCNPP HFD+++PAF+++A +RAGIVP+ +RR+PCA+ GG+RF + G+ Y+ L + NV GAGDV + +K G GW MS NWG ++Q+ + L GQ+LSF++T+ + G+T+ + V P +W Sbjct: 106 AITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASW 253
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 155.221 bits (391), Expect = 3.106e-37 Identity = 73/145 (50.34%), Postives = 98/145 (67.59%), Query Frame = -2 Query: 268 GSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 702 GSI +TAT+ CPP A WC P +HFD++ P F++IAQ +A +VP+ +RR+PCAK GG++F V G+ +L NVGGAGD+ +VS KGSKT W MSR WGQNW +N L GQS+S ++T SDG T +V+P +W Sbjct: 113 GSIKITATDLCPPGSA-------WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASW 250
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.958e-35 Identity = 67/144 (46.53%), Postives = 97/144 (67.36%), Query Frame = -2 Query: 268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 699 +I VT TN+ GGWCN +FDM++PA+ I Y AGIVPI ++++ C + GG+RF +NG +YF LVL+TN+ G+G + S+S+KGS TGW M+RNWG NWQ + L GQ+LSF +T++ G+T+ ++ VP W Sbjct: 94 AITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGW 226
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.461e-34 Identity = 69/149 (46.31%), Postives = 100/149 (67.11%), Query Frame = -2 Query: 268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG--WQAMSRNWGQNWQSNSYL-NGQSLSFQLT--ASDGRTVTSNNVVPGNW 699 S+++T TN CPPN L ND+GGWCNPP HFDMA P+FL++AQ AGIVP+ +RR+PC + GG+RF + G+ Y+ L+ + NVGGAGDV S+S+K S G W + NWG +Q + L N L+ +LT ++ +T+ ++ + W Sbjct: 123 SVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYSTPQQTIIVSDAISPWW 271
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30 Identity = 60/145 (41.38%), Postives = 97/145 (66.90%), Query Frame = -2 Query: 268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 699 +++VTATN PP + N G +HFD+ PAFL IA+ + G+VP+S+R++ C ++GGI++T+ G+ +N+V++ NVGGAGDV +++KG+K W + R+WGQ W++ + L G+SL+F++ D R TS V P +W Sbjct: 143 TVVVTATNQAPPPV---NGMKG------EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDW 278
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14 Identity = 48/157 (30.57%), Postives = 76/157 (48.41%), Query Frame = -2 Query: 268 IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQY-------RAGIVPISFRRIPCAKKGGIRFTVNGHS--YFNLVLITNVGGAGDVHSVSIKGSKTG--WQAMSRNWGQNWQSNSYLN---GQSLSFQLTASDGRTVTSNNVVPGNW 696 + V T+ CP GG C HFDM+ AF +A AG++ I ++R+PC + F V+ S Y+ +L+ G GD+ +V I ++ G W+AM ++WG W+ NS S +LT+ G+ + +NNV+P W Sbjct: 114 VTVVITDSCP---------GGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSNTGKPLSPPFSIRLTSGSGKVLVANNVIPSGW 261 The following BLAST results are available for this feature:
BLAST of CF831931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831931 ID=CF831931; Name=CF831931; organism=Citrus sinensis; type=EST; length=703bpback to top |