CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_NYMAL (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Nymphaea alba GN=ndhD PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 9.425e-108 Identity = 106/132 (80.30%), Postives = 118/132 (89.39%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 KKRIAYSSVSHMGFII+GI SITD GLNGA+LQIISHG I AALFFLAGTSYDRIR YL+EMGG+AI +P+IFT+FS SMASLALPGMSGFVAE ++F GIITS K+ +M KI+ITFVMAIGMILTPIYS Sbjct: 302 KKRIAYSSVSHMGFIIIGISSITDAGLNGAILQIISHGFIGAALFFLAGTSYDRIRLRYLNEMGGIAILMPRIFTMFSSFSMASLALPGMSGFVAEFVIFLGIITSPKYLVMSKILITFVMAIGMILTPIYS 433 HSP 2 Score: 198.749 bits (504), Expect = 9.425e-108 Identity = 101/141 (71.63%), Postives = 106/141 (75.18%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNEPTLN ETL N+SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+R+NM LLPHAHSIFSPW MIVGT+QIIYAA TSPGQRNLKK+ Sbjct: 164 ATKFILYTAGGSIFLLMGVLGMGLYGSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRVNMELLPHAHSIFSPWLMIVGTIQIIYAALTSPGQRNLKKR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_ACOCL (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Acorus calamus GN=ndhD PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 3.564e-107 Identity = 108/131 (82.44%), Postives = 120/131 (91.60%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 KKRIAYSSVSHMGF I+GIGSITDTGLNGA+LQ++SHG + AALFFLAGTS DRIR YLDEMGG++IP+PKIFT+FS SMASLALPGMSGFVAE +VFFGIITSQKF +PKI+ITFVMAIGMILTPIY Sbjct: 302 KKRIAYSSVSHMGFTIIGIGSITDTGLNGAILQLLSHGFLGAALFFLAGTSCDRIRLIYLDEMGGISIPMPKIFTMFSSFSMASLALPGMSGFVAEAVVFFGIITSQKFLFLPKILITFVMAIGMILTPIY 432 HSP 2 Score: 188.734 bits (478), Expect = 3.564e-107 Identity = 97/141 (68.79%), Postives = 104/141 (73.76%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNEPTLN ET N+SYPV+LE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINM LLPHAHSIFSPW ++ GT+QIIYAASTS GQ NLKK+ Sbjct: 164 ATKFILYTAGGSVFLLMGVPGMGLYGSNEPTLNFETSANQSYPVSLEILFYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLVLAGTLQIIYAASTSLGQVNLKKR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_ACOAM (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Acorus americanus GN=ndhD PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 3.564e-107 Identity = 108/131 (82.44%), Postives = 120/131 (91.60%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 KKRIAYSSVSHMGF I+GIGSITDTGLNGA+LQ++SHG + AALFFLAGTS DRIR YLDEMGG++IP+PKIFT+FS SMASLALPGMSGFVAE +VFFGIITSQKF +PKI+ITFVMAIGMILTPIY Sbjct: 302 KKRIAYSSVSHMGFTIIGIGSITDTGLNGAILQLLSHGFLGAALFFLAGTSCDRIRLIYLDEMGGISIPMPKIFTMFSSFSMASLALPGMSGFVAEAVVFFGIITSQKFLFLPKILITFVMAIGMILTPIY 432 HSP 2 Score: 188.734 bits (478), Expect = 3.564e-107 Identity = 97/141 (68.79%), Postives = 104/141 (73.76%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNEPTLN ET N+SYPV+LE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINM LLPHAHSIFSPW ++ GT+QIIYAASTS GQ NLKK+ Sbjct: 164 ATKFILYTAGGSVFLLMGVLGMGLYGSNEPTLNFETSANQSYPVSLEILFYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLVLAGTLQIIYAASTSLGQVNLKKR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_JASNU (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Jasminum nudiflorum GN=ndhD PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 6.067e-107 Identity = 108/132 (81.82%), Postives = 120/132 (90.91%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 KKRIAYSSVSHMGF+I+GIGSITD GL+GA+LQIISHG I AALFFLAGT+YDRIR YLDEMGG+AIP+PKIFT+FSI SMASLALPGMSGFV E IVFFG+ITS K+ LM KI+I FVMAIG+ILTPIYS Sbjct: 302 KKRIAYSSVSHMGFLIIGIGSITDIGLDGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIAIPMPKIFTMFSIFSMASLALPGMSGFVTEFIVFFGLITSPKYLLMAKILIPFVMAIGIILTPIYS 433 HSP 2 Score: 191.045 bits (484), Expect = 6.067e-107 Identity = 99/141 (70.21%), Postives = 104/141 (73.76%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNEPT NLE L N+SYPVALE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINM LL HAHS+FSPW MIVG +QIIYAASTS GQRNLKK+ Sbjct: 164 ATKFILYTAGGSVFLLMGALGIGLYGSNEPTFNLEILANQSYPVALERIFYIGFFIAFAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLSHAHSLFSPWLMIVGAMQIIYAASTSLGQRNLKKR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_NUPAD (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Nuphar advena GN=ndhD PE=3 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 1.033e-106 Identity = 106/132 (80.30%), Postives = 119/132 (90.15%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 KKRIAYSSVSHMGFII+GI SITD GLNGA+LQIISHG I AALFFLAGTSYDRIR YL+EMGG+AI +P+IFT+FS SMASLALPGMSGFVAEL++F GIITS K+ ++ KI+ITFVMAIGMILTPIYS Sbjct: 302 KKRIAYSSVSHMGFIIIGISSITDAGLNGAILQIISHGFIGAALFFLAGTSYDRIRLRYLNEMGGIAILMPRIFTMFSSFSMASLALPGMSGFVAELVIFLGIITSPKYLVVSKILITFVMAIGMILTPIYS 433 HSP 2 Score: 195.282 bits (495), Expect = 1.033e-106 Identity = 101/141 (71.63%), Postives = 105/141 (74.47%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNEP LN ETL N+SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINM LLPHAHSIFSPW MIVGT+QIIYAASTS GQRNLKK+ Sbjct: 164 ATKFILYTAGGSIFLLMGVLGMGLYGSNEPKLNFETLANQSYPVALEIIFYFGFLIAYAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSLGQRNLKKR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_LOTJA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Lotus japonicus GN=ndhD PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.347e-106 Identity = 110/132 (83.33%), Postives = 125/132 (94.70%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 KKRIAYSSVSHMGF+I+GIGSI+DTGLNGA+LQIISHG I AALFFL+GTSYDR+R YLDEMGG+A+P+PKIFT+F+ILSMASLALPGMSGF AELIVF+GIITSQK+FL+ KI+ITFV AIGMILTPIYS Sbjct: 302 KKRIAYSSVSHMGFLIIGIGSISDTGLNGAILQIISHGFIGAALFFLSGTSYDRLRLLYLDEMGGMALPMPKIFTVFTILSMASLALPGMSGFFAELIVFWGIITSQKYFLIMKILITFVTAIGMILTPIYS 433 HSP 2 Score: 184.111 bits (466), Expect = 1.347e-106 Identity = 95/141 (67.38%), Postives = 102/141 (72.34%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNEPTLN ETL N+SYP+ALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINM L HAHSIF PW MI+G++QIIYAAS S GQRNLKK+ Sbjct: 164 ATKFILYTAGSSVFLLMATLGIGLYGSNEPTLNFETLNNQSYPLALEIIVYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELFSHAHSIFCPWLMILGSIQIIYAASASLGQRNLKKR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_SOYBN (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Glycine max GN=ndhD PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.905e-106 Identity = 111/132 (84.09%), Postives = 123/132 (93.18%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 KKRIAYSSVSHMGF++LGIGSI+DTGLNGA+LQIISHG I AALFFLAGTSYDR+R YLDEMGG+AIP+PKIFT+F+ILSMASLALPGMSGFVAELIV GIITSQK+ L+ KI+ITFV AIGMILTPIYS Sbjct: 302 KKRIAYSSVSHMGFLLLGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRLRLLYLDEMGGMAIPMPKIFTVFTILSMASLALPGMSGFVAELIVLLGIITSQKYLLITKILITFVTAIGMILTPIYS 433 HSP 2 Score: 183.341 bits (464), Expect = 3.905e-106 Identity = 94/141 (66.67%), Postives = 103/141 (73.05%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNEPTLN E+L N+SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINM L AHSIFSPW +++G++QIIYAASTS GQRNLKK+ Sbjct: 164 ATKFILYTAGSSVFLLLGILGMSFYSSNEPTLNFESLTNQSYPVALEIIFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFLSRAHSIFSPWLILLGSIQIIYAASTSLGQRNLKKR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_MANES (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Manihot esculenta GN=ndhD PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 4.278e-105 Identity = 108/131 (82.44%), Postives = 117/131 (89.31%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 KKRIAYSSVSHMGFII+GI SI+D GLNGA+LQIISHG I AALFFLAGT YDRIR YLDEMGG+A +PKIFT FSILS+ASLALPGMSGF AELIVFFGIIT QK+ LM KI+ITFVMA+GMILTPIY Sbjct: 302 KKRIAYSSVSHMGFIIIGICSISDMGLNGAILQIISHGFIGAALFFLAGTGYDRIRRVYLDEMGGMATSMPKIFTTFSILSLASLALPGMSGFFAELIVFFGIITGQKYLLMSKILITFVMAVGMILTPIY 432 HSP 2 Score: 189.119 bits (479), Expect = 4.278e-105 Identity = 97/141 (68.79%), Postives = 103/141 (73.05%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNEP + ET N+SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINM LLPHAHSIFSPW +IVG +QIIYAASTSPGQRNLKK+ Sbjct: 164 ATKFILYTAGGSVFLLMGALGIALYGSNEPRFHFETSANQSYPVALEIFFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLIIVGVMQIIYAASTSPGQRNLKKR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_PHAVU (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Phaseolus vulgaris GN=ndhD PE=2 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 4.278e-105 Identity = 109/132 (82.58%), Postives = 122/132 (92.42%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 KKRIAYSSVSHMGF+ILGIGSI++TGLNGA+LQIISHG I AALFFLAGTSYDR+R YLDEMGG+AIP+PKIFT+F+ LSMASLALPGMSGFVAELIV GIIT+QK+ L+ KI+ITFV AIGMILTPIYS Sbjct: 302 KKRIAYSSVSHMGFLILGIGSISETGLNGAILQIISHGFIGAALFFLAGTSYDRLRLLYLDEMGGMAIPMPKIFTIFTTLSMASLALPGMSGFVAELIVLLGIITNQKYLLITKILITFVTAIGMILTPIYS 433 HSP 2 Score: 183.341 bits (464), Expect = 4.278e-105 Identity = 94/141 (66.67%), Postives = 103/141 (73.05%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNEPTLN E+L N+SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINM LL AHSIF PW M++G++QIIYAASTS GQRN+KK+ Sbjct: 164 ATKFILYTAGSSVFLLLGILGMSLYSSNEPTLNFESLTNQSYPVALEIIFYMGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLSRAHSIFCPWLMLLGSIQIIYAASTSLGQRNVKKR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_AMBTC (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Amborella trichopoda GN=ndhD PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 2.753e-104 Identity = 107/131 (81.68%), Postives = 117/131 (89.31%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 KKRIAYSSVSHMG I+GIGS+TDT LNGA+LQIISHG I AALFFLAGTSYDRIRF YLDEMGG+AIP+PKIFT+FSI SMASLA PGMSGFVAE +VF GIITS K+ +PKI+IT VMAIGMILTPIY Sbjct: 302 KKRIAYSSVSHMGSTIIGIGSMTDTALNGAILQIISHGFIGAALFFLAGTSYDRIRFLYLDEMGGIAIPMPKIFTMFSIFSMASLASPGMSGFVAEFLVFLGIITSPKYLFIPKILITVVMAIGMILTPIY 432 HSP 2 Score: 185.267 bits (469), Expect = 2.753e-104 Identity = 95/141 (67.38%), Postives = 102/141 (72.34%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SN+P LN ET N+SYPV LE A K PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINM LLPHAHS+FSPW +IVGT+QIIYAASTS GQRNLKK+ Sbjct: 164 ATKFILYTAGGSIFLLIGVLGMGLYSSNQPMLNFETSANQSYPVGLEILFYFGFLIAYAAKPPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSLFSPWLVIVGTLQIIYAASTSLGQRNLKKR 304 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |