CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON_BEUC1 (NADH-quinone oxidoreductase subunit N OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=nuoN PE=3 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 2.967e-11 Identity = 29/111 (26.13%), Postives = 59/111 (53.15%), Query Frame = -2 Query: 87 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDR-------IRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGII 398 K+ +AYSSV+H GF+++G+ +++ G++ ++++GL + F L +R ++L + GL P + T+F++ ++ +P SGFV + + F I Sbjct: 336 KRTLAYSSVAHAGFLLVGVVAMSPEGISSVFFYLLAYGLATIGAFALVALVRERDAEGNVTAEASHLAQWAGLGRRSPVVATVFALYLLSFAGIPLTSGFVGKFVAFAAAI 446 HSP 2 Score: 30.4166 bits (67), Expect = 2.967e-11 Identity = 19/81 (23.46%), Postives = 37/81 (45.68%), Query Frame = -1 Query: 394 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYG-LIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 633 K+ +PFH W PD + A +A K+ A+G L+R+ + P P+ +V + ++ + Q ++K+ Sbjct: 258 KVGAVPFHAWTPDVYQGAPTPITGFMAA-CTKVAAFGALLRVVYVVAPAMTWDIQPFLWVVAVLTMVVGTVLAIVQTDMKR 337
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON_PARL1 (NADH-quinone oxidoreductase subunit N OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=nuoN PE=3 SV=1) HSP 1 Score: 51.6026 bits (122), Expect = 3.863e-11 Identity = 25/105 (23.81%), Postives = 58/105 (55.24%), Query Frame = -2 Query: 87 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFA-YLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGII 398 K+ +AYSS+SHMGF ++G+ + T G+ G ++ ++ + +++A +F + + + ++ GL+ P + + ++L + +P ++GF + VF + Sbjct: 299 KRLMAYSSISHMGFAMVGLAAGTPEGVRGVLIYLVIYVVMNAGVFCCILAMQRKEGYVENISDLAGLSRNQPMVAFMMAMLMFSLAGVPPLAGFFGKFYVFMAAV 403 HSP 2 Score: 35.4242 bits (80), Expect = 3.863e-11 Identity = 22/81 (27.16%), Postives = 35/81 (43.21%), Query Frame = -1 Query: 394 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLI-RINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 633 K+ +PFH W PD + A AG K+ A LI R+ P S + + + ++ A + GQ N+K+ Sbjct: 221 KISAVPFHMWTPDVYEGAPTPVTAFFAG-APKVAAMALILRVLFVAFPSMESEWQQIIVFIAIASMVLGAFAAIGQSNIKR 300
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON_PELUB (NADH-quinone oxidoreductase subunit N OS=Pelagibacter ubique GN=nuoN PE=3 SV=1) HSP 1 Score: 51.2174 bits (121), Expect = 3.865e-11 Identity = 33/124 (26.61%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 33 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALF-FLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLA-LPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMA 398 K+ IAYSS+ HMG+ + G+ + ++ G+ +++ + + +++ A F L + + +D++ GL+ P I +L + + SLA +P ++GF A+ +F +I +FL +++ V+A Sbjct: 290 KRLIAYSSIGHMGYALAGLSTGSNEGIQSSIVYMSIYLVMNLAFFSCLLMLKRNDAYYETIDDLSGLSKNHP-ILSLSLLAILFSLAGIPPLAGFFAKFYIFKAVIEQSMYFLAIVGLLSTVIA 412 HSP 2 Score: 35.8094 bits (81), Expect = 3.865e-11 Identity = 23/82 (28.05%), Postives = 39/82 (47.56%), Query Frame = -1 Query: 394 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSI--FSPWFMIVGTVQIIYAASTSPGQRNLKK 633 K+ +PFH W PD + E + L I+ K+ A + I +P + I + P + + +I+ A + GQ NLK+ Sbjct: 212 KISAVPFHMWAPDVY-EGSPTAVTLFFAIVPKVAAL-TVFIRFLYIPFVNMIDQWQPILIFLSIASMIFGAIAAIGQNNLKR 291
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_PARLI (NADH-ubiquinone oxidoreductase chain 4 OS=Paracentrotus lividus GN=ND4 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11 Identity = 44/132 (33.33%), Postives = 69/132 (52.27%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSV HM + I S T+ G NGA++ +I++GL+S+ LF LA T Y+R L GL +P + ++S A+L LP + E+++ +I + +L P ++ + I IYS Sbjct: 287 KALIAYSSVGHMSIVAAAIFSSTNWGTNGALILMIAYGLVSSDLFSLANTVYERSGTRTLAITRGLKTILPLSTLWWLVMSAANLGLPPSPNLIGEILILSSLI-AWSIWLFP------IIGLATIFGAIYS 411
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON_MYCTU (NADH-quinone oxidoreductase subunit N OS=Mycobacterium tuberculosis GN=nuoN PE=3 SV=1) HSP 1 Score: 48.521 bits (114), Expect = 4.999e-11 Identity = 29/105 (27.62%), Postives = 51/105 (48.57%), Query Frame = -2 Query: 99 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAG-----TSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVF 398 K+ +AYSSV+H+GFI+ G+ + GL+ + ++++ + F + G A L GL P + + S+ +A +P SGFV++ VF Sbjct: 342 KRMLAYSSVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVF 446 HSP 2 Score: 38.1206 bits (87), Expect = 4.999e-11 Identity = 22/81 (27.16%), Postives = 39/81 (48.15%), Query Frame = -1 Query: 394 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYG-LIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 633 K+ +PFH+W+PD + A +A K+ A+G L+R+ LP H + P + + + T+ Q N+K+ Sbjct: 264 KVGAVPFHSWIPDVYQGAPTPITGFMAA-ATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKR 343
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON_MYCBO (NADH-quinone oxidoreductase subunit N OS=Mycobacterium bovis GN=nuoN PE=3 SV=1) HSP 1 Score: 48.521 bits (114), Expect = 4.999e-11 Identity = 29/105 (27.62%), Postives = 51/105 (48.57%), Query Frame = -2 Query: 99 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAG-----TSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVF 398 K+ +AYSSV+H+GFI+ G+ + GL+ + ++++ + F + G A L GL P + + S+ +A +P SGFV++ VF Sbjct: 342 KRMLAYSSVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVF 446 HSP 2 Score: 38.1206 bits (87), Expect = 4.999e-11 Identity = 22/81 (27.16%), Postives = 39/81 (48.15%), Query Frame = -1 Query: 394 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYG-LIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 633 K+ +PFH+W+PD + A +A K+ A+G L+R+ LP H + P + + + T+ Q N+K+ Sbjct: 264 KVGAVPFHSWIPDVYQGAPTPITGFMAA-ATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKR 343
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON1_HYDS0 (NADH-quinone oxidoreductase subunit N 1 OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=nuoN1 PE=3 SV=1) HSP 1 Score: 51.2174 bits (121), Expect = 8.439e-11 Identity = 30/125 (24.00%), Postives = 60/125 (48.00%), Query Frame = -2 Query: 27 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRF-AYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIG 398 K+ +AYSS++H G+I+ + S + GL A+ + + ++ F + + L E+GGL + F++ A L +P GFV + +VF G+ ++L +++ ++ G Sbjct: 304 KRLLAYSSIAHSGYILSVLSSNSSMGLKAAIYFVFVYSIMGLGAFLVLSVLEQSDEWNNQLSEIGGLYRNTGFLSISFAVFIFALLGIPPTIGFVGKALVFLGLAIKNIYWLGFVLILATAISTG 428 HSP 2 Score: 34.6538 bits (78), Expect = 8.439e-11 Identity = 22/85 (25.88%), Postives = 42/85 (49.41%), Query Frame = -1 Query: 394 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHS-IFSPWFM---IVGTVQIIYAASTSPGQRNLKK 636 +K+ IIPFH WLPD A+ + + G + G + L+P+ + ++S W + I+ + +I + + Q +LK+ Sbjct: 225 IKIGIIPFHFWLPD----AYTAAPTPITGFMASAGKLAFFIPLLRLVPYVNQYLYSSWMISVSILAAITMIVGNALALVQSDLKR 305
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON_ACIF2 (NADH-quinone oxidoreductase subunit N OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=nuoN PE=3 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 8.446e-11 Identity = 36/112 (32.14%), Postives = 58/112 (51.79%), Query Frame = -2 Query: 81 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFL------AGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITS 398 K+ +AYS++ H+GF++LGI + T+ GL A + + L+S A F + AG +RI D+ GLA P L I+ + +P GF A+L VF ++ + Sbjct: 297 KRMLAYSTIGHVGFMLLGIVAGTEAGLASAFFYTVVYTLMSLAGFGMILLVSRAGFEAERI-----DDFKGLAQRKPWYAFLMMIVMFSMAGVPPTVGFYAKLAVFQAVVAA 403 HSP 2 Score: 32.7278 bits (73), Expect = 8.446e-11 Identity = 25/83 (30.12%), Postives = 40/83 (48.19%), Query Frame = -1 Query: 394 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPW---FMIVGTVQIIYAASTSPGQRNLKK 633 KL PFH WLPD + A LA K+GA+ LI I + L+ + + W F+ + V ++ + Q+N+K+ Sbjct: 219 KLGAAPFHMWLPDVYQGAPTVVTAFLAS-APKIGAFALI-IRL-LVDGGYGMQESWQQIFVALTVVSLVVGNVIAIAQQNIKR 298 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |