CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_CHLAT (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Chlorokybus atmophyticus GN=ndhD PE=3 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 6.898e-79 Identity = 84/131 (64.12%), Postives = 107/131 (81.68%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSSVSHMGF+++GIGS+T+ GL+GAVLQ+ISHGLI A+LFFLAGT+YDR R L++MGG+A +PK F +F+ S+ASLALPGMSGFVAEL+VF G TS + K +ITF+ IG+ILTPIY Sbjct: 301 KRKIAYSSVSHMGFVLIGIGSLTNLGLSGAVLQMISHGLIGASLFFLAGTTYDRTRTLILEDMGGVAKKMPKTFAMFTTCSLASLALPGMSGFVAELMVFLGFATSASYSFEFKAIITFLEGIGIILTPIY 431 HSP 2 Score: 142.895 bits (359), Expect = 6.898e-79 Identity = 76/141 (53.90%), Postives = 90/141 (63.83%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + T ++ L + YP+ LE AVKLP P HTWLPDTHGEAHYSTCMLLAGILLKMG Y LIRINM +LP+AH IF+P+ +I+G + IIYAA TS QRN+K+K Sbjct: 164 ATKFILYTAIGSIFILLAGLTMAFYG-DIVTFDMRALKLKEYPLNLEILLYIGFLIAYAVKLPAFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYALIRINMDMLPNAHLIFAPFLIIIGVINIIYAALTSFAQRNMKRK 303
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_MESVI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Mesostigma viride GN=ndhD PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 9.829e-78 Identity = 80/131 (61.07%), Postives = 107/131 (81.68%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++GI S TD GL+GA+LQ++SHGLI A+LFFLAGT+YDR R L++MGG+A +PKIF +F+ S+ASLALPGMSGFVAEL+VF G S + + + +ITF+ AIG+I+TPIY Sbjct: 301 KRKIAYSSISHMGFVLIGISSFTDIGLSGAMLQMVSHGLIGASLFFLAGTTYDRTRTLILEDMGGIAKYMPKIFAMFTTCSLASLALPGMSGFVAELMVFLGFANSNAYSIEFRGIITFLEAIGIIVTPIY 431 HSP 2 Score: 143.665 bits (361), Expect = 9.829e-78 Identity = 75/141 (53.19%), Postives = 89/141 (63.12%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA N + +++ L + YP+ LE AVKLP P HTWLPDTHGEAHYSTCMLLAGILLKMG Y LIRINM +LP+AH F+P+ I+G + IIYAA TS QRN+K+K Sbjct: 164 ATKFILYTALGSIFILIAAFGMAFYGENM-SFDMQILGEKEYPINLEILFYICFLIAYAVKLPAFPVHTWLPDTHGEAHYSTCMLLAGILLKMGGYALIRINMNMLPNAHIYFAPYLAIIGVINIIYAALTSFAQRNIKRK 303
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C1_ANAVT (NAD(P)H-quinone oxidoreductase chain 4 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndhD1 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 3.383e-72 Identity = 81/131 (61.83%), Postives = 103/131 (78.63%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+I+G S TD GL+GAVLQ++SHGLI A+LFFL G +YDR LDEMGG+ +PKIF +F+ SMASLALPGMSGFVAEL+VF G TS + K+++ F+MA+G+ILTPIY Sbjct: 303 KRKIAYSSISHMGFVIIGFASFTDLGLSGAVLQMVSHGLIGASLFFLVGATYDRTHTLMLDEMGGVGKRMPKIFAMFTACSMASLALPGMSGFVAELMVFVGFATSDAYSSTFKVIVVFLMAVGVILTPIY 433 HSP 2 Score: 122.479 bits (306), Expect = 3.383e-72 Identity = 68/141 (48.23%), Postives = 83/141 (58.87%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA N T ++ +L + Y + + A+KLPIIP HTWLPD HGEA MLLAGILLKMG Y LIR+N G+LP AH+ F+P +++G V IIYAA TS QRNLK+K Sbjct: 166 ATKFILYTAGGSLFILLAALTMAFYGDNV-TFDMRSLALKDYALNFQLLLYAGFLIAYAIKLPIIPLHTWLPDAHGEATAPAHMLLAGILLKMGGYALIRMNAGILPDAHAYFAPVLVVLGVVNIIYAALTSFAQRNLKRK 305
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C2_ANASP (NAD(P)H-quinone oxidoreductase chain 4-2 OS=Anabaena sp. (strain PCC 7120) GN=ndhD2 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.276e-71 Identity = 81/131 (61.83%), Postives = 103/131 (78.63%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+I+G S TD GL+GAVLQ++SHGLI A+LFFL G +YDR LDEMGG+ +PKIF +F+ SMASLALPGMSGFVAEL+VF G TS + K+++ F+MA+G+ILTPIY Sbjct: 303 KRKIAYSSISHMGFVIIGFASFTDLGLSGAVLQMVSHGLIGASLFFLVGATYDRTHTLMLDEMGGVGKRMPKIFAMFTACSMASLALPGMSGFVAELMVFVGFATSDAYSSTFKVIVVFLMAVGVILTPIY 433 HSP 2 Score: 120.553 bits (301), Expect = 1.276e-71 Identity = 67/141 (47.52%), Postives = 83/141 (58.87%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + T ++ +L + Y + + A+KLPIIP HTWLPD HGEA MLLAGILLKMG Y LIR+N G+LP AH+ F+P +++G V IIYAA TS QRNLK+K Sbjct: 166 ATKFILYTAGGSLFILLASLTMAFYG-DTVTFDMRSLALKDYALNFQLLLYAGFLIAYAIKLPIIPLHTWLPDAHGEATAPAHMLLAGILLKMGGYALIRMNAGILPDAHAYFAPVLVVLGVVNIIYAALTSFAQRNLKRK 305
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_ACAM1 (NAD(P)H-quinone oxidoreductase chain 4 OS=Acaryochloris marina (strain MBIC 11017) GN=ndhD PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.830e-71 Identity = 78/131 (59.54%), Postives = 103/131 (78.63%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++GI S TD G++GAVLQ++SHGLI A+LFFL G +YDR L+EMGG+A +PKIF +F+ SMASLALPGMSGFVAEL+VF G+ TS + L ++ + + IG+ILTPIY Sbjct: 305 KRKIAYSSISHMGFVLIGIASFTDLGMSGAVLQMVSHGLIGASLFFLVGATYDRTHTLILEEMGGVAQNMPKIFAMFTTCSMASLALPGMSGFVAELMVFVGLATSDAYSLAFRVPVVILAGIGVILTPIY 435 HSP 2 Score: 125.176 bits (313), Expect = 2.830e-71 Identity = 70/141 (49.65%), Postives = 85/141 (60.28%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + T +L++L + YP+ + AVKLPI+P HTWLPD HGEA MLLAGILLKMG Y LIR+N+ LLP AH+ F+P +I+G V IIYAA TS QRNLK+K Sbjct: 168 ATKFILYTAISSLFILVAALAMAFFGP-DLTFDLQSLAAKDYPLTFQLLCYTGFLVAFAVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALIRMNVELLPDAHAYFAPALIILGVVNIIYAALTSFAQRNLKRK 307
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C2_SYNJA (NAD(P)H-quinone oxidoreductase chain 4 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=ndhD2 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.068e-70 Identity = 77/131 (58.78%), Postives = 109/131 (83.21%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++GIGS+T+ G++GA+LQ+ISHGLI A+LFFL G +YDR L+EMGG+ + +PKIF++F+ S+ASLALPGMSGFVAEL+VF G+ T+ + L ++V+ F+ A+G+ILTPIY Sbjct: 318 KRKIAYSSISHMGFVLIGIGSLTEIGMSGAMLQMISHGLIGASLFFLVGATYDRTHTLELEEMGGVGLKMPKIFSMFTACSLASLALPGMSGFVAELMVFIGMATTDAYSLPFRLVVVFLAAVGVILTPIY 448 HSP 2 Score: 119.013 bits (297), Expect = 1.068e-70 Identity = 63/141 (44.68%), Postives = 84/141 (59.57%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + + ++ L +++YP++ + VKLP+ P HTWLPD HGEA MLLAGILLKMG Y L+R+N+G+LP AH F+P +++G V II+AA TS QRNLK+K Sbjct: 181 ATKFILYTALSSLFILVAGLAMAFYG-DPISFDMTDLAHKAYPLSFQLLLYGAFLIAYGVKLPVFPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALMRMNVGMLPDAHLYFAPVLIVLGVVNIIFAALTSFAQRNLKRK 320
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C2_MICAN (NAD(P)H-quinone oxidoreductase chain 4 2 OS=Microcystis aeruginosa (strain NIES-843) GN=ndhD2 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 6.848e-70 Identity = 75/131 (57.25%), Postives = 103/131 (78.63%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+R+AYSSVSHMGF++LGI S TD G++GA+LQ++SHGLI+A LFFLAG +YDR L+EMGG+A +PK+F LF+ +MASLALPGMSGF +E+ VF G+ +S + ++V F+ ++G+ILTPIY Sbjct: 304 KRRLAYSSVSHMGFVLLGIASFTDVGISGAMLQMLSHGLIAAVLFFLAGVTYDRTHTLALNEMGGIAQAMPKVFALFTAGAMASLALPGMSGFASEITVFIGVTSSDVYSQTFRVVTVFLASVGLILTPIY 434 HSP 2 Score: 124.79 bits (312), Expect = 6.848e-70 Identity = 66/141 (46.81%), Postives = 80/141 (56.74%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKF+LYTA T ++ L + YP+ALE VKL I P HTWLPD HGEA M+LAG+LLKMG YGLIR+NMGLLP AH F+P I+G V IIY A S GQ+N+K++ Sbjct: 166 ATKFLLYTAAASIFILVAGLAMALYGGGAMTFDMAELGFKDYPLALELVLYAGLLIAFGVKLAIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYGLIRLNMGLLPDAHIYFAPILAILGVVNIIYGAFASFGQQNMKRR 306
