CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_ANTFO (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Anthoceros formosae GN=ndhD PE=2 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 1.165e-90 Identity = 89/131 (67.94%), Postives = 110/131 (83.97%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+RIAYSSVSHMGF+++GIGS TD G+NGA+LQ+ISHGLI AALFF AG +YDR R +L++MGG+A IPKIFT+FS SMASLALPG+SGFVAEL++F GI++SQ F + K+VI V A G+ILTPIY Sbjct: 302 KRRIAYSSVSHMGFVLIGIGSTTDIGVNGAILQMISHGLIGAALFFSAGVTYDRTRTLFLNQMGGIATSIPKIFTMFSSFSMASLALPGLSGFVAELMIFLGIVSSQNFSFLFKVVIIIVAATGIILTPIY 432 HSP 2 Score: 169.859 bits (429), Expect = 1.165e-90 Identity = 84/141 (59.57%), Postives = 98/141 (69.50%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA S+ PTL+ E L NRSYP+ LE AVKLP++P HTWLPDTHGEAHYSTCMLLAGILLKMG YGLIRINM LL HAHSIF+PW +++G +QI+Y+A TS Q NLK++ Sbjct: 164 ATKFILYTAGSSVFLLMGALTMGLYGSDGPTLDFENLANRSYPIGLEIILYLGFFIAYAVKLPMVPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGLIRINMELLSHAHSIFAPWLVVIGAIQIVYSALTSLSQLNLKRR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_MARPO (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Marchantia polymorpha GN=ndhD PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.165e-90 Identity = 86/131 (65.65%), Postives = 108/131 (82.44%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+RIAYSSVSHMGF+++GIGSIT+ GLNGA+LQ+ISHGLI A+LFFLAG SYDR R LD+MGG+ +PKIFTLF+ SMASLALPGMSGF+AEL++F G+I + + + KI+I + IG+ILTPIY Sbjct: 302 KRRIAYSSVSHMGFVLIGIGSITNLGLNGAILQMISHGLIGASLFFLAGISYDRTRTLVLDQMGGIGNSMPKIFTLFTSCSMASLALPGMSGFIAELMIFLGVIDNPNYSSLFKIIIIIIQGIGIILTPIY 432 HSP 2 Score: 175.637 bits (444), Expect = 1.165e-90 Identity = 89/141 (63.12%), Postives = 100/141 (70.92%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNE T + + L+N+ YP+ LE AVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINM LLPHAHS F+PW +IVG +QI+YAA TS QRNLK++ Sbjct: 164 ATKFILYTAAGSLFILIGGLIMAFYNSNEFTFDFQFLINKKYPLELEIIIYLSFLIAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSFFAPWLVIVGAIQIVYAALTSLSQRNLKRR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_HUPLU (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Huperzia lucidula GN=ndhD PE=3 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 9.773e-90 Identity = 89/141 (63.12%), Postives = 98/141 (69.50%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA +EPTL+ + L NRSYP+ALE AVKLPI P HTWLPDTHGEAHYSTCMLLAGILLKMG YGLIRINM LLPHAHSIF+PW +IVG QI+YAAS S QRN K++ Sbjct: 166 ATKFILYTAGGSIPLLIGALTMGLHGFDEPTLDFQNLANRSYPIALEIVLYLSFFVAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGLIRINMELLPHAHSIFAPWLVIVGAFQIVYAASISSSQRNSKRR 306 HSP 2 Score: 172.94 bits (437), Expect = 9.773e-90 Identity = 86/131 (65.65%), Postives = 106/131 (80.92%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+RIAYSS+SHMGF+++GIGS T+ GLNGA+LQ+ISHGLI AA F LAGTSYDR R +LD+MGG+ +PK FT+FS SMASLALPG SGF AE +VF GI++ + + L KI+IT V AIG+ILTPIY Sbjct: 304 KRRIAYSSISHMGFVLIGIGSATNIGLNGAILQMISHGLIGAAPFSLAGTSYDRTRTPFLDQMGGIGTSMPKTFTMFSSFSMASLALPGTSGFAAESMVFPGIVSGKNYSLPFKIIITIVEAIGIILTPIY 434
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_PSINU (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Psilotum nudum GN=ndhD PE=3 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 6.300e-86 Identity = 87/131 (66.41%), Postives = 111/131 (84.73%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+RIAYSSVSHMGF+I+GI SITD G NGA+LQ+ISHGLI AALFFLAG SYDR + YLD++GG+A+P+P++FT+FS S+ASLALPGMS FVAE ++F GI+T+ + L+ K +I F+ AIG+ILTPIY Sbjct: 302 KRRIAYSSVSHMGFVIIGISSITDIGTNGAILQMISHGLIGAALFFLAGISYDRTQTLYLDQLGGIAVPMPRLFTMFSFFSLASLALPGMSSFVAEFLIFLGIVTNPYYSLIFKSIILFIGAIGVILTPIY 432 HSP 2 Score: 153.68 bits (387), Expect = 6.300e-86 Identity = 79/141 (56.03%), Postives = 94/141 (66.67%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 +TKF+LYTA SN + +L+ L NRSYP+A+E AVKLPI+PFHTWLPDTHGEAHYSTCMLLAGILLKMG YGLIRINM LLPHAH +FSP + +G VQI YA+ S N+K++ Sbjct: 164 STKFLLYTAGGSIFLLVGSLTMGLYGSNGTSFDLQILTNRSYPIAVETALYFSFLIAYAVKLPILPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGLIRINMELLPHAHFLFSPLLVTMGAVQIAYASLISFSLPNIKRR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_CHAGL (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Chaetosphaeridium globosum GN=ndhD PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.072e-85 Identity = 81/131 (61.83%), Postives = 107/131 (81.68%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+RIAYSS+SHMGF+++GI S TD GL+GA++Q++SHGLI A LFFLAGTSYDRIR +LD+MGG++ +PKIF +F+ ++ASLALPGMSGFVAEL+VF G + S + +ITF+ A+G+ILTPIY Sbjct: 303 KRRIAYSSISHMGFVMIGISSFTDLGLSGAMMQMVSHGLIGAGLFFLAGTSYDRIRTLFLDQMGGISTTMPKIFAMFTTCALASLALPGMSGFVAELMVFLGFLKSNAYSFDFIALITFLEAVGIILTPIY 433 HSP 2 Score: 166.392 bits (420), Expect = 1.072e-85 Identity = 84/141 (59.57%), Postives = 96/141 (68.09%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SN P L+ ++L N+ YP+ALE AVKLP P HTWLPDTHGEAHYSTCMLLAGIL+KMG YGLIRINM LLP+AH IFSPW ++G +QIIY A TS GQRNLK++ Sbjct: 165 ATKFILYTAVGSIFILMAGLTMAFYNSNVPLLDFQSLANKQYPLALEIVLYLGFLIAFAVKLPAFPLHTWLPDTHGEAHYSTCMLLAGILIKMGGYGLIRINMELLPNAHVIFSPWIALIGGIQIIYGALTSLGQRNLKRR 305
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_ADICA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Adiantum capillus-veneris GN=ndhD PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 4.048e-85 Identity = 86/131 (65.65%), Postives = 108/131 (82.44%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+RIAYSS+SHMGF+ +GIGS T+TG+NGA+LQ+ISHGLI AALFFLAGT YDR R LD++GG AI +PK+FT+FS LS+ASLALPGMSGFV+EL+VF G++TS ++ K IT + IG +LTPIY Sbjct: 303 KRRIAYSSISHMGFVTIGIGSFTETGINGAILQMISHGLIGAALFFLAGTCYDRTRTYLLDQLGGAAISMPKLFTMFSTLSLASLALPGMSGFVSELLVFLGVVTSNQYSFAFKAGITVLEGIGTVLTPIY 433 HSP 2 Score: 155.992 bits (393), Expect = 4.048e-85 Identity = 76/141 (53.90%), Postives = 93/141 (65.96%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKF+LYTA S P+ N++ L+++SYP++LE AVKLPI PFHTWLPDTHGEAHYSTCMLLAG+LLKMG YGLIRIN+ LL HAH + W M+ G +QIIYA+ S QRN K++ Sbjct: 165 ATKFVLYTAGGSIFLLVAALTMSFYGSEVPSFNIQDLIHKSYPLSLEVLIYVGFLVAYAVKLPIFPFHTWLPDTHGEAHYSTCMLLAGVLLKMGGYGLIRINLELLTHAHFLLGSWMMLFGAIQIIYASLISMSQRNFKRR 305
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_ZYGCR (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Zygnema circumcarinatum GN=ndhD PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.843e-83 Identity = 82/131 (62.60%), Postives = 107/131 (81.68%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+RIAYSSVSHMGF+++G GS++D GL+GA+LQ+ISHGLI A+LFFLAGTSYDR R L EMG A +PK+F +F+ +MASLALPGMSGFV+EL+VFFG++TS + + +IT + A+G+ILTPIY Sbjct: 302 KRRIAYSSVSHMGFVLVGAGSLSDLGLSGAMLQMISHGLIGASLFFLAGTSYDRTRTLMLREMGAWASQMPKMFAMFTTCAMASLALPGMSGFVSELMVFFGMVTSAAYSPYFRAIITLIEAVGIILTPIY 432 HSP 2 Score: 160.614 bits (405), Expect = 2.843e-83 Identity = 80/141 (56.74%), Postives = 93/141 (65.96%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SN P L+ E L ++SYP+ LE AVKLP P HTWLPDTHGEAHYSTCMLLAGILLKMG YG IR+NM LLPHAH++F+PW + +G QI+YAA S QRNLK++ Sbjct: 164 ATKFILYTAGGSIFLLAGLLTASLWGSNAPVLDFEILSHKSYPLGLEILIYLGFLIAYAVKLPAFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGFIRVNMELLPHAHTVFAPWLVALGAYQIVYAALVSFAQRNLKRR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_STAPU (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Staurastrum punctulatum GN=ndhD PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.107e-82 Identity = 83/131 (63.36%), Postives = 104/131 (79.39%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+RIAYSSVSHMGF+++G GS +D GL+GA+LQ+ISHGLI A LFFLAGT+YDR R LD+MGG P+PK F+ F+ +MASLALPGMSGFVAEL++F GI+ S + + K +IT V IG+ILTPIY Sbjct: 302 KRRIAYSSVSHMGFVLIGAGSFSDLGLSGAILQMISHGLIGAGLFFLAGTTYDRSRTLILDDMGGWGSPLPKTFSTFTACAMASLALPGMSGFVAELMIFLGIVASSVYSPLFKAIITCVEGIGIILTPIY 432 HSP 2 Score: 155.606 bits (392), Expect = 3.107e-82 Identity = 78/141 (55.32%), Postives = 92/141 (65.25%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA N P L++ETL +SYP+ LE AVKLP+ PFHTWLPDTHGEAHYSTCMLLAGILLKMG YG IRIN+ +L AH IF+PW + +G QI+YAA S Q+NLK++ Sbjct: 164 ATKFILYTAGGSIFLLAAILTISLWGPNGPILDMETLSKQSYPLGLEILVYLGFLIAYAVKLPVFPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGFIRINIEMLSDAHRIFAPWLVALGAGQIVYAALVSIAQKNLKRR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_NEPOL (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Nephroselmis olivacea GN=ndhD PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.108e-82 Identity = 82/131 (62.60%), Postives = 108/131 (82.44%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSSVSHMGF+++GIGS+++ GLNGA+LQ+ISHGLI A+LFFLAGT+YDR R L+EMGGLA +PK F LF+ S+ASLALPGMSGF AEL+VF G++TS+ + + ++T AIG++LTPIY Sbjct: 302 KRKIAYSSVSHMGFVLIGIGSLSEAGLNGAMLQMISHGLIGASLFFLAGTTYDRTRTLVLEEMGGLATFMPKTFALFTACSLASLALPGMSGFFAELLVFLGLVTSEAYSPTFRAIMTVFEAIGILLTPIY 432 HSP 2 Score: 155.606 bits (392), Expect = 3.108e-82 Identity = 80/141 (56.74%), Postives = 89/141 (63.12%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA T ++ TL R Y + +E VKLP IP HTWLPDTHGEAHYSTCMLLAGILLKMG Y LIRINM +LPHAH++FSPW + VG V IIYAA TS QRNLK+K Sbjct: 164 ATKFILYTALGSIFILLGALTMPFMGIQGVTFDMSTLAYREYSLPVEILLYTGFLIAYGVKLPAIPVHTWLPDTHGEAHYSTCMLLAGILLKMGGYALIRINMNMLPHAHALFSPWLIGVGVVNIIYAALTSFAQRNLKRK 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_CHAVU (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Chara vulgaris GN=ndhD PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 6.315e-80 Identity = 78/131 (59.54%), Postives = 105/131 (80.15%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+RIAYSS+SHMGF+++GI S T+ GL+GA+ Q+ISHGLI A+LFFLAGT+YDRIR L EMGG+A+ +PK+F++F+ S+ASLALP MSGFVAE+++F GII+S + + I A+G+ILTPIY Sbjct: 302 KRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFLGIISSTFYSPSFRCFIILFQALGVILTPIY 432 HSP 2 Score: 157.918 bits (398), Expect = 6.315e-80 Identity = 81/141 (57.45%), Postives = 92/141 (65.25%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFI YTA +N T + E L + YP LE AVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMG YG IRINM L P+AH+ F+PW +I+GTVQIIYAAS Q+NLK++ Sbjct: 164 ATKFIFYTAIGSLFLFIATFTVCFYGANIATWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRR 304 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |