CF832034

Overview
NameCF832034
Unique NameCF832034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5473 contig Csv1_Contig5473:325..1096. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832034 vs. ExPASy Swiss-Prot
Match: 1433B_SHEEP (14-3-3 protein beta/alpha (Fragments) OS=Ovis aries GN=YWHAB PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.048e-40
Identity = 98/194 (50.52%), Postives = 114/194 (58.76%), Query Frame = -1
Query:  191 AYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGAD 772
            AYKNV+GARR+SWR+ISSIEQK E   NE      ++Y                                     KMKGDY RYL+E  +G  ++    ++  AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP            EAIAELDTL EESYKDSTLIMQLLRDNLTLWTS+ Q D  D
Sbjct:   49 AYKNVVGARRSSWRVISSIEQKTER--NEKKQQMGKEY-------------------------------------KMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSP------------EAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 191          
BLAST of CF832034 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.561e-40
Identity = 89/187 (47.59%), Postives = 125/187 (66.84%), Query Frame = -1
Query:  209 YKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM 769
            +K  IGARRASWRI+ S+EQK  + G++  V TI  Y+ K+E EL ++C+ +L ++    +P A+SG++ VF+ KMKGDY+RYLAEF TG E+K A + +L AY+A                   A  FS+   EI+NSP+RA  +AKQA DEA AE+++ G E YKDS L+MQLL++NL LWTS++
Sbjct:   49 FKKTIGARRASWRILESLEQKVTA-GDQPGV-TINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQA----------------WPCAQLFSLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSEL 215          
BLAST of CF832034 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.509e-24
Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = -1
Query:  182 ILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 364
            ILNSPDRACNLAKQAFDEAI+ELD+LGEESYKDSTLIMQLL DNLTLWTSD  +DG DEIK
Sbjct:    1 ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNLTLWTSDTNEDGGDEIK 61          
The following BLAST results are available for this feature:
BLAST of CF832034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_SHEEP2.048e-4050.5214-3-3 protein beta/alpha (Fragments) OS=Ovis arie... [more]
14338_ORYSJ4.561e-4047.59Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]
1433X_MAIZE3.509e-2488.5214-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01D07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832034 ID=CF832034; Name=CF832034; organism=Citrus sinensis; type=EST; length=772bp
TTTTTTTTTTTTTTTAAAAAGAAAACTTAGTACATTCATAATTCCCTTAC
CAAGAGAAGAATGCCTAAATATTCAAAAGCAGGAACACTAGCAACAAACA
TCTTCTCCCTTTAAAAACAGTGGAGAAAGTTCAATCCCATCTGAATTCTC
ACTGTTGTTCGCTTTCAGGCTTGGCCGCTTCTTTAATCTCGTCTGCTCCA
TCATCCTGCATGTCGGAGGTCCACAGAGTGAGGTTGTCACGAAGAAGTTG
CATGATCAAAGTGCTATCCTTGTAGGACTCCTCACCCAGGGTATCCAACT
CAGCAATTGCCTCGTCAAAAGCCTGCTTGGCCAAATTGCAAGCACGATCA
GGAGAGTTCAGGATCTCATAGTAAAACACAGAGAAGTTCAGAGCCAGTCC
TAAACGGATGGGATGAGTCGGAGCCAATTCTGCATTTGCAATATCCTGAG
CGGCTTTATAAGCAGTGAGGGTACTCTCGGCGGCTTCCTTACGCTCGGCT
CCGGTCTTGAACTCAGCCAAGTACCTGTGATAATCTCCCTTCATCTTCAA
ATAGAAAACCTTGGAGTCACCAGAAGAAGCGCAAGGAATGAGGCGGGAGT
CAAGAAGCTTCAAGATGCCGTCGCAGATCGAGGAAAGCTCGGTCTCGATC
TTGGAGCGGTAATCTCGGATCGTGGAGACGTGGTCCTCGTTGCCGCGGCT
CTCCTCTTTCTGTTCGATGGAGGAAATAATGCGCCAGCTGGCACGGCGGG
CGCCGATGACGTTCTTGTAAGC
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