CF835306

Overview
NameCF835306
Unique NameCF835306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9834 contig Csv1_Contig9834:136..821. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPKO_ARATH (Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11
Identity = 39/126 (30.95%), Postives = 73/126 (57.94%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-----TDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G +T +EL   L+ +GQ   + +++ +++  D DG G +   EF+ L    +K    +E L+EAF+ FDK+ NGFI   EL+  + +  +KL      D+ + ++  + D++ DG+I+++EF  +M
Sbjct:  385 GHLTFEELRDGLKKIGQVVPDGDVKMLMDAADTDGNGMLSCDEFVTLSIH-LKRMGCDEHLQEAFKYFDKNGNGFIELDELKVALCD--DKLGHANGNDQWIKDIFFDVDLNKDGRISFDEFKAMM 507          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPK3_PLAF7 (Calcium-dependent protein kinase 3 OS=Plasmodium falciparum (isolate 3D7) GN=CPK3 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11
Identity = 46/131 (35.11%), Postives = 78/131 (59.54%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQN-PTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVD---EMIREADVDGDGQINYEEFVKVMMAK 391
            +G IT ++L   L   G   P   +L  +++++D+DG+G ID+ EF+   A   +   S++ +  AFRVFD D +G I+ AEL H++ N  +K  +T  +V+    MIR+ D + DG+I++ EF ++M  K
Sbjct:  435 KGYITKEQLKKGLEKDGLKLPYNFDL--LLDQIDSDGSGKIDYTEFI--AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMKLK 561          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CAVP_BRAFL (Calcium vector protein OS=Branchiostoma floridae PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11
Identity = 45/133 (33.83%), Postives = 69/133 (51.88%), Query Frame = 2
Query:    2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEV-----DADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK-LTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            F R  E      +   +L  LGQ  T+ E + ++ E      D    G    PE   ++  K    D EEE+  AF+VFD + +G I   E + +M  +GE+ LTD EV+E ++EAD DG+G I+  EF+ ++
Sbjct:   24 FDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNLG----PEEWLVLCSKWVRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 152          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CATR5_PARTE (Caltractin ICL1e OS=Paramecium tetraurelia GN=Icl1e PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11
Identity = 39/124 (31.45%), Postives = 71/124 (57.26%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            G +  +EL   ++SLG +     + +MI E++ +GT  IDF +FL+ +  K+ + +S + + + F +FD D +  I+   L+ V   LGE +T EE+ EM+  A  +G   I+ E+F  +M+ +
Sbjct:   51 GRVDPRELKAAMQSLGFDQKNPTIFNMIAELENEGTD-IDFDQFLDAITSKLGNRESRDGINKIFDLFDDDGSNSINLNNLKRVSKELGETMTAEELAEMLERAASNG-RDISREDFYNIMVKR 172          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CANB2_BOVIN (Calcineurin subunit B type 2 OS=Bos taurus GN=PPP3R2 PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11
Identity = 44/124 (35.48%), Postives = 73/124 (58.87%), Query Frame = 2
Query:   26 ITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLTD----EEVDEMIREADVDGDGQINYEEFVKVM 382
            ++ KE  T +  L +NP    +Q +I+  D DG G +DF EF+   ++     D E++L+ AF ++D D++G+IS  EL  V+  + G+ L D    + VD+ I   D DGDG+I+++EF  V+
Sbjct:   38 LSVKEF-TSMPELQENPL---VQRVIDVFDTDGDGQVDFREFILGTSQFSVRGDEEQKLRFAFSIYDMDKDGYISNGELFQVLKMMVGDNLKDWQLQQLVDKTIILLDKDGDGKISFQEFSAVV 157          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MLR_BOMMO (Myosin regulatory light chain 2 OS=Bombyx mori PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 39/125 (31.20%), Postives = 68/125 (54.40%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKD-TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388
            +G I   +L     SLG+  +E EL +M+ E     +G I+F + L L A +M   +D ++ +  AF+ FD++  G I +  LRH +   G+K + +EVDE   + D+D  G I+  + + ++ A
Sbjct:   72 DGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIAMLTA 190          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MLRV_BOVIN (Myosin regulatory light chain 2, ventricular/cardiac muscle isoform OS=Bos taurus GN=MYL2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 36/123 (29.27%), Postives = 63/123 (51.22%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQ-NPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            +G I   +L     +LG+ N    E+ +M+ E      G I+F  FL +   K+K  D EE +  AF+VFD +  G + A  ++ ++T   E+ + EE+D+M      D  G ++Y+  V ++
Sbjct:   41 DGFIDKNDLRDTFAALGRVNVKNEEIDEMLKEAP----GPINFTVFLQMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYIKEMLTTQAERFSKEEIDQMFAAFPPDVTGNLDYKNLVHII 159          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML24_ORYSJ (Probable calcium-binding protein CML24 OS=Oryza sativa subsp. japonica GN=CML24 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 53/145 (36.55%), Postives = 72/145 (49.66%), Query Frame = 2
Query:    2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDT---------------DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 385
            F R  +G IT  EL   L +LG     A L   +     DG   + F +F +L  R + D                  +EE+KEAF+VFD D +GFISA+EL+ V+  LG  E  +   V EMI   D D DG++++ EF K MM
Sbjct:   47 FDRNGDGEITVDELAQALDALGLEADRAGLAATVGAHVPDGAAGLRFEDFESLH-RALGDALFGSLDVPEDGGGGGGGDEEMKEAFKVFDVDGDGFISASELQEVLKKLGMPEAGSLANVREMICNVDRDSDGRVDFGEF-KCMM 189          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CAVP_BRALA (Calcium vector protein OS=Branchiostoma lanceolatum PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = 2
Query:    2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDAD--GTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK-LTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            F R  E      +   +L  LGQ  T+ E + ++ E          I   E+L L ++ ++  D EEE+  AF+VFD + +G I   E + +M  +GE+ LTD EV+E ++EAD DG+G I+  EF+ ++
Sbjct:   24 FDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSKWVRQ-DDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 152          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CANB_YEAST (Calcineurin subunit B OS=Saccharomyces cerevisiae GN=CNB1 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 41/126 (32.54%), Postives = 69/126 (54.76%), Query Frame = 2
Query:    8 RPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEF 370
            R   G I   E  ++   +  NP    + ++    DAD +G +DF EF+  ++        +E+L+ AF+++D D++GFIS  EL  V+     +NL ++   + VD  I E D DGDG++++EEF
Sbjct:   35 RDSSGSIDKNEFMSI-PGVSSNPLAGRIMEVF---DADNSGDVDFQEFITGLSIFSGRGSKDEKLRFAFKIYDIDKDGFISNGELFIVLKIMVGSNLDDEQLQQIVDRTIVENDSDGDGRLSFEEF 156          
The following BLAST results are available for this feature:
BLAST of CF835306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420
Match NameE-valueIdentityDescription
CDPKO_ARATH6.198e-1130.95Calcium-dependent protein kinase 24 OS=Arabidopsis... [more]
CDPK3_PLAF76.198e-1135.11Calcium-dependent protein kinase 3 OS=Plasmodium f... [more]
CAVP_BRAFL6.198e-1133.83Calcium vector protein OS=Branchiostoma floridae P... [more]
CATR5_PARTE6.198e-1131.45Caltractin ICL1e OS=Paramecium tetraurelia GN=Icl1... [more]
CANB2_BOVIN6.198e-1135.48Calcineurin subunit B type 2 OS=Bos taurus GN=PPP3... [more]
MLR_BOMMO8.094e-1131.20Myosin regulatory light chain 2 OS=Bombyx mori PE=... [more]
MLRV_BOVIN8.094e-1129.27Myosin regulatory light chain 2, ventricular/cardi... [more]
CML24_ORYSJ8.094e-1136.55Probable calcium-binding protein CML24 OS=Oryza sa... [more]
CAVP_BRALA8.094e-1133.85Calcium vector protein OS=Branchiostoma lanceolatu... [more]
CANB_YEAST8.094e-1132.54Calcineurin subunit B OS=Saccharomyces cerevisiae ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835306 ID=CF835306; Name=CF835306; organism=Citrus sinensis; type=EST; length=686bp
GTTCTATAGGCCTTTAGAAGGTTGCATTACCACCAAGGAGCTTGGCACTG
TCCTGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATG
ATCAATGAAGTGGATGCTGATGGTACTGGAACTATTGATTTTCCTGAATT
CCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGC
TGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCA
GCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGGGAGAAGCTTACTGA
TGAGGAAGTCGATGAGATGATAAGGGAAGCTGATGTCGATGGTGATGGCC
AGATAAATTACGAGGAATTTGTCAAGGTTATGATGGCTAAGTAAGTGACT
CCACCCAACCAAAACTTCCTGGGAAAAGAAGAAATTGGTTGATTAATATA
ATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAATTTGATAACTCTGAG
GTCAAGCTAAAGGAAGCATGTTGTCTCCTGCTTCAATTTGTCTTGTGACT
GGAGCAACTTTTCAGTTTTTTAATGTTTTAGTTTTTTTCCGCTCTTCTGT
GAACATTGTTTCTGTTAAATGAGTGACTCGTTGATCTGCCCTATTTCTTA
TTTCGAGATTTTGTGGATAAGAAATTGATATGTGAT
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