CF832019
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17_SPOFR (40S ribosomal protein S17 OS=Spodoptera frugiperda GN=RpS17 PE=2 SV=3) HSP 1 Score: 154.836 bits (390), Expect = 4.090e-37 Identity = 76/122 (62.30%), Postives = 100/122 (81.97%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEP 435 MGRVRTKTVKK+++ +IE+YY+R+TLDF TNK+I EE+AIIP+K LRNKIAGF+THLM R+ VRGIS+KLQEEERERR ++VP+ SA++ D I+VD +T DML L ++I+GL +P Sbjct: 1 MGRVRTKTVKKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 122
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17_DROME (40S ribosomal protein S17 OS=Drosophila melanogaster GN=RpS17 PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.554e-36 Identity = 76/124 (61.29%), Postives = 98/124 (79.03%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQS 441 MGRVRTKTVKK+++ +IE+YY+R+TLDFHTNK+I EEVAIIP+K LRNKIAG+ THLM R+ VRGIS+KLQEEERERR ++VP SA++ D I+VD +T +ML L +I GL +P + Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17_ANOGA (40S ribosomal protein S17 OS=Anopheles gambiae GN=RpS17 PE=2 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 7.713e-36 Identity = 74/114 (64.91%), Postives = 95/114 (83.33%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDI 411 MGRVRTKT+KK+S+ +IE+YY+R+T+DF TNK+I+EEVAIIP+K LRNKIAGF THLM R+ VRGIS+KLQEEERERR ++VPD SA++ D I+VD ET +ML L ++I Sbjct: 1 MGRVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI 114
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17_NEUCR (40S ribosomal protein S17 OS=Neurospora crassa GN=rps-17 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.828e-35 Identity = 78/134 (58.21%), Postives = 99/134 (73.88%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAI------KTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMITP 453 MGRVRTKTVKKS++ +IERYY ++TLDF TNK+I +E+AII SKRLRNKIAG++THLM RI +GPVRGIS KLQEEERER+ +VP+ SA+ ++ ++ VD ET D+L LG I V V P + P Sbjct: 1 MGRVRTKTVKKSAKVIIERYYPKLTLDFETNKRICDEIAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSALDFTQNSESGQLDVDTETKDLLKHLGFDSIP--VNVIPVTQAQP 132
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17_DICDI (40S ribosomal protein S17 OS=Dictyostelium discoideum GN=rps17 PE=3 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 4.232e-34 Identity = 69/106 (65.09%), Postives = 90/106 (84.91%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDML 387 MGRVRTKT+K++S+ +IE++Y R+T DF TNK+ +++A IPSKRLRNKIAGF THLM RI GPVRGIS KLQEEERE+R ++VP ESAIKT+E+K+D++ +ML Sbjct: 1 MGRVRTKTIKRASKLLIEKHYPRLTNDFDTNKRTCDKLAKIPSKRLRNKIAGFCTHLMRRIANGPVRGISYKLQEEEREKRDNYVPQESAIKTNEVKIDRDVEEML 106
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17_CAEEL (40S ribosomal protein S17 OS=Caenorhabditis elegans GN=rps-17 PE=2 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 9.428e-34 Identity = 73/115 (63.48%), Postives = 91/115 (79.13%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDE---IKVDKETLDMLAALGMS 405 M RVRTKTVKK+SR +IE+YY+RMT DFH NK++ +EVAII SK LRNKIAG+ THLM RI +GPVRGIS+KLQEEERERR +++P+ S + + IKVD +T DML A G + Sbjct: 1 MSRVRTKTVKKASRVLIEKYYTRMTNDFHNNKRVCDEVAIIGSKPLRNKIAGYITHLMRRIERGPVRGISIKLQEEERERRDNYMPEISTVDPSQLTSIKVDTDTSDMLKAAGFN 115
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17B_YEAST (40S ribosomal protein S17-B OS=Saccharomyces cerevisiae GN=RPS17B PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.231e-33 Identity = 71/127 (55.91%), Postives = 95/127 (74.80%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDE----IKVDKETLDMLAALGMSDISGLVEVEPQ 438 MGRVRTKTVK++S+ +IERYY ++TLDF TNK++ +E+A I SKRLRNKIAG++THLM RI KGPVRGIS KLQEEERER+ +VP+ SA+ + VD +T D++ +LG+ ++ V Q Sbjct: 1 MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAGYTTHLMKRIQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLGLKLPLSVINVSAQ 127
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17A_YEAST (40S ribosomal protein S17-A OS=Saccharomyces cerevisiae GN=RPS17A PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.231e-33 Identity = 71/127 (55.91%), Postives = 95/127 (74.80%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDE----IKVDKETLDMLAALGMSDISGLVEVEPQ 438 MGRVRTKTVK++S+ +IERYY ++TLDF TNK++ +E+A I SKRLRNKIAG++THLM RI KGPVRGIS KLQEEERER+ +VP+ SA+ + VD +T D++ +LG+ ++ V Q Sbjct: 1 MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAGYTTHLMKRIQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLGLKLPLSVINVSAQ 127
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17_ENCCU (40S ribosomal protein S17 OS=Encephalitozoon cuniculi GN=RPS17 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18 Identity = 43/110 (39.09%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALG 399 MG VR K VK+++R + E+Y+ R+ F N ++++VA++ SK+L+N+IAG+ T L +I KG + +K EEERER+ + +P ES + D ++VD T++M+ G Sbjct: 1 MGCVRNKIVKRAARTIAEKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEERERKENVIPKESMLDVDCVEVDDVTMEMIKRYG 110
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17E_METJA (30S ribosomal protein S17e OS=Methanocaldococcus jannaschii GN=rps17e PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 30/61 (49.18%), Postives = 46/61 (75.41%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRI 252 MGR+R +K+++ ++I++Y T DF TNK++LEEVA I +KRLRN+IAG+ TH M ++ Sbjct: 1 MGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQL 61 The following BLAST results are available for this feature:
BLAST of CF832019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832019 ID=CF832019; Name=CF832019; organism=Citrus sinensis; type=EST; length=705bpback to top |