CK933899

Overview
NameCK933899
Unique NameCK933899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:79..884. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 8.595e-69
Identity = 133/234 (56.84%), Postives = 164/234 (70.09%), Query Frame = 2
Query:   92 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 793
            +A G   ++    +++A +AEFI+TL+FVFAG GS +AF +LT+ GA  P+                     N SGGH+NPAVTFG  VGG+I++L G+ YW+AQLLG++VACLLL+FVT+G+      +S G      VVFEIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA  FGPA+ +  +  +WVYWVGPLIGGGLAG+VY   FI
Sbjct:    4 LAFGSVGDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAGNWVYWVGPLIGGGLAGLVYGDVFI 237          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 8.595e-69
Identity = 134/236 (56.78%), Postives = 162/236 (68.64%), Query Frame = 2
Query:   92 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFITS 799
            I +G   ++    +L+A L+EFI+TL+FVFAG GS +AF KLT + A  P+                     NISGGH+NPAVT G  VGGNI+++ G  YWIAQ LGS VACLLL FVTNG++     +++G+G    VV EIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA  FGPA+VS  +   W+YWVGPL+GG LAG++Y   FI S
Sbjct:    4 IEIGSVGDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIGS 239          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.466e-68
Identity = 132/234 (56.41%), Postives = 166/234 (70.94%), Query Frame = 2
Query:   92 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 793
            +A G   ++    +++A +AEFI+TL+FVFAG GS +A+ +LT+ GA  P+                     NISGGH+NPAVTFG  VGG+I++L G+ YW+AQLLG+TVACLLL FVT+G+     A++ G+     VVFE+V+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA  FGPA+ +  +  +WVYWVGPL+GGGLAG+VY   FI
Sbjct:    4 LAFGSVGDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLLGFVTHGKAIPTHAVA-GISELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGDFAGNWVYWVGPLVGGGLAGLVYGDVFI 236          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.571e-68
Identity = 133/236 (56.36%), Postives = 167/236 (70.76%), Query Frame = 2
Query:   92 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFITS 799
            +A G   ++    +++A +AEFI+TL+FVFAG GS +A+ +LT+ GA  P+                     NISGGH+NPAVTFG  VGG+I++L G+ YWIAQLLG+++ACLLLKFVT+G+      ++ G+     VV EIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA  FGPA+ + ++  +WVYWVGPLIGGGLAG+VY   FI S
Sbjct:    4 LAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGVA-GISELEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLIGGGLAGLVYGDVFIGS 238          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 5.571e-68
Identity = 131/223 (58.74%), Postives = 155/223 (69.51%), Query Frame = 2
Query:  131 ALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFITS 799
            +LRA LAEFISTL+FVFAG GS +A+ KLT + A                         NISGGHVNPAVTFG  VGG I+++ G+ YWIAQLLGST AC LLK+VT G      ++++G+G    VV EI++TF LVYTVYATA DPKKGSLGTIAP+AIG IVGANILA G F G SMNPA  FGPA+ +  +  HWVYWVGPLIGGGLAG++Y   F+ S
Sbjct:   17 SLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNVFMGS 239          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.372e-66
Identity = 132/235 (56.17%), Postives = 160/235 (68.09%), Query Frame = 2
Query:   89 NIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 793
            NIA G   ++    +L+A +AEFISTL+FVFAG GS +A+ KLT      P+                     NISGGHVNPAVTFG  +GG I++L G+ YWIAQLLG+ V  +L++F T G  T    LS GVG +  VV EI++TFGLVYTVYATA DPKKGSLGTIAPIAIGFIVGANIL  G F G SMNPA  FGPA+ S  + N W+YWVGPL+GGGLAG+VY + ++
Sbjct:    4 NIAFGRFDDSFSAASLKAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCT-GVATPTHGLS-GVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIWIYWVGPLVGGGLAGLVYRYVYM 236          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 7.530e-65
Identity = 122/233 (52.36%), Postives = 153/233 (65.67%), Query Frame = 2
Query:   83 IRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE 781
            ++ I +GH  EA  PD ++A + EFI+T +FVFAG GS MA + L  N                           +ISGGH+NPAVT G  +GG+IS+ R  LYWI QLL S+ AC LL ++T G  T    L+SGV     +++EI++TF L++TVYAT +DPKKGSL    P+  GF+VGANILAGGAF GASMNPA  FGPALVS +W +HWVYWVGPLIGGGLAG +YE
Sbjct:    1 MKKIELGHHSEAAKPDCIKALIVEFITTFLFVFAGVGSAMATDSLVGNTL----VGLFAVAVAHAFVVAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLTGFVVGANILAGGAFSGASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFIYE 229          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58
Identity = 116/220 (52.73%), Postives = 141/220 (64.09%), Query Frame = 2
Query:  125 PDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            P A RAAL+EF++T +FVFA EGS     K+ +    T                       N SGGHVNPAVTFG  VG  IS  R  LYW AQLLG+ +A LLL+  + G     F L   +   +A++ E+VMTFGLVYTVYATA+D + G  G IAP+AIG + GANILAGG FDGA+MNPA  FGPALV W+W +HWVYW+GPLIG G+AG +YEF
Sbjct:   25 PGATRAALSEFVATAVFVFAAEGSVYGLWKM-YRDTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGG-GDIAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWNWRHHWVYWLGPLIGAGMAGALYEF 242          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.388e-57
Identity = 116/234 (49.57%), Postives = 148/234 (63.25%), Query Frame = 2
Query:   95 AVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-TSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 793
            A+GH REA+    +RA LAE I T +FVFAG GS MA  KL   G +T                       ++SGGH+NPAVT G    G I+L R  LY  AQLLGST+ACLLL F+    +     AL +GVG    V+ E V+TF L++ VYAT +DP++ ++G + P+ +G +VGAN+LAGG F GASMNPA  FGPALV+  W +HWVYWVGPLIGG LAG+VY+  F+
Sbjct:    5 ALGHHREASDAGCVRAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFLAVADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRR-AVGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAGVWADHWVYWVGPLIGGPLAGLVYDGLFM 237          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.196e-56
Identity = 115/235 (48.94%), Postives = 150/235 (63.83%), Query Frame = 2
Query:   92 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-TTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 793
            +A+GH REAT P  LRA +AE + T +FVF+G GS MA  KL   G +T                       ++SGGH+NPAVT G   GG+I+L R  LY  AQLLGS++ACLLL  +T G+      A + GVG   AV  E V+TF L++ VYAT +D ++ ++G + P+ +G +VGANILAGG + GASMNPA  FGPAL +  W +HW+YWVGPLIGG LAG+VYE  F+
Sbjct:    4 LALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLG-GGGDTIMGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRR-AVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFM 236          
The following BLAST results are available for this feature:
BLAST of CK933899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
TIP22_MAIZE8.595e-6956.84Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
TIP22_ARATH8.595e-6956.78Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP21_MAIZE1.466e-6856.41Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP21_ORYSJ5.571e-6856.36Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP21_ARATH5.571e-6858.74Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP22_ORYSJ1.372e-6656.17Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP41_ARATH7.530e-6552.36Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
TIP32_ORYSJ1.375e-5852.73Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
TIP44_MAIZE3.388e-5749.57Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
TIP43_ORYSJ2.196e-5648.94Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_H03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933899 ID=CK933899; Name=CK933899; organism=Citrus sinensis; type=EST; length=806bp
GGGGAGACCAGTACACTTACGTGAACCAGTAGTAATCATACCCCAAAGGT
TCAATCTTCATCGTTTGATCTCCATCATGCCGATCAGAAACATTGCCGTT
GGCCATCCCCGTGAGGCGACTCATCCAGATGCCCTAAGGGCAGCCCTAGC
AGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCA
TGGCCTTCAACAAGCTCACTCACAACGGCGCCAACACCCCCTCCGGCCTC
GTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGT
TGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCG
CCTTCGTTGGAGGTAACATCTCCCTTCTACGAGGCATCCTCTACTGGATC
GCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTAC
CAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGTAT
GGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACA
GTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGC
ACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGG
CGTTTGATGGAGCTTCAATGAACCCAGCAGTGTTATTCGGGCCAGCTTTG
GTAAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCAT
CGGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTACCAGTC
TCACGA
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