CF832022

Overview
NameCF832022
Unique NameCF832022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6288 contig Csv1_Contig6288:764..1600. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: PDI_YEAST (Protein disulfide-isomerase OS=Saccharomyces cerevisiae GN=PDI1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.267e-17
Identity = 51/142 (35.92%), Postives = 77/142 (54.23%), Query Frame = -1
Query:  409 LNADQIAPWVKEYKEGKVPPFRKFXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQN-DADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGK--TVPYEGDRTKEDIVDFIENN 825
            L +  I   VK++ +G   P  K               V  +  ++V +  K+VL+ +YAPWCGHCK+LAP   E+A +Y N  +DV+IAK D T ND+ G    ++GYPT+       K  +V Y+G R+ + + DFI+ N
Sbjct:  344 LESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRG--VVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKEN 483          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: ERP38_NEUCR (Protein disulfide-isomerase erp38 OS=Neurospora crassa GN=erp38 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.069e-16
Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = -1
Query:  385 SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDAD-VVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKE 702
            +  D+V  SGK  L+EF+APWCGHCK LAP+ +E+A + +   D V IAK DA A    G  F VQG+PT+ FF   S + V Y+G R  + + +FI       A K+
Sbjct:   29 NFDDVVLKSGKPTLVEFFAPWCGHCKNLAPVYEELATALEYAKDKVQIAKVDADAERALGKRFGVQGFPTLKFFDGKSEQPVDYKGGRDLDSLSNFIAEKTGVKARKK 136          

HSP 2 Score: 74.3294 bits (181), Expect = 9.364e-13
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = -1
Query:  418 KNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA--NDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 672
            KNVL+ F APWCGHCK LAP  +++A ++ +D ++ IAK DA A         + V G+PT+ FF   S     Y G R++ D+V F+
Sbjct:  159 KNVLVAFTAPWCGHCKNLAPTWEKLAATFASDPEITIAKVDADAPTGKKSAAEYGVSGFPTIKFFPKGSTTPEDYNGGRSEADLVKFL 246          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: PDIA2_HUMAN (Protein disulfide-isomerase A2 OS=Homo sapiens GN=PDIA2 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.823e-16
Identity = 44/113 (38.94%), Postives = 68/113 (60.18%), Query Frame = -1
Query:  370 SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASG-KTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEE 702
            + + + F+  KNV ++FYAPWC HCK++AP  + +A  YQ+  D++IA+ DATAN++  D F V G+PT+ +F +  G K + Y+  R  E    F++N      P E   EE
Sbjct:  397 NFEQVAFDETKNVFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDIIIAELDATANEL--DAFAVHGFPTLKYFPAGPGRKVIEYKSTRDLETFSKFLDNG--GVLPTEEPPEE 505          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: PDIA6_MEDSA (Probable protein disulfide-isomerase A6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.305e-16
Identity = 45/116 (38.79%), Postives = 68/116 (58.62%), Query Frame = -1
Query:  364 DSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI-ENNRDKAAPKETVKEESG 705
            ++  ++V +  K+VL+EFYAPWCGHCK LAPI ++VA  ++++ DVVIA  DA       + ++V G+PT+ FF   +     Y G R  +D V FI E +      K  +  E+G
Sbjct:  155 ETFNEVVLDGTKDVLVEFYAPWCGHCKSLAPIYEKVAAVFKSEDDVVIANLDADKYRDLAEKYDVSGFPTLKFFPKGNKAGEDYGGGRDLDDFVAFINEKSGTSRDAKGQLTSEAG 270          

HSP 2 Score: 75.485 bits (184), Expect = 4.203e-13
Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = -1
Query:  418 KNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 672
            K  L+EFYAPWCGHCKKLAP  +++  S++    V+IAK D   +      + V GYPT+ +F   S +   +EG RT E + +F+
Sbjct:   47 KGALVEFYAPWCGHCKKLAPEYEKLPNSFKKAKSVLIAKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPKKFEGPRTAESLAEFV 132          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: PDIA4_CAEEL (Probable protein disulfide-isomerase A4 OS=Caenorhabditis elegans GN=C14B9.2 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.928e-16
Identity = 54/158 (34.18%), Postives = 77/158 (48.73%), Query Frame = -1
Query:  352 DQIAPWVKEYKEGKVPPFRKFXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSY-QNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFIENNRDKAAPKETVKEESGKDEL 816
            + +  ++K+   GK     K               V  +   +V +  K+VL+EFYAPWCGHCK       E+A +  +   +VV+AK DAT ND P   F V+G+PT++F  A  K+ P  Y G+R  ED+  F+         K  VK    KDEL
Sbjct:  470 ENLEAFMKQISSGKAKAHVKSAPAPKDDKGPVKTVVGSNFDKIVNDESKDVLIEFYAPWCGHCKSFESKYVELAQALKKTQPNVVLAKMDATINDAPSQ-FAVEGFPTIYFAPAGKKSEPIKYSGNRDLEDLKKFM--------TKHGVKSFQKKDEL 618          