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C1_MICAN (NAD(P)H-quinone oxidoreductase chain 4 1 OS=Microcystis aeruginosa (strain NIES-843) GN=ndhD1 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.584e-69 Identity = 74/131 (56.49%), Postives = 101/131 (77.10%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++G+ S TD G +GA+LQ+ISHGLI A+LFF+ G +YDR LDEMGG+ + K+F +++ S+ASLALPGMSGFVAEL+VF G TS + +++I F+ AIG+ILTPIY Sbjct: 303 KRKIAYSSISHMGFVLIGMASFTDIGTSGAMLQMISHGLIGASLFFMVGCTYDRTHTLMLDEMGGVGKKMKKVFAMWTTCSLASLALPGMSGFVAELMVFIGFATSDAYSPTFRVIIVFLAAIGVILTPIY 433 HSP 2 Score: 125.946 bits (315), Expect = 2.584e-69 Identity = 67/141 (47.52%), Postives = 85/141 (60.28%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + + ++ T+ + +P+ L+ VKLPI P HTWLPD HGEA MLLAGILLKMG Y L+R+NMG+LP AH++F+P +I+G V IIYAA TS QRNLK+K Sbjct: 166 ATKFILYTAGGSLFILVAALTMAFYG-DTVSFDMVTIAGKDFPLKLQLFLYAGFLIAYGVKLPIFPLHTWLPDAHGEATAPAHMLLAGILLKMGGYALLRMNMGMLPDAHAVFAPVLVILGVVNIIYAALTSFAQRNLKRK 305
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C2_SYNJB (NAD(P)H-quinone oxidoreductase chain 4 2 OS=Synechococcus sp. GN=ndhD2 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 3.369e-69 Identity = 75/131 (57.25%), Postives = 108/131 (82.44%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IA SS+SHMGF+++GIGS+T+ G++GA+LQ+ISHGLI A+LFFL G +YDR L+EMGG+ + +PKIF++F+ S+ASLALPGMSGFVAE++VF G+ T+ + L ++V+ F+ A+G+ILTPIY Sbjct: 318 KRKIACSSISHMGFVLIGIGSLTEIGMSGAMLQMISHGLIGASLFFLVGATYDRTHTLELEEMGGVGLKMPKIFSMFTACSLASLALPGMSGFVAEIMVFIGMATTDAYSLPFRLVVVFLAAVGVILTPIY 448 HSP 2 Score: 118.242 bits (295), Expect = 3.369e-69 Identity = 64/141 (45.39%), Postives = 82/141 (58.16%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + + ++ L +++YP+ + VKLPI P HTWLPD HGEA MLLAGILLKMG Y L+R+N G+LP AH F+P +++G V II+AA TS QRNLK+K Sbjct: 181 ATKFILYTALSSLFILVAGLAMAFYG-DPISFDMTDLAHKTYPLTFQLLMYGAFLIAYGVKLPIFPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALMRMNAGMLPDAHLYFAPVLIVLGVVNIIFAALTSFAQRNLKRK 320
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C1_TRIEI (NAD(P)H-quinone oxidoreductase chain 4 1 OS=Trichodesmium erythraeum (strain IMS101) GN=ndhD1 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.745e-69 Identity = 76/131 (58.02%), Postives = 102/131 (77.86%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++G+ S TD GL+GAVLQ+ISHGLI A+LFFL G +YDR LDEMGG+ + K+F +++ SMASLALPGMSGFVAE++VF G TS + K+++ F+ A+G+ILTPIY Sbjct: 302 KRKIAYSSISHMGFVLIGMASFTDIGLSGAVLQMISHGLIGASLFFLVGATYDRTHTLILDEMGGVGQKMKKVFAMWTTCSMASLALPGMSGFVAEVMVFIGFATSDAYSSTFKVLVIFLSAVGVILTPIY 432 HSP 2 Score: 120.168 bits (300), Expect = 9.745e-69 Identity = 66/141 (46.81%), Postives = 83/141 (58.87%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + + ++ T+ + Y L+ AVKLPI P HTWLPD HGEA MLLAGILLKMG Y L+R+N G+LP AH++F+P +I+G V I+YAA TS QRNLK+K Sbjct: 165 ATKFILYTAGGSLFILIAALTMAFYG-DTVSFDMRTIALKDYAFNLQLLLYAAFLIAYAVKLPIFPLHTWLPDAHGEATAPAHMLLAGILLKMGGYALLRMNAGMLPDAHAVFAPVLVILGVVNIVYAALTSFAQRNLKRK 304 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |