CF832028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RLP7_YEAST (Ribosome biogenesis protein RLP7 OS=Saccharomyces cerevisiae GN=RLP7 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.088e-23 Identity = 62/131 (47.33%), Postives = 78/131 (59.54%), Query Frame = -1 Query: 377 LLFIIRIRGINAVDPKTK--KILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY------GKLNKQRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPF 745 LLFI+R+RG AV+ K KIL LLRL + GVF+K+ K +L + PYV G P+L S++ LI KRG + I L DN I+E+ LG HGIIC+ED IHEI T+G F N FL PF Sbjct: 141 LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPF 271
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RLP7_CANGA (Ribosome biogenesis protein RLP7 OS=Candida glabrata GN=RLP7 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.253e-21 Identity = 56/136 (41.18%), Postives = 86/136 (63.24%), Query Frame = -1 Query: 377 NPEAKLLFIIRIRGINA--VDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRG---YGKLNKQR---IALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPF 760 N E +LLF++R++G A + K +IL LRL ++ VF+K+ + T ++L + PYV G P+LKS++ LI KR Y + +++ I L DN I+E+ LG G+IC++D IHEI T+G +F + N FL PF Sbjct: 131 NGEEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVGKPSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATLGENFTKCNFFLQPF 266
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RLP7_KLULA (Ribosome biogenesis protein RLP7 OS=Kluyveromyces lactis GN=RLP7 PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.637e-21 Identity = 57/134 (42.54%), Postives = 79/134 (58.96%), Query Frame = -1 Query: 377 EAKLLFIIRIRGINAVD--PKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNK------QRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPF 754 E LLF+IR++G AV K K+L LLRL ++ GVF+K+ K +L V PY+ G P+L S++ LI KR + + I L DN I+E+ LG G+IC+ED IHEI T+G +F + FL PF Sbjct: 134 EPSLLFVIRVKGPTAVKIPAKAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKRSRIMWQRPEDKEPKEIILNDNNIVEEKLGDEGVICIEDIIHEISTLGENFSKCTFFLLPF 267
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RLP7_ASHGO (Ribosome biogenesis protein RLP7 OS=Ashbya gossypii GN=RLP7 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20 Identity = 53/133 (39.85%), Postives = 78/133 (58.65%), Query Frame = -1 Query: 377 AKLLFIIRIRGINA--VDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY------GKLNKQRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPF 751 A LLF++R+RG A + K ++L LLRL ++ GVF+++ +L V PYV G P+L S++ L+ KR G+ + L DN ++E+ LG G+IC+ED IHEI T+G F + N FL PF Sbjct: 110 ATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGRPSLASIRALVQKRARVVHQRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIHEIATMGEAFAKCNFFLLPF 242
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RL7_ENCCU (60S ribosomal protein L7 OS=Encephalitozoon cuniculi GN=RPL7 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.032e-20 Identity = 54/168 (32.14%), Postives = 95/168 (56.55%), Query Frame = -1 Query: 269 FYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRN-HYVEGGDAGNREDYINELIRRM 769 FYV EA+ +I IR PK +K+L+L RL++I V ++ NK+T ML ++ +V +G ++ +++L+Y +G G+ R+ LT+ FI + G+ I C+E+ +H I FK+ N+FL+PF +++ + +GG GN +D ++ L+ RM Sbjct: 73 FYVPKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSGRNGHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGTEMFKKVNSFLYPFHLSPPRGGFKGQKSKSFNDGGSVGNHQDLLSNLLERM 238
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RLP7_DEBHA (Ribosome biogenesis protein RLP7 OS=Debaryomyces hansenii GN=RLP7 PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.297e-18 Identity = 56/136 (41.18%), Postives = 82/136 (60.29%), Query Frame = -1 Query: 377 AKLLFIIRI----RGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY-----GKLNKQRIA-LTDNFIIEQALGQH-GIICMEDFIHEILTVGPHFKEANNFLWPF 751 AKLLFIIRI +G+ V K +K+L LLRL + GVF+K+ AT+ +L + PY+ G P+L S+++L KR + + RI L +N ++E G G IC+ED IHE+ T+G HFK +N++ PF Sbjct: 92 AKLLFIIRIPDHTKGLK-VPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKRACISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIHELATLGEHFKTVSNWILPF 226
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RLP7_PICJA (Ribosome biogenesis protein RLP7 (Fragment) OS=Pichia jadinii GN=RLP7 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.532e-16 Identity = 49/131 (37.40%), Postives = 76/131 (58.02%), Query Frame = -1 Query: 377 LLFIIRIRG-INAVDP-KTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKL------NKQRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPF 745 L I+R G + A P K +K+LQLLRL +I +GVF+K+ + +L + PY P+L++V++L+ KR + +++ L DN ++E+ LG GIIC+ED IHE + FK +FL PF Sbjct: 32 LYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTVIXQPSLQTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIHETSHLATTFKTVTHFLDPF 162 The following BLAST results are available for this feature:
BLAST of CF832028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832028 ID=CF832028; Name=CF832028; organism=Citrus sinensis; type=EST; length=769bpback to top |