CF832020

Overview
NameCF832020
Unique NameCF832020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6288 contig Csv1_Contig6288:778..1617. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832020 vs. ExPASy Swiss-Prot
Match: PDIA1_HUMAN (Protein disulfide-isomerase OS=Homo sapiens GN=P4HB PE=1 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 2.301e-19
Identity = 51/145 (35.17%), Postives = 85/145 (58.62%), Query Frame = -2
Query:  411 ADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVAD-SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 836
            A++I  +   + EGK+ P   S              +   + +D+ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  +V  +PT+ FF +++ +TV  Y G+RT +    F+E+     A
Sbjct:  336 AERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGA 478          
BLAST of CF832020 vs. ExPASy Swiss-Prot
Match: PDIA1_RAT (Protein disulfide-isomerase OS=Rattus norvegicus GN=P4hb PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.695e-19
Identity = 50/145 (34.48%), Postives = 85/145 (58.62%), Query Frame = -2
Query:  411 ADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVAD-SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 836
            A++I  +   + EGK+ P   S              +   + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  +V  +PT+ FF +++ +TV  Y G+RT +    F+E+     A
Sbjct:  338 AEKITQFCHHFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CF832020 vs. ExPASy Swiss-Prot
Match: PDIA1_MACFU (Protein disulfide-isomerase OS=Macaca fuscata fuscata GN=P4HB PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.695e-19
Identity = 50/145 (34.48%), Postives = 84/145 (57.93%), Query Frame = -2
Query:  411 ADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVAD-SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 836
            A++I  +   + EGK+ P   S              +   + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  +V  +PT+ FF ++  +TV  Y G+RT +    F+E+     A
Sbjct:  338 AERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDENKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAIKVHSFPTLKFFPASVDRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CF832020 vs. ExPASy Swiss-Prot
Match: PDIA1_BOVIN (Protein disulfide-isomerase OS=Bos taurus GN=P4HB PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.695e-19
Identity = 50/145 (34.48%), Postives = 85/145 (58.62%), Query Frame = -2
Query:  411 ADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVAD-SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 836
            A++I  +   + EGK+ P   S              +   + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  +V  +PT+ FF +++ +TV  Y G+RT +    F+E+     A
Sbjct:  338 AEKITEFCHRFLEGKIKPHLMSQELPDDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CF832020 vs. ExPASy Swiss-Prot
Match: PDIA1_MOUSE (Protein disulfide-isomerase OS=Mus musculus GN=P4hb PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.744e-19
Identity = 49/145 (33.79%), Postives = 85/145 (58.62%), Query Frame = -2
Query:  411 ADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVADS-LQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 836
            A++I  +   + EGK+ P   S              +  +  +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  +++IAK D+TAN++  +  +V  +PT+ FF +++ +TV  Y G+RT +    F+E+     A
Sbjct:  338 AEKITEFCHRFLEGKIKPHLMSQEVPEDWDKQPVKVLVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANEV--EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CF832020 vs. ExPASy Swiss-Prot
Match: GSBP_CHICK (Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Gallus gallus PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 8.744e-19
Identity = 52/166 (31.33%), Postives = 91/166 (54.82%), Query Frame = -2
Query:  372 ADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXV--ADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGK--TVPYEGDRTKEDIVDFIEN-------NRDKAAPKETVKEESGKDE 836
            A+++  +   + EGK+ P   S              V    + +++ F+  KNV +EFYAPWCGHCK+LAP+ D +  +Y++D ++VIAK ++TAN++  +  +V  +PT+ F  AS +   + Y G+RT +    F+E+       N D    +E ++ +  +DE
Sbjct:  336 AEKLTQFCHHFLEGKIKPHLMSNEPLPEDWDKQPVKVLVGKNYEEVAFDEKKNVFIEFYAPWCGHCKQLAPMWDRLGEAYKDDENIVIAKMESTANEV--EAIKVHSFPTLKFFPASAERTVIDYNGERTLDGYKKFLESGGQDGYGNNDDDDLEEALESDMEEDE 499          
BLAST of CF832020 vs. ExPASy Swiss-Prot
Match: PDIA1_CRIGR (Protein disulfide-isomerase OS=Cricetulus griseus GN=P4HB PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.142e-18
Identity = 49/145 (33.79%), Postives = 84/145 (57.93%), Query Frame = -2
Query:  411 ADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVAD-SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 836
            A++I  +   + EGK+ P   S              +   + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  +++IAK D+TAN++  +  +V  +PT+ FF + + +TV  Y G+RT +    F+E+     A
Sbjct:  338 AEKITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANEV--EAVKVHSFPTLKFFPATADRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CF832020 vs. ExPASy Swiss-Prot
Match: ERP60_SCHMA (Probable protein disulfide-isomerase ER-60 OS=Schistosoma mansoni PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.402e-18
Identity = 46/135 (34.07%), Postives = 78/135 (57.78%), Query Frame = -2
Query:  435 DQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFI 833
            D  + ++ ++++G + P  KS              VA +  ++V N  K+V++ F+A WCGHCK L P  +E A   +N+ ++V+A  DATAND+P   ++V+G+PT++F     K+ P  YEG R   DI+ ++
Sbjct:  329 DAFSDFLNKFEDGLLTPHVKSEPLPTDDSSAVKKLVALNFDEIVNNEEKDVMVVFHAGWCGHCKNLMPKYEEAASKVKNEPNLVLAAMDATANDVP-SPYQVRGFPTIYFVPKGKKSSPVSYEGGRDTNDIIKYL 462          
BLAST of CF832020 vs. ExPASy Swiss-Prot
Match: PDI1_CAEEL (Protein disulfide-isomerase 1 OS=Caenorhabditis elegans GN=pdi-1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17
Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = -2
Query:  387 ADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEE 725
            A +  ++  +  K V ++FYAPWCGHCK+L P+ DE+A  Y+++ +VVIAK DAT N++     +V  +PT+  + + S   V Y+GDR  E   +F+      A+  ET  ++
Sbjct:  370 ASNFNEIALDETKTVFVKFYAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATLNELA--DVKVNSFPTLKLWPAGSSTPVDYDGDRNLEKFEEFVNKYAGSASESETASQD 481          

HSP 2 Score: 83.1889 bits (204), Expect = 2.016e-15
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = -2
Query:  390 NSGKNVLLEFYAPWCGHCKKLAPILDEVA-VSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKE 698
            N  + VL++FYAPWC HCK LAP  DE A +  +  +D+ +AK DAT N      FEV+GYPT+ +   SGK   Y G R    IVD++   + K+ P  T  E
Sbjct:   38 NGNEFVLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQALASKFEVRGYPTILY-FKSGKPTKYTGGRATAQIVDWV---KKKSGPTVTTVE 137          
BLAST of CF832020 vs. ExPASy Swiss-Prot
Match: PDI_YEAST (Protein disulfide-isomerase OS=Saccharomyces cerevisiae GN=PDI1 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.154e-17
Identity = 51/141 (36.17%), Postives = 78/141 (55.32%), Query Frame = -2
Query:  426 DADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQN-DADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGK--TVPYEGDRTKEDIVDFIENN 839
            ++  I   VK++ +G   P  KS              V  +  ++V +  K+VL+ +YAPWCGHCK+LAP   E+A +Y N  +DV+IAK D T ND+ G    ++GYPT+       K  +V Y+G R+ + + DFI+ N
Sbjct:  345 ESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRG--VVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKEN 483          
The following BLAST results are available for this feature:
BLAST of CF832020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PDIA1_HUMAN2.301e-1935.17Protein disulfide-isomerase OS=Homo sapiens GN=P4H... [more]
PDIA1_RAT6.695e-1934.48Protein disulfide-isomerase OS=Rattus norvegicus G... [more]
PDIA1_MACFU6.695e-1934.48Protein disulfide-isomerase OS=Macaca fuscata fusc... [more]
PDIA1_BOVIN6.695e-1934.48Protein disulfide-isomerase OS=Bos taurus GN=P4HB ... [more]
PDIA1_MOUSE8.744e-1933.79Protein disulfide-isomerase OS=Mus musculus GN=P4h... [more]
GSBP_CHICK8.744e-1931.33Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
PDIA1_CRIGR1.142e-1833.79Protein disulfide-isomerase OS=Cricetulus griseus ... [more]
ERP60_SCHMA7.402e-1834.07Probable protein disulfide-isomerase ER-60 OS=Schi... [more]
PDI1_CAEEL1.649e-1736.84Protein disulfide-isomerase 1 OS=Caenorhabditis el... [more]
PDI_YEAST2.154e-1736.17Protein disulfide-isomerase OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832020 ID=CF832020; Name=CF832020; organism=Citrus sinensis; type=EST; length=840bp
TTTTTTTTTTTTTTGGACGTAATAAGCAAAATCCGAAATAATTAACGCAT
TAAATTAAAATTATCCATTACGGATTTAACACGCAGTAAGTTACTCCTAG
GCCGAAAATACTAATATCACAACTATGCGAATACCAAAAAGTACTGCAGC
TACAAATGCCAAAAATGCCTCCCCATTTTATTCACGGGAACAGAACAGAT
CTGTAAAGGGAAATGGCCTCAGAAAAAGCTATAAGGGGGGATATAGGACA
AGGGGGAGGAGAACATCAGGCATTGTTTTGTCGACACTGATAGTTTTGGT
ATAACATCCGCCAAACACGCGCCAACCGACTATGTGCACGGCTCTCTAAA
CATACCCATTCCTTCTTAGAGCTCATCTTTTCCAGATTCCTCTTTTACAG
TTTCCTTGGGGGCAGCTTTGTCCCTGTTATTTTCAATGAAGTCAACAATA
TCTTCTTTGGTCCTATCCCCCTCATAGGGCACTGTCTTTCCACTAGCAGA
TCGGAAGAACACGGTTGGGTAACCTTGGACTTCAAAGGTGTCACCAGGAA
TATCATTTGCGGTTGCATCAAATTTTGCAATAACAACATCAGCATCATTT
TGATATGAGACAGCAACTTCATCCAAGATTGGAGCCAACTTTTTGCAGTG
TCCACACCAAGGAGCGTAAAACTCGAGCAAAACATTTTTTCCAGAGTTGA
AAACCATGTCCTGAAGGCTGTCAGCAACAACCACTTTCACAGGCTCGTTG
TTCTCTTCAGGGATAGGCTCAGACTTTCTGAATGGGGGAACCTTGCCTTC
CTTGTATTCCTTCACCCAAGGTGCAATCTGATCGGCATCC
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