HSP 2 Score: 77.0258 bits (188), Expect = 1.445e-13
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = -1
Query:  379 DMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRD---KAAPKETV 693
            D       +VL++FYAPWCGHCK LAP  ++ +    +   + +AK DAT     G  FE+QGYPT+ F         Y+G R +  IV+++E+  D   K  P+E V
Sbjct:   47 DAFLKKNPSVLVKFYAPWCGHCKHLAPEYEKAS----SKVSIPLAKVDATVETELGKRFEIQGYPTLKFWKDGKGPNDYDGGRDEAGIVEWVESRVDPNYKPPPEEVV 150          

HSP 3 Score: 68.9366 bits (167), Expect = 3.934e-11
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = -1
Query:  388 DSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQ-NDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPK 705
            ++  D + N+ + VL+EFYAPWCGHCKKLAP  ++ A   +   + V + K DAT     G  + V GYPT+     +G+   Y G R    I+ ++ +    AA K
Sbjct:  155 ENFDDFISNN-ELVLVEFYAPWCGHCKKLAPEYEKAAQKLKAQGSKVKLGKVDATIEKDLGTKYGVSGYPTMKI-IRNGRRFDYNGPREAAGIIKYMTDQSKPAAKK 259          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: PDIA2_PONAB (Protein disulfide-isomerase A2 OS=Pongo abelii GN=PDIA2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.182e-15
Identity = 40/99 (40.40%), Postives = 63/99 (63.64%), Query Frame = -1
Query:  412 SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASG-KTVPYEGDRTKEDIVDFIEN 702
            + + + F+  KNV ++FYAPWC HCK++AP  + +A  YQ+  DV+IA+ DATAN++  D F V G+PT+ +F +  G K + Y+  R       F++N
Sbjct:  397 NFEQVAFDETKNVFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDVIIAELDATANEL--DAFAVHGFPTLKYFPAGPGRKVIEYKSTRDLGTFSKFLDN 493          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: TIGA_ASPNG (Protein disulfide-isomerase tigA OS=Aspergillus niger GN=tigA PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.660e-15
Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = -1
Query:  367 SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDAD-VVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEES 702
            +  D+V  SGK  L+EF+APWCGHCK LAP+ +E+  ++ + +D V + K DA  +   G  F VQG+PT+ +F   S +   Y+G R  E +  FI + +    P+   KE S
Sbjct:   28 NFDDVVLKSGKPALVEFFAPWCGHCKNLAPVYEELGQAFAHASDKVTVGKVDADEHRDLGRKFGVQGFPTLKWFDGKSDEPEDYKGGRDLESLSSFI-SEKTGVKPRGPKKEPS 140          

HSP 2 Score: 77.7962 bits (190), Expect = 8.469e-14
Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = -1
Query:  418 DSLQDMVFNSG----KNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFE--VQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 705
            + L D  F        +VL+ F APWCGHCK LAP  + +A  +  + +VVIAK DA A +      E  V GYPT+ FF   S ++VPYEG R+++  +DF+
Sbjct:  143 EMLNDATFKGAVGGDNDVLVAFTAPWCGHCKNLAPTWEALANDFVLEPNVVIAKVDADAENGKATAREQGVSGYPTIKFFPKGSTESVPYEGARSEQAFIDFL 245          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: PDI_ALTAL (Protein disulfide-isomerase (Fragment) OS=Alternaria alternata PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.106e-13
Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = -1
Query:  502 QIAPWVKEYKEGKVPPFRKFXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQND---ADVVIAKFDATANDIPGDTFEVQGY 813
            +I  +V ++  GK+ P  K               VA + +D+V ++ K+VL+EFYAPWCGHCK LAP  +E+   Y +D     V IAK DAT ND+P    E+QG+
Sbjct:  208 EIGKFVDDFLAGKIDPSIKSEPIPESNDGPVTVVVAHNYKDVVIDNDKDVLVEFYAPWCGHCKALAPKYEELGQLYASDELSKLVTIAKVDATLNDVPD---EIQGF 311          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: EUG1_YEAST (Protein disulfide-isomerase EUG1 OS=Saccharomyces cerevisiae GN=EUG1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.106e-13
Identity = 49/145 (33.79%), Postives = 74/145 (51.03%), Query Frame = -1
Query:  409 LNADQIAPWVKEYKEGKVPPFRKFXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADV----VIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFIENN 825
            L+ D I   VK+Y+EG   P  K               V  +  D+V +  K+VL+++YA WC H K+ API +E+A    +D  V    +IA+ D+ ANDI   +F V GYPT+    A   + P  +   R  ED+ +FI+ +
Sbjct:  343 LDRDMIVQLVKDYREGTAKPIVKSEEIPKEQKSNVYKIVGKTHDDIVHDDDKDVLVKYYATWCIHSKRFAPIYEEIANVLASDESVRDKILIAEVDSGANDIL--SFPVTGYPTIALYPAGNNSKPIIFNKIRNLEDVFEFIKES 485          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: PDI2_SCHPO (Protein disulfide-isomerase C17H9.14c OS=Schizosaccharomyces pombe GN=SPAC17H9.14c PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.218e-13
Identity = 33/97 (34.02%), Postives = 55/97 (56.70%), Query Frame = -1
Query:  418 DSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPT-VFFRSASGKTVPYEGDRTKEDIVDFI 705
            + L++ +  S K  L+EFYA WCGHCK LAP+ +E+   +++  DV+I K DA  +    D + + G+PT ++F     + V Y   R  + +  F+
Sbjct:   29 NELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWFPPDGSEPVQYSNARDVDSLTQFV 125          

HSP 2 Score: 75.0998 bits (183), Expect = 5.490e-13
Identity = 39/113 (34.51%), Postives = 66/113 (58.41%), Query Frame = -1
Query:  361 MVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFI-ENNRDKAAPKETVKEESGK 690
            +V +  K+VL+EFYA WCG+CK+LAP  + +   ++N+ +V I K +A      G   EV  +PT+ F     K  P  YEGDR+ E ++++I + +  + +P  T+   +G+
Sbjct:  153 VVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSGTQRSPDGTLLSTAGR 265          
The following BLAST results are available for this feature:
BLAST of CF832022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PDI_YEAST6.267e-1735.92Protein disulfide-isomerase OS=Saccharomyces cerev... [more]
ERP38_NEUCR1.069e-1643.52Protein disulfide-isomerase erp38 OS=Neurospora cr... [more]
PDIA2_HUMAN1.823e-1638.94Protein disulfide-isomerase A2 OS=Homo sapiens GN=... [more]
PDIA6_MEDSA5.305e-1638.79Probable protein disulfide-isomerase A6 OS=Medicag... [more]
PDIA4_CAEEL6.928e-1634.18Probable protein disulfide-isomerase A4 OS=Caenorh... [more]
PDIA2_PONAB1.182e-1540.40Protein disulfide-isomerase A2 OS=Pongo abelii GN=... [more]
TIGA_ASPNG7.660e-1538.60Protein disulfide-isomerase tigA OS=Aspergillus ni... [more]
PDI_ALTAL1.106e-1340.19Protein disulfide-isomerase (Fragment) OS=Alternar... [more]
EUG1_YEAST1.106e-1333.79Protein disulfide-isomerase EUG1 OS=Saccharomyces ... [more]
PDI2_SCHPO3.218e-1334.02Protein disulfide-isomerase C17H9.14c OS=Schizosac... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01C24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832022 ID=CF832022; Name=CF832022; organism=Citrus sinensis; type=EST; length=837bp
CGTAATAAGCAAAATCCGAAATAATTACCCTATAAAATTAAAATTATCCA
TTACGGATTTAACACGCAGTTTGTTACTCCTAGGCCGAAAATACTAATAT
CACAACTATGCGAATACCAAAAAGTACTGCAGCTACAAATGCCTCCAATG
CCTCCCCATTTTATTCACGGGAACAGAACAGATCTGTAAAGGGAAATGGC
CTCAGAAAAAGCTATAAGGGGGGATATAGGACAAGGGGGAGGAGAACATC
AGGCATTGTTTTGTCGACACTGATAGTTTTGGTATAACATCCGCCAAACA
CGCGCCAACCGACTATGTGCACGGCTCTCTAAACATACCCATTCCTTCTT
AGAGCTCATCTTTTCCAGATTCCTCTTTTACAGTTTCCTTGGGGGCAGCT
TTGTCCCTGTTATTTTCAATGAAGTCAACAATATCTTCTTTGGTCCTATC
CCCCTCATAGGGCACTGTCTTTCCACTAGCAGATCGGAAGAACACGGTTG
GGTAACCTTGGACTTCAAAGGTGTCACCAGGAATATCATTTGCGGTTGCA
TCAAATTTTGCAATAACAACATCAGCATCATTTTGATATGAGACAGCAAC
TTCATCCAAGATTGGAGCCAACTTTTTGCAGTGTCCACACCAAGGAGCGT
AAAACTCGAGCAAAACATTTTTTCCAGAGTTGAAAACCATGTCCTGAAGG
CTGTCAGCAACAACCACTTTCACAGGCTCGTTGTTCTCTTCAGGGATAGG
CTCAAACTTTCTGAATGGGGGAACCTTGCCTTCCTTGTATTCCTTCACCC
AAGGTGCAATCTGATCGGCATTCAAGTTCGGCTTCAA
back to top