CK933903

Overview
NameCK933903
Unique NameCK933903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933903_ssr242 microsatellite CK933903_ssr242:242..253. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1886 contig Csv1_Contig1886:3..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: YXJF_BACSU (Uncharacterized oxidoreductase yxjF OS=Bacillus subtilis GN=yxjF PE=3 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 6.363e-33
Identity = 90/259 (34.75%), Postives = 140/259 (54.05%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEP----------EDIAEAALYLGSDESKCVSGHNLVVDGGF 841
            ++ +VAL+TG A GIG   AR F++ GA V+++D++ +  E     +           Y   DVTKE  + + VN    QYG+LDI+ NNAG +  V P I +     FE+++ + L   F+  KH   +MK    G II+ ASV G++G A   AY S+KHG++GL K  A+E    GI VN + P  V T L ++ L          Y ++   V+ P          ++IA+ A++L S+++K V+G  +V+DGG+
Sbjct:    1 MRKQVALVTGAAGGIGFEIAREFAREGASVIVSDLRPEACEKAASKLAEEGFDAAAIPY---DVTKEAQVADTVNVIQKQYGRLDILVNNAG-IQHVAP-IEEFPTDTFEQLIKVMLTAPFIAMKHVFPIMKKQQFGRIINIASVNGLVGFAGKSAYNSAKHGVIGLTKVGALEGAPHGITVNALCPGYVDTQLVRNQLSDLSKTRNVPYDSVLEQVIFPLVPQKRLLSVKEIADYAVFLASEKAKGVTGQAVVLDGGY 254          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: LVR_LEIAQ (Levodione reductase OS=Leifsonia aquatica GN=lvr PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.417e-32
Identity = 86/256 (33.59%), Postives = 135/256 (52.73%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADD------GLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            R   +V LITGG  G+G  TA   +  GAK+ + D+  + G    K                 DV+ E  +E  V     ++G++D  FNNAG   E K N  ++   AEF++++SINL G FLG +   ++M+  G G +++TASV GI G      YA++KHG++GL +N+AVE GR+GIR+N ++P  + TP+ ++ +K  D           +  N      E  +IA    +L SD++  V+   + +DGG
Sbjct:   10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSE-GLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGI--EGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG 262          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.851e-32
Identity = 88/253 (34.78%), Postives = 137/253 (54.15%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAI 847
            RL+GKV LITG A GIG+ T  LF++ GA V+  DI  +  +S+ K+            YV  +VT    I+  V   V +YG++D++ NNAG   +    ++   + +++ ++++NL G F  T+     M     GSI++ +SV GI G      YA+SK G++G+ K  A EL    IRVN V+P  + TP+ +   KL +       S +  G   +PE++A+  L+L SDES  V+G  + +DGG  I
Sbjct:    2 RLEGKVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDP--YV-LNVTDRDQIKEVVEKVVQKYGRIDVLVNNAGITRDAL--LVRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMTE---KLPEKARETALSRIPLGRFGKPEEVAQVILFLASDESSYVTGQVIGIDGGLVI 246          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: LINC_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linC PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.418e-32
Identity = 89/258 (34.50%), Postives = 129/258 (50.00%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAG-RGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLK-----GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIV 850
            L GK  ++TGG  GIG  T  L    GA V +ADI D+ GE+V               Y  CD+ +E+D++  V   +  +G LD  FNNA       P + +     F + + IN+ G FL  K+    M   G +GSI++TAS  G++G      Y  +KH ++GL +  A + G+ GIRVN + P  V TP+    L+ A D   G+   L      G   EP + A+AA++L SD +  V+G  L  DGGF  +
Sbjct:    4 LSGKTIIVTGGGSGIGRATVELLVASGANVPVADINDEAGEAVVAT------SGGKAAYFRCDIAQEEDVKALVAQTLAAFGGLDGSFNNAAIPQAGLP-LAEVSLERFRQSMDINVTGTFLCMKYQILAMIERGTKGSIVNTASAAGVVGVPMHGEYVGAKHAVVGLTRVAAADYGKHGIRVNALVPGAVRTPM----LQRAMDNDAGLEPYLNSIHPIGRFSEPHEQAQAAVWLLSDAASFVTGSCLAADGGFTAI 250          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: YXBG_BACSU (Uncharacterized oxidoreductase yxbG OS=Bacillus subtilis GN=yxbG PE=3 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.200e-31
Identity = 86/255 (33.73%), Postives = 133/255 (52.16%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLK------GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            RL+ K A+ITG A GIG+ TA +F+  GA+V+I DI  D  E     I             H DV+ E  ++   +      G +DI+FNNAG VD+    + +     F+RI++++L G FL +K+   +M   G GSII+T+S+ G         Y ++K G+  L K  A++  R GIRVN +SP  + TPL        +  +G  +          G + +P+++A  AL+L SD+S  V+G ++  DGG
Sbjct:    3 RLENKTAVITGAATGIGQATAEVFANEGARVIIGDINKDQMEETVDAIRKNGGQAESF---HLDVSDENSVKAFADQIKDACGTIDILFNNAG-VDQEGGKVHEYPVDLFDRIIAVDLRGTFLCSKYLIPLMLENG-GSIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNGIRVNSISPGTIETPLIDKLAGTKEQEMGEQFREANKWITPLGRLGQPKEMATVALFLASDDSSYVTGEDITADGG 252          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: BACC_BACAM (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus amyloliquefaciens GN=bacC PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.567e-31
Identity = 88/257 (34.24%), Postives = 141/257 (54.86%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLL--GLMKNTAVELGRFGIRVNCVSPYVVSTPL-AKDFLKLADDGLGGMYS-----NLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGF 841
            L  K  LITGGA GIG    + F    A V++ADI +  GE++ +             +V  D+T E   +NA+ +AV ++G LD++ NNAG   E+   I + + +++ ++L++NL G FL +KHA + M  +G+G+II+T SV G++      AY +SK G+L        ++ + +  IRVNCV P ++ TPL  K FL+  +  L  +       N    + +PE+IA   L+L SD S  ++G  +  DGG+
Sbjct:    3 LTDKTVLITGGASGIGYAAVQAFLNQQANVVVADIDEAQGEAMIRK-----ENNDRLHFVQTDITNEPACQNAILSAVDKFGGLDVLINNAGI--EIVAPIHEMELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQTDAFYRPSI-IAKHNIRVNCVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGY 251          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: Y1385_MYCBO (Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.047e-31
Identity = 79/249 (31.73%), Postives = 138/249 (55.42%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDF-LKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            L  + A+ITGGA+G+G    + F   GA+V++ D+  +  E   K +            V CDVT+  D++  + TAV ++G LD+M NNAG   +     +  +Q  F+++++++L G + GT+ AA +M+   RG+I++ +SV G +G      Y+++K G++G+ K  A EL   GIRVN ++P ++ + + +    ++ D  L  +     G   EP ++A  A++L SD S  ++G  L V GG
Sbjct:    5 LNARTAVITGGAQGLGLAIGQRFVAEGARVVLGDVNLEATEVAAKRLGGDDVALA----VRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRDATMRTMTEEQ--FDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQKLAEVPMGRAG---EPSEVASVAVFLASDLSSYMTGTVLDVTGG 244          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTU (Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium tuberculosis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.047e-31
Identity = 79/249 (31.73%), Postives = 138/249 (55.42%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDF-LKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            L  + A+ITGGA+G+G    + F   GA+V++ D+  +  E   K +            V CDVT+  D++  + TAV ++G LD+M NNAG   +     +  +Q  F+++++++L G + GT+ AA +M+   RG+I++ +SV G +G      Y+++K G++G+ K  A EL   GIRVN ++P ++ + + +    ++ D  L  +     G   EP ++A  A++L SD S  ++G  L V GG
Sbjct:    5 LNARTAVITGGAQGLGLAIGQRFVAEGARVVLGDVNLEATEVAAKRLGGDDVALA----VRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRDATMRTMTEEQ--FDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQKLAEVPMGRAG---EPSEVASVAVFLASDLSSYMTGTVLDVTGG 244          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: LINX_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linX PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.733e-30
Identity = 84/254 (33.07%), Postives = 140/254 (55.12%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAI 847
            RL GKVALITGGA G+G   A+ F++ GAKV+I D+ +++ + V  +I           ++  DVT      NA+  AV  +G L  + N AG    + P   + +  E + +++++N    FLG K A   +  +G GSII+ +S+ G+   A   +Y ++K  +  + K  A+E    G+RVN + P  ++TP+  +   +  D L    S +  G + +P DIA  AL+L SDE+K ++G +L +DGG+++
Sbjct:    4 RLAGKVALITGGASGLGAAQAKRFAEEGAKVVIGDLNEEMAKGVVAEI---RAAGGDALFIRLDVTDAASWNNAIAAAVDGFGGLTTLSNTAGI---IHPGGFEEESIEGWNKMVAVNQTAIFLGIKAAIPELVKSGNGSIINISSLIGMFPTAGNASYCATKAAVRIMSKAAALEFVDRGVRVNTIVPGGMNTPITAN---VPPDVLKQQTSQIPMGKLGDPIDIANGALFLASDEAKYITGVDLPIDGGWSV 248          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.860e-30
Identity = 85/252 (33.73%), Postives = 136/252 (53.97%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFL-KLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFA 844
            L  K A++TGG+RGIG   A+LF++HGA V I  I ++ G+S  +D+            V  DV+K   +   V   + +YG +D++ NNAG T D +   ++   + E+  ++  NL   +       R M  A  G+I++ +S+ G+ G      YA++K G++G  K  + E+G   IRVNC++P  + T + K     L ++ L G+     G V  PE+IA AAL+L S++S  ++G  L VDGG A
Sbjct:    5 LVNKAAIVTGGSRGIGFGIAKLFAEHGANVQIWGINEEAGKSAAQDLSDKTGSKVSFALV--DVSKNDMVSAQVQKFLAEYGTIDVVVNNAGITRDSL---LMRMSEEEWSSVIDTNLGSIYNVCSAVIRPMIKARSGAIVNISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKGLSDNLKNEWLKGV---PLGRVGTPEEIAMAALFLASNQSSYITGQVLSVDGGMA 248          
The following BLAST results are available for this feature:
BLAST of CK933903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
YXJF_BACSU6.363e-3334.75Uncharacterized oxidoreductase yxjF OS=Bacillus su... [more]
LVR_LEIAQ1.417e-3233.59Levodione reductase OS=Leifsonia aquatica GN=lvr P... [more]
FABG_THEMA1.851e-3234.783-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
LINC_PSEPA2.418e-3234.502,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
YXBG_BACSU1.200e-3133.73Uncharacterized oxidoreductase yxbG OS=Bacillus su... [more]
BACC_BACAM1.567e-3134.24Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
Y1385_MYCBO2.047e-3131.73Uncharacterized oxidoreductase Mb1385 OS=Mycobacte... [more]
Y1350_MYCTU2.047e-3131.73Uncharacterized oxidoreductase Rv1350/MT1393 OS=My... [more]
LINX_PSEPA1.733e-3033.072,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
FABG_CHLMU3.860e-3033.733-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_H07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933903 ID=CK933903; Name=CK933903; organism=Citrus sinensis; type=EST; length=854bp
GGGGCAAGACACCATAACTTACCTTCATATTTTGGTTGCTGTGCGTGCTA
TAAGAATGGGCAGTGCTTCAGTTGTCTCAGCTGCAGCAAGAAGGCTACAA
GGCAAAGTGGCACTTATCACAGGAGGAGCAAGAGGCATTGGGGAATGCAC
TGCAAGGCTCTTCTCAAAACATGGAGCTAAAGTACTCATTGCAGATATTA
AAGATGACTTGGGCGAATCTGTATGCAAAGACATAGGCTCTTCATCATCA
TCAGCCAGCGGCTGCTCCTATGTCCATTGTGATGTAACCAAAGAGAAAGA
TATCGAAAACGCCGTTAACACGGCAGTCACTCAGTACGGAAAGCTAGACA
TTATGTTCAATAACGCCGGCACTGTGGATGAAGTCAAACCTAACATACTC
GATAACGATCAGGCTGAATTTGAGCGCATACTTTCCATTAACCTCGTTGG
CGCATTTTTGGGGACGAAACATGCTGCTAGGGTGATGAAACCCGCCGGAC
GAGGCAGCATAATTTCAACTGCGAGCGTTTGCGGAATCATTGGTGGCGCT
GCAACACATGCATACGCTAGTTCAAAGCATGGCCTTTTGGGGCTGATGAA
GAATACTGCTGTGGAGCTTGGACGATTTGGCATTAGGGTCAATTGTGTGT
CACCTTATGTGGTCTCAACTCCATTAGCTAAGGATTTTCTCAAGCTTGCT
GATGATGGTTTGGGCGGCATGTATTCAAATCTTAAGGGGGCTGTTCTTGA
GCCTGAGGATATAGCTGAAGCTGCTCTTTATTTGGGGAGTGATGAGTCTA
AGTGTGTGAGTGGGCATAATTTGGTCGTAGATGGAGGATTTGCTATTGTC
AATG
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